BLASTX nr result

ID: Bupleurum21_contig00010406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010406
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...    69   4e-10
gb|AFK41754.1| unknown [Lotus japonicus]                               69   4e-10
gb|AFK37213.1| unknown [Medicago truncatula]                           69   4e-10
ref|XP_002299989.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea b...    69   5e-10

>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 303 EFTAEGRRVTKLDQILLNGNNIAILVPGGSPDPE 202
           E TAEGRR+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 54  EITAEGRRITKLDQILLNGNNIAILVPGGSPDPE 87


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 303 EFTAEGRRVTKLDQILLNGNNIAILVPGGSPDPE 202
           E TAEGRR+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 54  EITAEGRRITKLDQILLNGNNIAILVPGGSPDPE 87


>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 303 EFTAEGRRVTKLDQILLNGNNIAILVPGGSPDPE 202
           E TAEGRR+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 54  EITAEGRRITKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_002299989.1| predicted protein [Populus trichocarpa]
           gi|224103927|ref|XP_002313247.1| predicted protein
           [Populus trichocarpa] gi|118484238|gb|ABK93999.1|
           unknown [Populus trichocarpa]
           gi|222847247|gb|EEE84794.1| predicted protein [Populus
           trichocarpa] gi|222849655|gb|EEE87202.1| predicted
           protein [Populus trichocarpa]
          Length = 88

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 303 EFTAEGRRVTKLDQILLNGNNIAILVPGGSPDPE 202
           E TAEGRR+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 55  EITAEGRRITKLDQILLNGNNIAILVPGGSPDPE 88


>gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
          Length = 87

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 303 EFTAEGRRVTKLDQILLNGNNIAILVPGGSPDPE 202
           E TAEGRR+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 54  EVTAEGRRITKLDQILLNGNNIAILVPGGSPDPE 87


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