BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010475
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arab...   399   e-133
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   400   e-133
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops...   397   e-133
gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 190...   397   e-133
gb|ABU45190.1| unknown [Capsicum frutescens]                          394   e-132

>ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
            lyrata] gi|297333961|gb|EFH64379.1| hypothetical protein
            ARALYDRAFT_475241 [Arabidopsis lyrata subsp. lyrata]
          Length = 589

 Score =  399 bits (1024), Expect(2) = e-133
 Identities = 205/307 (66%), Positives = 231/307 (75%), Gaps = 3/307 (0%)
 Frame = +3

Query: 6    ASGQLPEVPQA--VPGMFQNMFPFGTAQ-MGALPIMPAQAMTQQATRHARRVYVGGLPPL 176
            A+GQ+P VP    +PGMF NMFP    Q +GALP++P QAMTQQATRHARRVYVGGLPP 
Sbjct: 206  AAGQVPSVPTTATIPGMFPNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPT 265

Query: 177  ANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGII 356
            ANEQ++ATFFS +M+AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII
Sbjct: 266  ANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 325

Query: 357  FEGVSVRVRRPTDYNPTLAAALGPSQPNPHXXXXXXXXXXXXXXXXXXPDRIFVGGLPYY 536
             EGV V+VRRPTDYNP+LAA LGPSQPNP+                  PDRIFVGGLPYY
Sbjct: 326  LEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVGLSSGSTGGLEGPDRIFVGGLPYY 385

Query: 537  FTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATDVACAALNGLKMGDKT 716
            FTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D   TD+ACAALNG+KMGDKT
Sbjct: 386  FTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKT 445

Query: 717  LTVRRATISNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGVGTGPVEDAATPTKVL 896
            LTVRRA     Q K EQE             ++ LQ GG               TPTK++
Sbjct: 446  LTVRRAIQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGG---------------TPTKIV 490

Query: 897  CLTEVIT 917
            CLT+V+T
Sbjct: 491  CLTQVVT 497



 Score =  105 bits (263), Expect(2) = e-133
 Identities = 47/71 (66%), Positives = 57/71 (80%)
 Frame = +1

Query: 1024 EGGKFGDLISVVIPRPSPSGEQIEGLGKVFLEYADTTGCSNARDALSGRKFGGNSVVAVY 1203
            EGGKFG+L++VVIPRP+P  +   G+GKVFLEYAD  G S AR  ++GRKFGGN VVAVY
Sbjct: 517  EGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVY 576

Query: 1204 YPEDKFYDGEY 1236
            YPEDK+  G+Y
Sbjct: 577  YPEDKYLQGDY 587


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  400 bits (1027), Expect(2) = e-133
 Identities = 206/305 (67%), Positives = 229/305 (75%), Gaps = 1/305 (0%)
 Frame = +3

Query: 6    ASGQLPEVPQAVPGMFQNMFPFGTAQM-GALPIMPAQAMTQQATRHARRVYVGGLPPLAN 182
            ASGQ+      +PGMF NMFP GT+Q  GALP+MP QAMTQQATRHARRVYVGGLPP AN
Sbjct: 156  ASGQIAGTTPPIPGMFPNMFPLGTSQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTAN 215

Query: 183  EQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFE 362
            EQ++ATFFS +M AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGIIFE
Sbjct: 216  EQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFE 275

Query: 363  GVSVRVRRPTDYNPTLAAALGPSQPNPHXXXXXXXXXXXXXXXXXXPDRIFVGGLPYYFT 542
            G  V+VRRP+DYNP+LAA LGPSQPNP+                  PDRIFVGGLPYYFT
Sbjct: 276  GAPVKVRRPSDYNPSLAATLGPSQPNPNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFT 335

Query: 543  EVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATDVACAALNGLKMGDKTLT 722
            E QIRELLESFGPLRGFDLVKDR+TGNSKGY FCVY+D   TD+ACAALNG+KMGDKTLT
Sbjct: 336  ESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLT 395

Query: 723  VRRATISNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGVGTGPVEDAATPTKVLCL 902
            VRRA     Q K EQE+            ++ LQ      P     PV     PTKV+CL
Sbjct: 396  VRRANQGTNQPKPEQENVLLHAQQQIALQRLMLQ------PQPQQQPV-----PTKVVCL 444

Query: 903  TEVIT 917
            T+V+T
Sbjct: 445  TQVVT 449



 Score =  102 bits (255), Expect(2) = e-133
 Identities = 48/71 (67%), Positives = 56/71 (78%)
 Frame = +1

Query: 1024 EGGKFGDLISVVIPRPSPSGEQIEGLGKVFLEYADTTGCSNARDALSGRKFGGNSVVAVY 1203
            E GKFG L++VVIPRP P+GE   G+GKVFLEYADT G S AR  ++GRKF GN VVAV+
Sbjct: 469  EAGKFGLLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMNGRKFDGNQVVAVF 528

Query: 1204 YPEDKFYDGEY 1236
            YPE+KF  GEY
Sbjct: 529  YPENKFSQGEY 539


>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
            gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
            Full=Splicing factor U2af large subunit B; AltName:
            Full=U2 auxiliary factor 65 kDa subunit B; AltName:
            Full=U2 small nuclear ribonucleoprotein auxiliary factor
            large subunit B; Short=U2 snRNP auxiliary factor large
            subunit B gi|332195625|gb|AEE33746.1| Splicing factor
            U2af large subunit B [Arabidopsis thaliana]
          Length = 589

 Score =  397 bits (1019), Expect(2) = e-133
 Identities = 203/307 (66%), Positives = 230/307 (74%), Gaps = 3/307 (0%)
 Frame = +3

Query: 6    ASGQLPEVPQA--VPGMFQNMFPFGTAQ-MGALPIMPAQAMTQQATRHARRVYVGGLPPL 176
            A+GQ+P VP    +PGMF NMFP    Q +GALP++P QAMTQQATRHARRVYVGGLPP 
Sbjct: 206  AAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPT 265

Query: 177  ANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGII 356
            ANEQ+++TFFS +M+AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII
Sbjct: 266  ANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 325

Query: 357  FEGVSVRVRRPTDYNPTLAAALGPSQPNPHXXXXXXXXXXXXXXXXXXPDRIFVGGLPYY 536
             EGV V+VRRPTDYNP+LAA LGPSQPNP+                  PDRIFVGGLPYY
Sbjct: 326  LEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYY 385

Query: 537  FTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATDVACAALNGLKMGDKT 716
            FTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D   TD+ACAALNG+KMGDKT
Sbjct: 386  FTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKT 445

Query: 717  LTVRRATISNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGVGTGPVEDAATPTKVL 896
            LTVRRA     Q K EQE             ++  Q GG               TPTK++
Sbjct: 446  LTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGG---------------TPTKIV 490

Query: 897  CLTEVIT 917
            CLT+V+T
Sbjct: 491  CLTQVVT 497



 Score =  105 bits (262), Expect(2) = e-133
 Identities = 47/71 (66%), Positives = 57/71 (80%)
 Frame = +1

Query: 1024 EGGKFGDLISVVIPRPSPSGEQIEGLGKVFLEYADTTGCSNARDALSGRKFGGNSVVAVY 1203
            EGGKFG+L++VVIPRP+P  +   G+GKVFLEYAD  G S AR  ++GRKFGGN VVAVY
Sbjct: 517  EGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVY 576

Query: 1204 YPEDKFYDGEY 1236
            YPEDK+  G+Y
Sbjct: 577  YPEDKYAQGDY 587


>gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
            thaliana]
          Length = 568

 Score =  397 bits (1019), Expect(2) = e-133
 Identities = 203/307 (66%), Positives = 230/307 (74%), Gaps = 3/307 (0%)
 Frame = +3

Query: 6    ASGQLPEVPQA--VPGMFQNMFPFGTAQ-MGALPIMPAQAMTQQATRHARRVYVGGLPPL 176
            A+GQ+P VP    +PGMF NMFP    Q +GALP++P QAMTQQATRHARRVYVGGLPP 
Sbjct: 185  AAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQATRHARRVYVGGLPPT 244

Query: 177  ANEQTIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGII 356
            ANEQ+++TFFS +M+AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDGII
Sbjct: 245  ANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 304

Query: 357  FEGVSVRVRRPTDYNPTLAAALGPSQPNPHXXXXXXXXXXXXXXXXXXPDRIFVGGLPYY 536
             EGV V+VRRPTDYNP+LAA LGPSQPNP+                  PDRIFVGGLPYY
Sbjct: 305  LEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGSTGGLEGPDRIFVGGLPYY 364

Query: 537  FTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATDVACAALNGLKMGDKT 716
            FTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D   TD+ACAALNG+KMGDKT
Sbjct: 365  FTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAALNGIKMGDKT 424

Query: 717  LTVRRATISNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGVGTGPVEDAATPTKVL 896
            LTVRRA     Q K EQE             ++  Q GG               TPTK++
Sbjct: 425  LTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGG---------------TPTKIV 469

Query: 897  CLTEVIT 917
            CLT+V+T
Sbjct: 470  CLTQVVT 476



 Score =  105 bits (262), Expect(2) = e-133
 Identities = 47/71 (66%), Positives = 57/71 (80%)
 Frame = +1

Query: 1024 EGGKFGDLISVVIPRPSPSGEQIEGLGKVFLEYADTTGCSNARDALSGRKFGGNSVVAVY 1203
            EGGKFG+L++VVIPRP+P  +   G+GKVFLEYAD  G S AR  ++GRKFGGN VVAVY
Sbjct: 496  EGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVY 555

Query: 1204 YPEDKFYDGEY 1236
            YPEDK+  G+Y
Sbjct: 556  YPEDKYAQGDY 566


>gb|ABU45190.1| unknown [Capsicum frutescens]
          Length = 551

 Score =  394 bits (1011), Expect(2) = e-132
 Identities = 200/303 (66%), Positives = 223/303 (73%)
 Frame = +3

Query: 9    SGQLPEVPQAVPGMFQNMFPFGTAQMGALPIMPAQAMTQQATRHARRVYVGGLPPLANEQ 188
            +GQ+P    ++PGMF NMFP    Q GALPIMP QAMTQQATRHARRVYVGGLPP ANEQ
Sbjct: 172  TGQVPGANPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 231

Query: 189  TIATFFSHIMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGIIFEGV 368
            ++ATFFSH+M AIGGN+AGPGDAVVNVYINHEKKFAFVEMR+VEEASNAMALDG+IFEG 
Sbjct: 232  SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGG 291

Query: 369  SVRVRRPTDYNPTLAAALGPSQPNPHXXXXXXXXXXXXXXXXXXPDRIFVGGLPYYFTEV 548
             V+VRRP+DYNP+LAA LGPSQP+P+                  PDRIFVGGLPYYFTE 
Sbjct: 292  PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTES 351

Query: 549  QIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQGATDVACAALNGLKMGDKTLTVR 728
            QIRELLESFG LRGFDLVKDR+TGNSKGY FCVY+D   TD+ACAALNG+KMGDKTLTVR
Sbjct: 352  QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 411

Query: 729  RATISNGQVKSEQESXXXXXXXXXXXXKMALQVGGVNLPGVGTGPVEDAATPTKVLCLTE 908
            RA     Q   EQES            +  LQ G               A  TKVLCLT+
Sbjct: 412  RANQGTNQPNPEQESVLLHAQQQIALQRFMLQPG---------------ALATKVLCLTQ 456

Query: 909  VIT 917
            V++
Sbjct: 457  VVS 459



 Score =  106 bits (265), Expect(2) = e-132
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = +1

Query: 1024 EGGKFGDLISVVIPRPSPSGEQIEGLGKVFLEYADTTGCSNARDALSGRKFGGNSVVAVY 1203
            E GKFG L++VVIPRP+PSGE   GLGKVFLEYAD    S AR  L+GRKFGGN V+AV+
Sbjct: 479  ECGKFGSLLNVVIPRPNPSGEPTPGLGKVFLEYADVESSSRARQGLNGRKFGGNEVIAVF 538

Query: 1204 YPEDKFYDGEYGA 1242
            YPE+KF +GEY A
Sbjct: 539  YPENKFSEGEYEA 551