BLASTX nr result

ID: Bupleurum21_contig00010432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010432
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arab...    63   2e-08
ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo...    63   3e-08
ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|1...    63   3e-08
emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thalian...    60   1e-07
gb|AAL91164.1| unknown protein [Arabidopsis thaliana] gi|2319768...    60   1e-07

>ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
           lyrata] gi|297313924|gb|EFH44347.1| hypothetical protein
           ARALYDRAFT_493172 [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = -3

Query: 166 NSKRTRASLSTNFLSPYTAGSVAGDFSGQKIRPASLNPHAPSSSFPGKRGVVTMV 2
           +S   RASLS  FLSPYT GS++ DF G K+R  SLNP   SSS P KRGVVTMV
Sbjct: 37  SSSSLRASLSNGFLSPYTGGSISSDFCGAKLRAESLNPLNLSSSKP-KRGVVTMV 90


>ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
           gi|449510487|ref|XP_004163680.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit-related
           protein 4, chloroplastic-like [Cucumis sativus]
          Length = 304

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
 Frame = -3

Query: 148 ASLSTNFLSPYTAGSVAGDFSGQKIRPASLNP-HAPSSSFPGKRGVVTMV 2
           A LSTNFL P+  GSV+G+FSG K+RP+SLNP ++P S   GKRGVVTMV
Sbjct: 42  APLSTNFLIPFAGGSVSGEFSGVKLRPSSLNPNYSPGSK--GKRGVVTMV 89


>ref|XP_002329556.1| predicted protein [Populus trichocarpa] gi|118483146|gb|ABK93479.1|
           unknown [Populus trichocarpa]
           gi|222870265|gb|EEF07396.1| predicted protein [Populus
           trichocarpa]
          Length = 310

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/54 (64%), Positives = 39/54 (72%)
 Frame = -3

Query: 163 SKRTRASLSTNFLSPYTAGSVAGDFSGQKIRPASLNPHAPSSSFPGKRGVVTMV 2
           S  +RASLST FLSP+  GS+  DFSG KIRP  LNP + SSS  GKR VVTMV
Sbjct: 43  SSSSRASLSTCFLSPFAGGSITCDFSGTKIRPECLNPASISSS-KGKRSVVTMV 95


>emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
           gi|7268455|emb|CAB80975.1| Clp proteinase like protein
           [Arabidopsis thaliana]
          Length = 241

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/55 (61%), Positives = 38/55 (69%)
 Frame = -3

Query: 166 NSKRTRASLSTNFLSPYTAGSVAGDFSGQKIRPASLNPHAPSSSFPGKRGVVTMV 2
           +S   RASLS  FLSPYT GS++ D  G K+R  SLNP   SSS P KRGVVTMV
Sbjct: 37  SSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKP-KRGVVTMV 90


>gb|AAL91164.1| unknown protein [Arabidopsis thaliana] gi|23197684|gb|AAN15369.1|
           unknown protein [Arabidopsis thaliana]
          Length = 305

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/55 (61%), Positives = 38/55 (69%)
 Frame = -3

Query: 166 NSKRTRASLSTNFLSPYTAGSVAGDFSGQKIRPASLNPHAPSSSFPGKRGVVTMV 2
           +S   RASLS  FLSPYT GS++ D  G K+R  SLNP   SSS P KRGVVTMV
Sbjct: 37  SSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESLNPLNFSSSKP-KRGVVTMV 90


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