BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010482
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   115   2e-23
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              115   2e-23
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   110   5e-22
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   109   1e-21
ref|XP_003537767.1| PREDICTED: DNA-directed RNA polymerase III s...   109   1e-21

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  115 bits (288), Expect = 2e-23
 Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 17/163 (10%)
 Frame = -3

Query: 1121 TPPVKTVISDKSREGLSKAIEKLLHTHKVCTFXXXXXXXXXXXLE--------------- 987
            TP  +T +S ++RE L KA+E++   HKVC+F           +                
Sbjct: 510  TPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAA 569

Query: 986  --APPPPESELRGIIKEVAIDIHGVFVSKTTPEHSYDGLRRTVIDLLIVEGPNAKLRKAA 813
                  P+ EL  II + A  +HGV+V KT+    ++ LR+ V+DL   + PNAKL++A 
Sbjct: 570  AYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRAD 629

Query: 812  IVEAGKIRLKRADIPTIEYNKVMHEFCVSRGSFWMLKPGDGSP 684
            I+EA KI LK+ +I T EYNKV+ E C SRGS W+LK GDG P
Sbjct: 630  IMEAAKIALKK-EITTHEYNKVVSELCESRGSLWVLKSGDGKP 671


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  115 bits (288), Expect = 2e-23
 Identities = 65/163 (39%), Positives = 91/163 (55%), Gaps = 17/163 (10%)
 Frame = -3

Query: 1121 TPPVKTVISDKSREGLSKAIEKLLHTHKVCTFXXXXXXXXXXXLE--------------- 987
            TP  +T +S ++RE L KA+E++   HKVC+F           +                
Sbjct: 526  TPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAA 585

Query: 986  --APPPPESELRGIIKEVAIDIHGVFVSKTTPEHSYDGLRRTVIDLLIVEGPNAKLRKAA 813
                  P+ EL  II + A  +HGV+V KT+    ++ LR+ V+DL   + PNAKL++A 
Sbjct: 586  AYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRAD 645

Query: 812  IVEAGKIRLKRADIPTIEYNKVMHEFCVSRGSFWMLKPGDGSP 684
            I+EA KI LK+ +I T EYNKV+ E C SRGS W+LK GDG P
Sbjct: 646  IMEAAKIALKK-EITTHEYNKVVSELCESRGSLWVLKSGDGKP 687


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
            sativus]
          Length = 702

 Score =  110 bits (276), Expect = 5e-22
 Identities = 68/162 (41%), Positives = 92/162 (56%), Gaps = 21/162 (12%)
 Frame = -3

Query: 1109 KTVISDKSREGLSKAIEKLLHTHKVCTF--------------------XXXXXXXXXXXL 990
            K  +SD++RE L KA++KL   HKVC+F                               +
Sbjct: 543  KGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGV 602

Query: 989  EAPPPPESELRGIIKEVAIDIHGVFVSKTTPEH-SYDGLRRTVIDLLIVEGPNAKLRKAA 813
            +APP    EL+ II +VA +IHG++V  ++PEH  YD LR+ VI LL   GP A L+KA 
Sbjct: 603  DAPP---DELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKAD 659

Query: 812  IVEAGKIRLKRADIPTIEYNKVMHEFCVSRGSFWMLKPGDGS 687
            ++EA K  L RA I + EY+KVM+E C+S GS W LK GDG+
Sbjct: 660  VLEASKHELGRA-INSNEYSKVMNEICISHGSSWTLKSGDGN 700


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  109 bits (273), Expect = 1e-21
 Identities = 68/162 (41%), Positives = 91/162 (56%), Gaps = 21/162 (12%)
 Frame = -3

Query: 1109 KTVISDKSREGLSKAIEKLLHTHKVCTF--------------------XXXXXXXXXXXL 990
            K  +SD++RE L KA++KL   HKVC+F                               +
Sbjct: 543  KGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGV 602

Query: 989  EAPPPPESELRGIIKEVAIDIHGVFVSKTTPEH-SYDGLRRTVIDLLIVEGPNAKLRKAA 813
            +APP    EL  II +VA +IHG++V  ++PEH  YD LR+ VI LL   GP A L+KA 
Sbjct: 603  DAPP---DELXKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKAD 659

Query: 812  IVEAGKIRLKRADIPTIEYNKVMHEFCVSRGSFWMLKPGDGS 687
            ++EA K  L RA I + EY+KVM+E C+S GS W LK GDG+
Sbjct: 660  VLEASKHELGRA-INSNEYSKVMNEICISHGSSWTLKSGDGN 700


>ref|XP_003537767.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
            max]
          Length = 680

 Score =  109 bits (272), Expect = 1e-21
 Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 17/166 (10%)
 Frame = -3

Query: 1133 SVRTTPPVKTVISDKSREGLSKAIEKLLHTHKVCTFXXXXXXXXXXXLEAP--------- 981
            S+   PP K  +S+++R  L  A++KL  THKVC+F           +            
Sbjct: 518  SLGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGLREMAVSKAMLSKGDSKM 577

Query: 980  --------PPPESELRGIIKEVAIDIHGVFVSKTTPEHSYDGLRRTVIDLLIVEGPNAKL 825
                      P +EL  +I EVA +I+G +V K++P+   D  R  VID+L   GPNAKL
Sbjct: 578  AVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPD---DPFRDVVIDMLCGSGPNAKL 634

Query: 824  RKAAIVEAGKIRLKRADIPTIEYNKVMHEFCVSRGSFWMLKPGDGS 687
            +KA I+EA + +L R ++ + EY KVM E CVS+GS W+LK GDGS
Sbjct: 635  KKAEILEAARRKLGR-EVASNEYTKVMSELCVSKGSVWVLKSGDGS 679