BLASTX nr result

ID: Bupleurum21_contig00010407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010407
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi...   203   1e-50
ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|2...   201   4e-50
ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-lik...   201   5e-50
ref|XP_002528095.1| conserved hypothetical protein [Ricinus comm...   199   2e-49
ref|XP_003529151.1| PREDICTED: LIMR family protein At5g01460-lik...   199   3e-49

>ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera]
           gi|297740207|emb|CBI30389.3| unnamed protein product
           [Vitis vinifera]
          Length = 509

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/125 (78%), Positives = 112/125 (89%)
 Frame = -1

Query: 377 IKSALIWVAASAIVCALLLGILYGIVGKVDFTVRHLSSDTTPFPSNWGQFTDGHQCIGSG 198
           IKSAL+WV  +AIVCAL+LGILYG+VGKVDFTVRHLSS TT FP++W + +   QCIGSG
Sbjct: 123 IKSALLWVITTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPTSW-ELSSSQQCIGSG 181

Query: 197 SHECSTFTANASSEKTWTKRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLITSFVR 18
           +H+CS ++A+ASSEKTWT R TFPEYVVALATIVGSVLFSIFGGVGIACLPLGLI SF+R
Sbjct: 182 THQCSAYSASASSEKTWTMRTTFPEYVVALATIVGSVLFSIFGGVGIACLPLGLIFSFIR 241

Query: 17  RPKAV 3
           RPKAV
Sbjct: 242 RPKAV 246


>ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|222854193|gb|EEE91740.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  201 bits (512), Expect = 4e-50
 Identities = 98/125 (78%), Positives = 108/125 (86%)
 Frame = -1

Query: 377 IKSALIWVAASAIVCALLLGILYGIVGKVDFTVRHLSSDTTPFPSNWGQFTDGHQCIGSG 198
           IKSAL+WV  +AIVC L+LGILYG++GKVDFTVRHLSS TT FPS W  F+    CIGSG
Sbjct: 123 IKSALLWVITTAIVCGLVLGILYGVIGKVDFTVRHLSSTTTTFPSTW-DFSGSQPCIGSG 181

Query: 197 SHECSTFTANASSEKTWTKRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLITSFVR 18
            H+CS + ANASSEKTWT RATFPEYVVALATIVGSVLF+IFGGVGIACLPLGLI SF+R
Sbjct: 182 PHQCSAYLANASSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIR 241

Query: 17  RPKAV 3
           RPKAV
Sbjct: 242 RPKAV 246


>ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score =  201 bits (511), Expect = 5e-50
 Identities = 97/125 (77%), Positives = 110/125 (88%)
 Frame = -1

Query: 377 IKSALIWVAASAIVCALLLGILYGIVGKVDFTVRHLSSDTTPFPSNWGQFTDGHQCIGSG 198
           IKSAL+W+  +AIVCAL+LGILYG+VGKVDFTVRHLSS TT FPS W  F+ G  CIG+G
Sbjct: 123 IKSALLWMVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTTSFPSTW-TFSSGQPCIGNG 181

Query: 197 SHECSTFTANASSEKTWTKRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLITSFVR 18
           +H+CS F+A+ SSEKTWT R TFPEYVVALATIVGSVLF+IFGGVGIACLPLGLI SF+R
Sbjct: 182 AHQCSAFSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIR 241

Query: 17  RPKAV 3
           RPKAV
Sbjct: 242 RPKAV 246


>ref|XP_002528095.1| conserved hypothetical protein [Ricinus communis]
           gi|223532484|gb|EEF34274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 509

 Score =  199 bits (507), Expect = 2e-49
 Identities = 97/125 (77%), Positives = 109/125 (87%)
 Frame = -1

Query: 377 IKSALIWVAASAIVCALLLGILYGIVGKVDFTVRHLSSDTTPFPSNWGQFTDGHQCIGSG 198
           IKSAL+WV  +AIVC L+LGILYG+VGKVDFTVRHLSS TT FPS W +F+ G  CIGSG
Sbjct: 123 IKSALVWVITTAIVCGLVLGILYGLVGKVDFTVRHLSSTTTNFPSTW-EFSSGQPCIGSG 181

Query: 197 SHECSTFTANASSEKTWTKRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLITSFVR 18
           + +CS + ANASSEKTW+ R TFPEYVVALATIVGSVLF+IFGGVGIACLPLGLI SF+R
Sbjct: 182 ARQCSAYLANASSEKTWSMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIR 241

Query: 17  RPKAV 3
           RPKAV
Sbjct: 242 RPKAV 246


>ref|XP_003529151.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score =  199 bits (505), Expect = 3e-49
 Identities = 96/125 (76%), Positives = 109/125 (87%)
 Frame = -1

Query: 377 IKSALIWVAASAIVCALLLGILYGIVGKVDFTVRHLSSDTTPFPSNWGQFTDGHQCIGSG 198
           IKSAL+W+  +AIVCAL+LGILYG+VGKVDFT+RHLSS TT FPS W  F+ G  CIGS 
Sbjct: 123 IKSALMWMVTTAIVCALVLGILYGLVGKVDFTIRHLSSSTTSFPSTW-TFSSGQPCIGSD 181

Query: 197 SHECSTFTANASSEKTWTKRATFPEYVVALATIVGSVLFSIFGGVGIACLPLGLITSFVR 18
           +H+CS F+A+ SSEKTWT R TFPEYVVALATIVGSVLF+IFGGVGIACLPLGLI SF+R
Sbjct: 182 AHQCSAFSASPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIR 241

Query: 17  RPKAV 3
           RPKAV
Sbjct: 242 RPKAV 246


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