BLASTX nr result
ID: Bupleurum21_contig00010414
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00010414
(1532 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vini... 753 0.0
ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus com... 739 0.0
sp|O81983.1|SYS_HELAN RecName: Full=Serine--tRNA ligase; AltName... 728 0.0
ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glyci... 721 0.0
ref|XP_002306393.1| predicted protein [Populus trichocarpa] gi|2... 715 0.0
>ref|XP_002284787.1| PREDICTED: seryl-tRNA synthetase [Vitis vinifera]
gi|296088317|emb|CBI36762.3| unnamed protein product
[Vitis vinifera]
Length = 447
Score = 753 bits (1943), Expect = 0.0
Identities = 365/447 (81%), Positives = 408/447 (91%)
Frame = +1
Query: 91 MLDINLFREDKGNNPEIIKESQRRRFKDDAVVDEVIALDKELRLRQYELDNLRKDFNLIN 270
MLDINLFREDKG+NPEII+ESQRRR+ + +VDEVI LDKE R RQ+E +NLRK+FN IN
Sbjct: 1 MLDINLFREDKGHNPEIIRESQRRRYANVELVDEVIHLDKEWRQRQFEYENLRKEFNKIN 60
Query: 271 KQVAKLKIAGKDASEMIKSTEDNKDSTAKKTEEVEAARKALYAKLETIGNLVHDSVPISN 450
KQVAKLKI+G+DASEMIKST++NK T+KK EV+ A AL +KLE IGNLVHDSVP+SN
Sbjct: 61 KQVAKLKISGEDASEMIKSTDENKRLTSKKEAEVQEALAALNSKLEIIGNLVHDSVPVSN 120
Query: 451 NEDDNDIIRSWGEKRSEQNLKSHVDLVELLGIAELKKGANVAGGRGYYLKGDGVRLNQAL 630
+E +N +IRSWGEK+ E LK+HV+LVELLGIA+LKKGAN+AGGRG+YLKGDGVRLNQAL
Sbjct: 121 DEANNAVIRSWGEKKVEPKLKNHVELVELLGIADLKKGANIAGGRGFYLKGDGVRLNQAL 180
Query: 631 ICFALDFLEKRAYTPLQPPFFMRKDIMAKCAQLAQFDEELYKVSGEGDDKYLIATAEQPL 810
I F LDFLEKR YT LQ PFFMRKDIMAKCAQLAQFDEELYKV+GEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 811 CAYHIDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTSPKGVD 990
CAYH+DDWIHPSQLP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+TSP G D
Sbjct: 241 CAYHLDDWIHPSQLPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
Query: 991 SWDMFEEMIKNSEDFYQMLKIPYQIVAIVTGALNDAAAKKYDLEAWFPASQTYRELVSCS 1170
SWDM EEMIKNSEDFY+ML IPYQ+VAIV+GALNDAAAKKYDLE WFPASQTYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEGWFPASQTYRELVSCS 360
Query: 1171 NCTDYQSRKLEIRYGQKKSNDPTKHYVHMLNSTLTATERTICCILENYQEKDGVKVPEVL 1350
NCTDYQSR+LEIRYGQKKSN+ K YVH+LNSTLTATERTICCILENYQ++DGV+VPE L
Sbjct: 361 NCTDYQSRRLEIRYGQKKSNEQIKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEPL 420
Query: 1351 QPYMGGKTFMSFQSAPPNEAKGKKSKA 1431
+P+MGGKTF+ FQ++P EAKGKKSKA
Sbjct: 421 RPFMGGKTFLPFQTSPATEAKGKKSKA 447
>ref|XP_002514398.1| seryl-tRNA synthetase, putative [Ricinus communis]
gi|223546495|gb|EEF47994.1| seryl-tRNA synthetase,
putative [Ricinus communis]
Length = 447
Score = 739 bits (1909), Expect = 0.0
Identities = 360/447 (80%), Positives = 400/447 (89%)
Frame = +1
Query: 91 MLDINLFREDKGNNPEIIKESQRRRFKDDAVVDEVIALDKELRLRQYELDNLRKDFNLIN 270
MLDINLFREDKG+NP++I+ESQRRRF + VV E+I LDKE R RQYELDNLRKDFN IN
Sbjct: 1 MLDINLFREDKGHNPQLIRESQRRRFANVNVVGEIILLDKEWRQRQYELDNLRKDFNKIN 60
Query: 271 KQVAKLKIAGKDASEMIKSTEDNKDSTAKKTEEVEAARKALYAKLETIGNLVHDSVPISN 450
K VAKLKIAG+DA+EMIK T +NK TA+K +V+ A AL KLE +GNLVHDSVP+SN
Sbjct: 61 KLVAKLKIAGEDATEMIKDTNENKRLTAEKEAQVQEAALALNKKLEEVGNLVHDSVPVSN 120
Query: 451 NEDDNDIIRSWGEKRSEQNLKSHVDLVELLGIAELKKGANVAGGRGYYLKGDGVRLNQAL 630
+E +N +IR WGEKR E LK+HVDLVELLGIA+ KKGANVAGGRG+YLKGDGVRLNQAL
Sbjct: 121 DEANNAVIRVWGEKRLEPKLKNHVDLVELLGIADTKKGANVAGGRGFYLKGDGVRLNQAL 180
Query: 631 ICFALDFLEKRAYTPLQPPFFMRKDIMAKCAQLAQFDEELYKVSGEGDDKYLIATAEQPL 810
I ALDFLEKR YT LQ PFFMRKDIMAKCAQLAQFDEELYKV+GEG+DKYLIATAEQPL
Sbjct: 181 INVALDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGEDKYLIATAEQPL 240
Query: 811 CAYHIDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTSPKGVD 990
CAYH+DDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+TSP G D
Sbjct: 241 CAYHLDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
Query: 991 SWDMFEEMIKNSEDFYQMLKIPYQIVAIVTGALNDAAAKKYDLEAWFPASQTYRELVSCS 1170
SWDM EEMIKNSEDFY+ML IPYQ+VAIV+GALNDAAAKKYDLEAWFPAS TYRELVSCS
Sbjct: 301 SWDMHEEMIKNSEDFYKMLNIPYQVVAIVSGALNDAAAKKYDLEAWFPASNTYRELVSCS 360
Query: 1171 NCTDYQSRKLEIRYGQKKSNDPTKHYVHMLNSTLTATERTICCILENYQEKDGVKVPEVL 1350
NCTDYQSRKLEIRYGQKK+N+ K YVH+LNSTLTATERT+CCILENYQ+++GV++PE L
Sbjct: 361 NCTDYQSRKLEIRYGQKKNNEQAKQYVHLLNSTLTATERTLCCILENYQKENGVEIPEPL 420
Query: 1351 QPYMGGKTFMSFQSAPPNEAKGKKSKA 1431
+ YMGGK+F+ FQ+ PP E KGKKSKA
Sbjct: 421 RGYMGGKSFLPFQNNPPTEGKGKKSKA 447
>sp|O81983.1|SYS_HELAN RecName: Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
synthetase; Short=SerRS; AltName:
Full=Seryl-tRNA(Ser/Sec) synthetase
gi|3451411|emb|CAB11470.1| seryl-tRNA synthetase
[Helianthus annuus]
Length = 438
Score = 728 bits (1878), Expect = 0.0
Identities = 347/432 (80%), Positives = 391/432 (90%)
Frame = +1
Query: 91 MLDINLFREDKGNNPEIIKESQRRRFKDDAVVDEVIALDKELRLRQYELDNLRKDFNLIN 270
MLDINLFRE+KG NPEI++ESQRRR +VDE+I LDKE R RQ+EL+ LRKDFN IN
Sbjct: 1 MLDINLFREEKGGNPEIVRESQRRRGASVEIVDEIIKLDKEWRQRQFELEQLRKDFNRIN 60
Query: 271 KQVAKLKIAGKDASEMIKSTEDNKDSTAKKTEEVEAARKALYAKLETIGNLVHDSVPISN 450
K+VAKL+I+G DAS +IK+TE+NKDSTAKK EV+ AR ALY+KLET+GNLVHDSVP+SN
Sbjct: 61 KEVAKLRISGGDASSLIKNTEENKDSTAKKQAEVQEARTALYSKLETVGNLVHDSVPVSN 120
Query: 451 NEDDNDIIRSWGEKRSEQNLKSHVDLVELLGIAELKKGANVAGGRGYYLKGDGVRLNQAL 630
+E DN ++R+WGE+R E NLK+HV+LVELLGIA+LKKGANVAGGRGYYLKGDGVRLNQAL
Sbjct: 121 DEADNAVVRTWGERREETNLKNHVELVELLGIADLKKGANVAGGRGYYLKGDGVRLNQAL 180
Query: 631 ICFALDFLEKRAYTPLQPPFFMRKDIMAKCAQLAQFDEELYKVSGEGDDKYLIATAEQPL 810
I F LDFLEKR YT LQ PFFMRKDIM KCAQLAQFDEELYKV+GEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 811 CAYHIDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTSPKGVD 990
CAYHIDDWIHP++LP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+T P G D
Sbjct: 241 CAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTKPSGND 300
Query: 991 SWDMFEEMIKNSEDFYQMLKIPYQIVAIVTGALNDAAAKKYDLEAWFPASQTYRELVSCS 1170
SW+M EEMIKNSE+FYQMLK+PYQ+V+IV+GALNDAAAKKYDLEAWFPAS+TYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS 360
Query: 1171 NCTDYQSRKLEIRYGQKKSNDPTKHYVHMLNSTLTATERTICCILENYQEKDGVKVPEVL 1350
NCTDYQSRKLEIR GQKK N+ K Y H+LNSTLTATERT+CCILENYQ + GV +PEVL
Sbjct: 361 NCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCILENYQTEKGVAIPEVL 420
Query: 1351 QPYMGGKTFMSF 1386
QP+MGGKTF+ F
Sbjct: 421 QPFMGGKTFLDF 432
>ref|XP_003536082.1| PREDICTED: seryl-tRNA synthetase-like [Glycine max]
Length = 447
Score = 721 bits (1860), Expect = 0.0
Identities = 349/447 (78%), Positives = 397/447 (88%)
Frame = +1
Query: 91 MLDINLFREDKGNNPEIIKESQRRRFKDDAVVDEVIALDKELRLRQYELDNLRKDFNLIN 270
MLDINLFRE+KG+NPE+I+ESQRRRF +VDEVI LDKE R RQ+EL+NLRK+FN IN
Sbjct: 1 MLDINLFREEKGHNPELIRESQRRRFASVEIVDEVINLDKEWRKRQFELENLRKEFNKIN 60
Query: 271 KQVAKLKIAGKDASEMIKSTEDNKDSTAKKTEEVEAARKALYAKLETIGNLVHDSVPISN 450
K+V+KLK AG+DAS+ I +E+ K S A+K EV L +KLETIGNLVHDSVPISN
Sbjct: 61 KEVSKLKRAGEDASKFITESEETKKSIAEKEVEVRETLNLLNSKLETIGNLVHDSVPISN 120
Query: 451 NEDDNDIIRSWGEKRSEQNLKSHVDLVELLGIAELKKGANVAGGRGYYLKGDGVRLNQAL 630
+E +N ++RSWGEKR E LK+HVDLVELLGIA+ KKGA+VAGGRG+YLKGDGVRLNQAL
Sbjct: 121 DEANNVVVRSWGEKRVEPKLKNHVDLVELLGIADTKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 631 ICFALDFLEKRAYTPLQPPFFMRKDIMAKCAQLAQFDEELYKVSGEGDDKYLIATAEQPL 810
I F LDFL+KR YT L PFFMRKDIM+KCAQLAQFDEELYKV+GEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLDKREYTLLHTPFFMRKDIMSKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 811 CAYHIDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTSPKGVD 990
CAYH+DDWIHP+QLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+TSP D
Sbjct: 241 CAYHLDDWIHPTQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTSPNDND 300
Query: 991 SWDMFEEMIKNSEDFYQMLKIPYQIVAIVTGALNDAAAKKYDLEAWFPASQTYRELVSCS 1170
SWDM EEM+KNSEDFY+ L +PYQ+V+IV+GALNDAAAKKYDLEAWFPASQ YRELVSCS
Sbjct: 301 SWDMHEEMLKNSEDFYKALNLPYQVVSIVSGALNDAAAKKYDLEAWFPASQAYRELVSCS 360
Query: 1171 NCTDYQSRKLEIRYGQKKSNDPTKHYVHMLNSTLTATERTICCILENYQEKDGVKVPEVL 1350
NCTDYQ+R+LEIRYGQKKSN+ K YVH+LNSTLTATERTICCILEN Q++DGV++PEVL
Sbjct: 361 NCTDYQARRLEIRYGQKKSNEQMKQYVHLLNSTLTATERTICCILENNQKEDGVEIPEVL 420
Query: 1351 QPYMGGKTFMSFQSAPPNEAKGKKSKA 1431
+P+MGGKTF+ F+S P NEAKGKKSKA
Sbjct: 421 RPFMGGKTFLPFKSQPSNEAKGKKSKA 447
>ref|XP_002306393.1| predicted protein [Populus trichocarpa] gi|222855842|gb|EEE93389.1|
predicted protein [Populus trichocarpa]
Length = 447
Score = 715 bits (1845), Expect = 0.0
Identities = 343/447 (76%), Positives = 394/447 (88%)
Frame = +1
Query: 91 MLDINLFREDKGNNPEIIKESQRRRFKDDAVVDEVIALDKELRLRQYELDNLRKDFNLIN 270
MLDINLFRE+KGNNPE I+ESQRRR+ + +VDE+I D E R RQ+ELD+LR++FN N
Sbjct: 1 MLDINLFREEKGNNPEKIRESQRRRYANTEIVDEIIQFDNEWRQRQFELDSLRREFNKQN 60
Query: 271 KQVAKLKIAGKDASEMIKSTEDNKDSTAKKTEEVEAARKALYAKLETIGNLVHDSVPISN 450
K+VA+LKIA +DA+E I+ TE+ K A K +EV+ A+ ALY++L TIGNLVHDSVP+++
Sbjct: 61 KKVAQLKIAKEDATEAIRETEETKKLIADKEKEVQEAKDALYSRLPTIGNLVHDSVPVND 120
Query: 451 NEDDNDIIRSWGEKRSEQNLKSHVDLVELLGIAELKKGANVAGGRGYYLKGDGVRLNQAL 630
NED N +IR+WGEKR E+ L++HVDLVELLGIA+LKKGA+VAGGRG+YLKGDGVRLNQAL
Sbjct: 121 NEDFNAVIRAWGEKRVEKKLRNHVDLVELLGIADLKKGADVAGGRGFYLKGDGVRLNQAL 180
Query: 631 ICFALDFLEKRAYTPLQPPFFMRKDIMAKCAQLAQFDEELYKVSGEGDDKYLIATAEQPL 810
I F L+FLEKR YT LQ PFFMRKD+MAKCAQLAQFDEELYKV+GEGDDKYLIATAEQPL
Sbjct: 181 INFGLEFLEKRGYTALQTPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 811 CAYHIDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCVTSPKGVD 990
CAYH+DDWIHPSQLPIRYAGYSSCFRKEAG+HGRDTLGIFRVHQFEKVEQFC+TSP G D
Sbjct: 241 CAYHLDDWIHPSQLPIRYAGYSSCFRKEAGAHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
Query: 991 SWDMFEEMIKNSEDFYQMLKIPYQIVAIVTGALNDAAAKKYDLEAWFPASQTYRELVSCS 1170
SW+M EEMIKNSE+FYQ L IPYQ+VAIV+GALNDAAAKKYDLE WFPAS TYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEEFYQELNIPYQVVAIVSGALNDAAAKKYDLEGWFPASNTYRELVSCS 360
Query: 1171 NCTDYQSRKLEIRYGQKKSNDPTKHYVHMLNSTLTATERTICCILENYQEKDGVKVPEVL 1350
NCTDYQSR+LEIRYGQKKSN+ K Y H+LNSTLTATERTICCILENYQ++DGV+VPE L
Sbjct: 361 NCTDYQSRRLEIRYGQKKSNEQVKQYCHLLNSTLTATERTICCILENYQKEDGVEVPEPL 420
Query: 1351 QPYMGGKTFMSFQSAPPNEAKGKKSKA 1431
+ YM GK F+ FQ+ P E KGKK KA
Sbjct: 421 RKYMSGKEFLPFQNKPSTEGKGKKPKA 447