BLASTX nr result

ID: Bupleurum21_contig00010465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010465
         (1466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossyp...   374   e-101
gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium ...   371   e-100
ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Popu...   369   1e-99
ref|XP_002522745.1| conserved hypothetical protein [Ricinus comm...   362   2e-97
ref|XP_002267825.1| PREDICTED: fasciclin-like arabinogalactan pr...   357   4e-96

>gb|ABV27490.1| fasciclin-like arabinogalactan protein 19 [Gossypium hirsutum]
          Length = 398

 Score =  374 bits (960), Expect = e-101
 Identities = 205/393 (52%), Positives = 260/393 (66%), Gaps = 9/393 (2%)
 Frame = -1

Query: 1370 TICLLLLFVTTSTTEAHNITRILAKHPEFSTFNHYLTITHLAAEINRRLTITVCAVDNEA 1191
            T   LLL +  ST+ AHNITRILAKHPEFSTFNHYLT+THLA+EINRR TITV A++N A
Sbjct: 6    TALFLLLLLLFSTSNAHNITRILAKHPEFSTFNHYLTLTHLASEINRRETITVLALNNAA 65

Query: 1190 MSDLLAKHLSIFTIKNVLALHVFSDYFGNKKLHQITHRSTLTATMFQATGKAEGTSGYVN 1011
            MS LL+K LS++T+KNVL+LHV  DYFG+KKLHQIT+ + LT+TMFQA+G A G+SGY+N
Sbjct: 66   MSSLLSKQLSLYTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSSGYIN 125

Query: 1010 ITDVKGGHVGFAPEDNAGKFESFFVKSVLEKPYNISVIQISKLL-XXXXXXXXXXXXSVN 834
            ITD+KGG VGF  E+N G  ++ +VKSV E PYNISV+QIS++L              +N
Sbjct: 126  ITDLKGGKVGFGAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEPSKLN 185

Query: 833  VADIMKTKGCKAFSDLLTSENAMDTFAQTVDAGLTIFCPSDEVLKAFMPTYKNLTEEGKM 654
            + +IM  +GCK+F+DLL S  A  TF + +D GLT+FCP+D V+K FMP YKNLT   K 
Sbjct: 186  LTEIMSKQGCKSFADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTASKKA 245

Query: 653  LLLLYHGVADYNSMGTLRSHNGVINTLAIVGTSSYNYTLHNXXXXXXXXXXXXXXTIIGT 474
             LLLYHGV  Y SM  L+S+NG++NTLA  G + Y++T+ N               I GT
Sbjct: 246  SLLLYHGVPVYQSMQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAKITGT 305

Query: 473  LVDEEPLAVYKIDKVLLPRELFN-VEAP-------KGKKXXXXXXXXXXXXXXXXXXXXX 318
            L DEEPL VYKI+KVLLPREL+  VEAP       K K                      
Sbjct: 306  LKDEEPLIVYKINKVLLPRELYKPVEAPAESPKPSKSKSKSKHKVADAPESDAPAESDPA 365

Query: 317  XDQTASDDNSASMIIGGVRMITMVLLGMSLGGL 219
             DQTA +D+  + + G  R + MV+L + +G L
Sbjct: 366  DDQTADNDSGVAGLDG--RRLVMVMLSLCIGVL 396


>gb|ACL36352.1| fascilin-like arabinogalactan protein [Gossypium hirsutum]
          Length = 397

 Score =  371 bits (952), Expect = e-100
 Identities = 204/397 (51%), Positives = 261/397 (65%), Gaps = 9/397 (2%)
 Frame = -1

Query: 1382 LSGFTICLLLLFVTTSTTEAHNITRILAKHPEFSTFNHYLTITHLAAEINRRLTITVCAV 1203
            +S  T  L  L +  ST+ AHNITRILAK+PEFSTFNHYLT+THLA+EINRR TITV A+
Sbjct: 1    MSPATTALFFLLLLFSTSNAHNITRILAKNPEFSTFNHYLTLTHLASEINRRETITVLAL 60

Query: 1202 DNEAMSDLLAKHLSIFTIKNVLALHVFSDYFGNKKLHQITHRSTLTATMFQATGKAEGTS 1023
            +N AMS LL+K LS++T+KNVL+LHV  DYFG+KKLHQIT+ + LT+TMFQA+G A G+S
Sbjct: 61   NNAAMSSLLSKQLSLYTLKNVLSLHVLVDYFGSKKLHQITNGTALTSTMFQASGAAPGSS 120

Query: 1022 GYVNITDVKGGHVGFAPEDNAGKFESFFVKSVLEKPYNISVIQISKLL-XXXXXXXXXXX 846
            GY+NITD+KGG VGF  E+N G  ++ +VKSV E PYNISV+QIS++L            
Sbjct: 121  GYINITDLKGGKVGFGAENNDGNLDAVYVKSVAEIPYNISVLQISQVLNSAEAEAPTAEP 180

Query: 845  XSVNVADIMKTKGCKAFSDLLTSENAMDTFAQTVDAGLTIFCPSDEVLKAFMPTYKNLTE 666
              +N+ +IM  +GCKAF+DLL S  A  TF + +D GLT+FCP+D V+K FMP YKNLT 
Sbjct: 181  SKLNLTEIMSKQGCKAFADLLISSGADATFNENIDGGLTVFCPTDPVIKDFMPKYKNLTA 240

Query: 665  EGKMLLLLYHGVADYNSMGTLRSHNGVINTLAIVGTSSYNYTLHNXXXXXXXXXXXXXXT 486
              K  LLLYHGV  Y SM  L+S+NG++NTLA  G + Y++T+ N               
Sbjct: 241  SKKASLLLYHGVPVYQSMQMLKSNNGIMNTLATDGANKYDFTIQNDGEVVTLETKVMTAK 300

Query: 485  IIGTLVDEEPLAVYKIDKVLLPRELFN-VEAP-------KGKKXXXXXXXXXXXXXXXXX 330
            I GTL DEEPL VYKI+KVLLPREL+  VEAP       K K                  
Sbjct: 301  ITGTLKDEEPLIVYKINKVLLPRELYKPVEAPAESPKPSKSKSKSKHKVADAPESDAPAE 360

Query: 329  XXXXXDQTASDDNSASMIIGGVRMITMVLLGMSLGGL 219
                 DQTA +D+  + + G  R + M++L + +G L
Sbjct: 361  SDPADDQTADNDSGVAGLDG--RRLVMMMLSLCIGVL 395


>ref|XP_002320524.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]
            gi|222861297|gb|EEE98839.1| fasciclin-like
            arabinogalactan protein [Populus trichocarpa]
          Length = 344

 Score =  369 bits (946), Expect = 1e-99
 Identities = 188/332 (56%), Positives = 234/332 (70%), Gaps = 6/332 (1%)
 Frame = -1

Query: 1358 LLLFVTTSTTEAHNITRILAKHPEFSTFNHYLTITHLAAEINRRLTITVCAVDNEAMSDL 1179
            L+L  +T+T  AHNITRILAKHP+FSTFNHYLT+THLAAEINRR TITV A+DN AMS L
Sbjct: 5    LVLLASTTTVNAHNITRILAKHPQFSTFNHYLTVTHLAAEINRRQTITVLALDNAAMSSL 64

Query: 1178 LAKHLSIFTIKNVLALHVFSDYFGNKKLHQITHRSTLTATMFQATGKAEGTSGYVNITDV 999
            ++K LS++T++NVL+LHV  DYFG +KLHQIT+ + LTATMFQATG A G SGYVNITD+
Sbjct: 65   ISKQLSVYTLRNVLSLHVLVDYFGTRKLHQITNGTELTATMFQATGSAPGASGYVNITDL 124

Query: 998  KGGHVGFAPEDNAGKFESFFVKSVLEKPYNISVIQISKLLXXXXXXXXXXXXSVNVADIM 819
             GG V F  EDN GK  + +VKS+ E PYNIS++QIS+ L            ++NV  I+
Sbjct: 125  NGGKVAFGAEDNDGKLNAVYVKSLEEIPYNISILQISQPLNSAEAEAPTAAPTLNVTAIL 184

Query: 818  KTKGCKAFSDLLTSENAMDTFAQTVDAGLTIFCPSDEVLKAFMPTYKNLTEEGKMLLLLY 639
              +GCKAFSDLL +  A  TF + VD GLT+FCP+D V+  FMP YKNLT   K+ LLLY
Sbjct: 185  SNQGCKAFSDLLIASGAHTTFEENVDGGLTVFCPTDPVINGFMPKYKNLTAPQKVSLLLY 244

Query: 638  HGVADYNSMGTLRSHNGVINTLAIVGTSSYNYTLHNXXXXXXXXXXXXXXTIIGTLVDEE 459
            HG+  Y S+  L++ NG++NTLA  G + Y++T+ N              TI GT+ DEE
Sbjct: 245  HGIPIYQSLQMLKTSNGIMNTLATNGANKYDFTVQNDGEVVTLETKVTTATITGTVKDEE 304

Query: 458  PLAVYKIDKVLLPRELF------NVEAPKGKK 381
            PL VYKI+KVLLPRELF         APKG+K
Sbjct: 305  PLVVYKINKVLLPRELFKAAPEKKAPAPKGEK 336


>ref|XP_002522745.1| conserved hypothetical protein [Ricinus communis]
            gi|223537983|gb|EEF39596.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  362 bits (928), Expect = 2e-97
 Identities = 189/338 (55%), Positives = 233/338 (68%), Gaps = 5/338 (1%)
 Frame = -1

Query: 1391 MKLLSGFTICLLLLFVTTST---TEAHNITRILAKHPEFSTFNHYLTITHLAAEINRRLT 1221
            M+L +  +  LLLL  +TST   T AHNITR+L+ HP FSTFNHYLTITHLA EINRR T
Sbjct: 1    MRLSALLSFLLLLLLFSTSTLTLTNAHNITRLLSHHPSFSTFNHYLTITHLADEINRRTT 60

Query: 1220 ITVCAVDNEAMSDLLAKHLSIFTIKNVLALHVFSDYFGNKKLHQITHRSTLTATMFQATG 1041
            ITVCA+DN AMS LL+KH SI+TIKN+L+LHV  DYFG KKLHQIT+ + L ATMFQATG
Sbjct: 61   ITVCAIDNTAMSALLSKHPSIYTIKNMLSLHVLLDYFGAKKLHQITNGTALAATMFQATG 120

Query: 1040 KAEGTSGYVNITDVKGGHVGFAPEDNAGKFESFFVKSVLEKPYNISVIQISKLL-XXXXX 864
             A G+SG+VNITD+KGG V F PEDN G    FFVKS+ E PYNIS+IQIS  L      
Sbjct: 121  SAPGSSGFVNITDIKGGKVAFGPEDNDGNLGVFFVKSLEEVPYNISIIQISNFLPSDVAA 180

Query: 863  XXXXXXXSVNVADIMKTKGCKAFSD-LLTSENAMDTFAQTVDAGLTIFCPSDEVLKAFMP 687
                    +N+ D+M   GCK F+D LL +  A  T+   +D GLT+FCP D+  KAF+P
Sbjct: 181  APTPEPSRMNLTDMMSAHGCKFFADTLLANPEASSTYQDNIDGGLTVFCPLDDPFKAFLP 240

Query: 686  TYKNLTEEGKMLLLLYHGVADYNSMGTLRSHNGVINTLAIVGTSSYNYTLHNXXXXXXXX 507
             YKNLT  GK+  L + GV  Y S+  L+S+NGV+NTLA  G + +++T+ N        
Sbjct: 241  KYKNLTAAGKVSFLEFFGVPIYQSLSMLKSNNGVMNTLATDGANKFDFTVQNDGEDVTLK 300

Query: 506  XXXXXXTIIGTLVDEEPLAVYKIDKVLLPRELFNVEAP 393
                   IIGTL+DE+PLA+Y I+KVLLP+ELF  EAP
Sbjct: 301  TKTATAKIIGTLIDEQPLAIYTINKVLLPKELFKAEAP 338


>ref|XP_002267825.1| PREDICTED: fasciclin-like arabinogalactan protein 1-like [Vitis
            vinifera]
          Length = 405

 Score =  357 bits (916), Expect = 4e-96
 Identities = 187/339 (55%), Positives = 229/339 (67%), Gaps = 6/339 (1%)
 Frame = -1

Query: 1391 MKLLSGFTICLLL-----LFVTTSTTEAHNITRILAKHPEFSTFNHYLTITHLAAEINRR 1227
            M+LL G    L+L     L +    TEAHNIT ILAK+PEFSTFNHYLT+THLA EIN R
Sbjct: 1    MQLLPGSARTLMLSLSALLLLLCCATEAHNITSILAKNPEFSTFNHYLTVTHLANEINLR 60

Query: 1226 LTITVCAVDNEAMSDLLAKHLSIFTIKNVLALHVFSDYFGNKKLHQITHRSTLTATMFQA 1047
             TITVCAVDN  MSDLLAK LSI+ IKNVL+LH+  DYFG KKLHQIT+ + L ATM+QA
Sbjct: 61   ETITVCAVDNPGMSDLLAKGLSIYAIKNVLSLHILLDYFGAKKLHQITNGTALAATMYQA 120

Query: 1046 TGKAEGTSGYVNITDVKGGHVGFAPEDNAGKFESFFVKSVLEKPYNISVIQISKLL-XXX 870
            TG A G+SG+VNITD+KGG VGF    N G   + FVKSV E PYNISVIQISK+L    
Sbjct: 121  TGSAPGSSGFVNITDLKGGKVGFGAGGNDGDLTATFVKSVEEIPYNISVIQISKILPSEE 180

Query: 869  XXXXXXXXXSVNVADIMKTKGCKAFSDLLTSENAMDTFAQTVDAGLTIFCPSDEVLKAFM 690
                       N+  +M   GCK F+D L + +A  T+   ++ GLT+FCP D+V K+F+
Sbjct: 181  AEAPTPGPSEQNLTALMSAHGCKVFADTLVASDAQKTYEDNLEGGLTVFCPMDDVFKSFL 240

Query: 689  PTYKNLTEEGKMLLLLYHGVADYNSMGTLRSHNGVINTLAIVGTSSYNYTLHNXXXXXXX 510
            P YKNLT +GK+ LLLYHG+  Y S+  L+S NGV+NTLA  G   Y++T+ N       
Sbjct: 241  PKYKNLTADGKLSLLLYHGIPVYQSLSLLKSSNGVMNTLATDGAKKYDFTVQNDGEVVTL 300

Query: 509  XXXXXXXTIIGTLVDEEPLAVYKIDKVLLPRELFNVEAP 393
                    I GTL+DE+PL ++ IDKVLLP+ELF  EAP
Sbjct: 301  KTKIVTARITGTLLDEQPLGIFTIDKVLLPKELFKAEAP 339


Top