BLASTX nr result

ID: Bupleurum21_contig00010436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010436
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   136   3e-30
ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   136   3e-30
emb|CBI18352.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_001765435.1| predicted protein [Physcomitrella patens sub...   136   3e-30
ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicag...   135   6e-30

>ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           21-like [Cucumis sativus]
          Length = 715

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/91 (73%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
 Frame = -2

Query: 557 VAGRGIDIPDVAHVINYDMPKKIGLYIRRIGR---AGKTGIATTFLTLDDTVVFYDLEKI 387
           VAGRGIDIPDVAHVINYDMP  I +Y  RIGR   AGKTG+ATTFLTL D+ VFYDL+++
Sbjct: 617 VAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLTLQDSEVFYDLKQM 676

Query: 386 LIQSNCCVPPELSRHKASRFKAGSIPGRPPK 294
           LIQSN  VPPEL+RH+AS+FK GSIP RPP+
Sbjct: 677 LIQSNSPVPPELARHEASKFKPGSIPDRPPR 707


>ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
           sativus]
          Length = 715

 Score =  136 bits (342), Expect = 3e-30
 Identities = 67/91 (73%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
 Frame = -2

Query: 557 VAGRGIDIPDVAHVINYDMPKKIGLYIRRIGR---AGKTGIATTFLTLDDTVVFYDLEKI 387
           VAGRGIDIPDVAHVINYDMP  I +Y  RIGR   AGKTG+ATTFLTL D+ VFYDL+++
Sbjct: 617 VAGRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLTLQDSEVFYDLKQM 676

Query: 386 LIQSNCCVPPELSRHKASRFKAGSIPGRPPK 294
           LIQSN  VPPEL+RH+AS+FK GSIP RPP+
Sbjct: 677 LIQSNSPVPPELARHEASKFKPGSIPDRPPR 707


>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  136 bits (342), Expect = 3e-30
 Identities = 80/151 (52%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
 Frame = -2

Query: 557 VAGRGIDIPDVAHVINYDMPKKIGLYIRRIGR---AGKTGIATTFLTLDDTVVFYDLEKI 387
           VAGRGIDIPDVAHVINYDMP  I +Y  RIGR   AGKTG+ATTFLTL D+ VFYDL+++
Sbjct: 532 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQM 591

Query: 386 LIQSNCCVPPELSRHKASRFKAGSIPGRPPKTQ*HNLCSLMRNAVLLAGTLEVQECCCNM 207
           LIQSN  VPPEL+RH+AS+FK GSIP RPP+      C +     LL            +
Sbjct: 592 LIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTYFCGIAAAMPLLPSN---SRTFIMI 648

Query: 206 QIRNLLYN*RSHYLYAYFAVFLFTFAFYAVC 114
            I NLL +    +L+ Y  V L    F   C
Sbjct: 649 LIENLLLS-LIFFLFIYAEVDLKGLIFIFQC 678


>ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683285|gb|EDQ69696.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 535

 Score =  136 bits (342), Expect = 3e-30
 Identities = 68/91 (74%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
 Frame = -2

Query: 557 VAGRGIDIPDVAHVINYDMPKKIGLYIRRIGR---AGKTGIATTFLTLDDTVVFYDLEKI 387
           VAGRGIDIPDVAHVINYDMP  I +Y  RIGR   AGKTGIATTFLTL DT VFYDL+++
Sbjct: 436 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGIATTFLTLHDTDVFYDLKQM 495

Query: 386 LIQSNCCVPPELSRHKASRFKAGSIPGRPPK 294
           L+QSN  VPPEL+RH+AS+FK GSIP RPP+
Sbjct: 496 LVQSNSPVPPELARHEASKFKPGSIPDRPPR 526


>ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 781

 Score =  135 bits (339), Expect = 6e-30
 Identities = 67/91 (73%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
 Frame = -2

Query: 557 VAGRGIDIPDVAHVINYDMPKKIGLYIRRIGR---AGKTGIATTFLTLDDTVVFYDLEKI 387
           VAGRGIDIPDVAHVINYDMP  I +Y  RIGR   AGKTG+ATTFLTL DT VFY+L+++
Sbjct: 608 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYELKQM 667

Query: 386 LIQSNCCVPPELSRHKASRFKAGSIPGRPPK 294
           LIQSN  VPPEL+RH+AS+FK GSIP RPP+
Sbjct: 668 LIQSNSPVPPELARHEASKFKPGSIPDRPPR 698


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