BLASTX nr result

ID: Bupleurum21_contig00010445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010445
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08175293.1| hypothetical protein HMPREF0523_1106 [Lactoba...    64   1e-08
ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853...    62   4e-08
ref|XP_001848188.1| predicted protein [Culex quinquefasciatus] g...    60   2e-07
emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]    56   3e-06

>ref|ZP_08175293.1| hypothetical protein HMPREF0523_1106 [Lactobacillus iners UPII
           60-B] gi|325477781|gb|EGC80917.1| hypothetical protein
           HMPREF0523_1106 [Lactobacillus iners UPII 60-B]
          Length = 156

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/92 (41%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
 Frame = -3

Query: 263 VWNWRRL---INWWFRFWFVYRNRRRLIYWWFGFWLVYGSWRRLINW-WFRLWLVYWSWR 96
           +W W RL   + +WFRFW  +R     +++WF FWL    W R   W WFR W  +W   
Sbjct: 4   LWLWFRLRFRLWFWFRFWLWFR-----LWFWFRFWLWL--WFRFWLWLWFRFWFRFWF-- 54

Query: 95  RLVNW-WLGFRFVYWSWRRLVNW---WLGFRF 12
           RL  W WL F F +W W  L  W   WL F F
Sbjct: 55  RLWLWLWLWFWFRFWFWLWLWLWLWLWLWFWF 86



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/123 (34%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
 Frame = -3

Query: 344 RNRWRMWFFKHXXXXXXXXXXXXWGTIVWNWRRLINW-WFRFWFVYRNRRRLIYW----- 183
           R R+R+WF+              +   +W W R   W WFRFWF +  R  L  W     
Sbjct: 9   RLRFRLWFWFRFWLWFRLWFWFRFW--LWLWFRFWLWLWFRFWFRFWFRLWLWLWLWFWF 66

Query: 182 --WFGFWLVYGSWRRLINWWFRLWLVYWSWRRLVNWWLGFRFVYWSWRRLVNW----WLG 21
             WF  WL    W  L  +WFRLWL  W W RL   W       W W  L  W    W  
Sbjct: 67  RFWFWLWLWLWLWLWLW-FWFRLWLWLWLWFRL---WFRLWLWLWLWLWLRRWAYWTWCW 122

Query: 20  FRF 12
           F F
Sbjct: 123 FSF 125


>ref|XP_003633295.1| PREDICTED: uncharacterized protein LOC100853570 [Vitis vinifera]
          Length = 421

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
 Frame = -3

Query: 260 WNWRRLINWWFRFWFVYRNRRRLIYWW---FGFWLVYGSWRRLINWWFRLWLVYWSWRRL 90
           W W R   WW+  W  +       +WW   + +W  +  WRR   WW R     W WRR 
Sbjct: 112 WWWPRWRTWWWPRWRTWWRTWWWTWWWPRRWRWWRTWWWWRRKGRWWRR--RPAWRWRRW 169

Query: 89  VNWWLGFRFVYWSWRRLVNWWLGFRFASR 3
             WW      +WSWRR   WW  +R A R
Sbjct: 170 RTWWW-----WWSWRRA--WWWSWRRAWR 191



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 22/108 (20%)
 Frame = -3

Query: 260 WNWRRLINWWFRFWFVYRNRRRLIYWWFGFWLVYGSWRRLINWW----------FRLWLV 111
           W W R   WW  +W+ +   RR  +W   +W     WRR   WW          +R W  
Sbjct: 120 WWWPRWRTWWRTWWWTWWWPRRWRWWRTWWW-----WRRKGRWWRRRPAWRWRRWRTWWW 174

Query: 110 YWSWRRLVNWWLGFRFVY-----WSWR-------RLVNWWLGFRFASR 3
           +WSWRR   WW  +R  +     WSWR       R   WW  +R   R
Sbjct: 175 WWSWRRA--WWWSWRRAWRWRWWWSWRWRRKRRWRKGRWWWPWRRGRR 220



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
 Frame = -3

Query: 338 RWRMWFFKHXXXXXXXXXXXXWGTIVWNWRRLINWWFRF--WF----VYRNRRRLIYWWF 177
           RWR W++              W    W W R   WW R   W+     +R RR   +WW+
Sbjct: 116 RWRTWWWPRWRTWWRTWWWTWWWPRRWRWWRTWWWWRRKGRWWRRRPAWRWRRWRTWWWW 175

Query: 176 GFW--LVYGSWRRLINWWFRLWLVYWSWRRLVNWWLGFRFVYWSWRRLVNW 30
             W    + SWRR   W    W   W WRR   W  G R+ +W WRR   W
Sbjct: 176 WSWRRAWWWSWRRAWRW---RWWWSWRWRRKRRWRKG-RW-WWPWRRGRRW 221


>ref|XP_001848188.1| predicted protein [Culex quinquefasciatus]
           gi|167864435|gb|EDS27818.1| predicted protein [Culex
           quinquefasciatus]
          Length = 527

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = -3

Query: 257 NWRRLINW-WFRFWFVYRNRRRLIYWWFGFWLVYGSWRRLINW-WFRLWLVYWSWRRLVN 84
           +WR L+ W WF FWF +       ++WF FW  +  W     W WF  W  +W W     
Sbjct: 215 DWRTLLGWFWFWFWFWF-----WFWFWFWFWFWFWFWFWFWFWFWFWFWFWFWFWFWFWF 269

Query: 83  W-WLGFRFVYWSWRRLVNW-WLGFRF 12
           W W  F F +W W     W W  F F
Sbjct: 270 WFWFWFWFWFWFWFWFWFWFWFWFWF 295


>emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
 Frame = -3

Query: 338 RWRMWFFKHXXXXXXXXXXXXWGTIVWNWRRLINWWFRFWFVYRNRRRLIYWWFGFWLVY 159
           RWR W                 G ++ +WRR   WW           RL++ W+ +W V 
Sbjct: 180 RWRWW-----------------GLVLVDWRR--RWW-----------RLVFVWWWWWRVV 209

Query: 158 GSWRRLINWWF----RLWLVYWSWRRLV-----NWWLGFRFVYWSWRR--LVNW 30
             W  L+ WW+     +WL+ W W  LV      WW     ++W W R  LVNW
Sbjct: 210 HVW--LLRWWWWRVVHVWLLGWWWWGLVLVDRRRWWWRLVLIWWWWWRLILVNW 261


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