BLASTX nr result

ID: Bupleurum21_contig00010438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010438
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281...    57   7e-08
emb|CBI24294.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002266116.1| PREDICTED: transcription factor GAMYB-like [...    58   7e-07
emb|CAN63791.1| hypothetical protein VITISV_037981 [Vitis vinifera]    58   7e-07

>ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281634|gb|ABM53274.1|
           GAMYB-like2 [Solanum lycopersicum]
          Length = 504

 Score = 56.6 bits (135), Expect(2) = 7e-08
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -3

Query: 405 HDVDWTVYADPNTPLGQSDASVFSEYTPVSGSSLDEPQLV 286
           H  +W  + DP +PLG S ASVFSEYTP SGSS +EPQLV
Sbjct: 413 HMTEWGQHGDPISPLGHSAASVFSEYTPTSGSSSEEPQLV 452



 Score = 24.6 bits (52), Expect(2) = 7e-08
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 167 MVSPQPDILLDSNWYG 120
           ++ P+PD LL+SN +G
Sbjct: 478 LICPRPDFLLESNCFG 493


>emb|CBI24294.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = -3

Query: 438 VPGDVPYSALQHDVDWTVYADPNTPLGQSDASVFSEYTPVSGSSLDEPQLVQ 283
           V G++P +   ++ +W VY DP +PLG S ASVF+ +TP+SGSS DEPQ ++
Sbjct: 365 VVGNLPLNP--YEAEWNVYVDPTSPLGNSAASVFNVHTPISGSSPDEPQSIE 414


>ref|XP_002266116.1| PREDICTED: transcription factor GAMYB-like [Vitis vinifera]
          Length = 524

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = -3

Query: 438 VPGDVPYSALQHDVDWTVYADPNTPLGQSDASVFSEYTPVSGSSLDEPQLVQ 283
           V G++P +   ++ +W VY DP +PLG S ASVF+ +TP+SGSS DEPQ ++
Sbjct: 402 VVGNLPLNP--YEAEWNVYVDPTSPLGNSAASVFNVHTPISGSSPDEPQSIE 451


>emb|CAN63791.1| hypothetical protein VITISV_037981 [Vitis vinifera]
          Length = 460

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = -3

Query: 438 VPGDVPYSALQHDVDWTVYADPNTPLGQSDASVFSEYTPVSGSSLDEPQLVQ 283
           V G++P +   ++ +W VY DP +PLG S ASVF+ +TP+SGSS DEPQ ++
Sbjct: 402 VVGNLPLNP--YEAEWNVYVDPTSPLGNSAASVFNVHTPISGSSPDEPQSIE 451


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