BLASTX nr result

ID: Bupleurum21_contig00010399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010399
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]   282   2e-74
ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [...   279   2e-73
ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-l...   274   6e-72
ref|XP_003556905.1| PREDICTED: uncharacterized protein all1601-l...   267   6e-70
ref|XP_002892229.1| coenzyme F420 hydrogenase family [Arabidopsi...   263   1e-68

>emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]
          Length = 240

 Score =  282 bits (721), Expect = 2e-74
 Identities = 133/154 (86%), Positives = 145/154 (94%)
 Frame = -1

Query: 464 SSPVVFASKDANSNPKSVKLREDWRKKSKPIPPGGTYPAKDHCSQCGLCDTYYIAHVKNA 285
           SS    +SKDANSNPKSVKLR+DWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVKNA
Sbjct: 15  SSSSSSSSKDANSNPKSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNA 74

Query: 284 CAFLGDGMSRIERLEPLVHGRGRKDDSLDETHLGVYEELLYARKINPVEGAQWTGIVTTI 105
           CAFLGDGMS+IE LEPLVHGRGRKD SLDET+LGVYE+LLYARK  PVEGAQWTGIVTTI
Sbjct: 75  CAFLGDGMSKIESLEPLVHGRGRKDYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTI 134

Query: 104 AIEMLKSGMVEAVICVQSDPDDRFAPRPVLARTP 3
           AIEMLK+GMVEAVICVQSDP+DR +PRPVLARTP
Sbjct: 135 AIEMLKAGMVEAVICVQSDPEDRLSPRPVLARTP 168


>ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
           gi|297741879|emb|CBI33314.3| unnamed protein product
           [Vitis vinifera]
          Length = 457

 Score =  279 bits (713), Expect = 2e-73
 Identities = 132/154 (85%), Positives = 144/154 (93%)
 Frame = -1

Query: 464 SSPVVFASKDANSNPKSVKLREDWRKKSKPIPPGGTYPAKDHCSQCGLCDTYYIAHVKNA 285
           SS    +SKDANSNPKSVKLR+DWR++S+PIPPGGTYPAKDHCS+CGLCDTYYIAHVKNA
Sbjct: 15  SSSSSSSSKDANSNPKSVKLRDDWRQRSRPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNA 74

Query: 284 CAFLGDGMSRIERLEPLVHGRGRKDDSLDETHLGVYEELLYARKINPVEGAQWTGIVTTI 105
           CAFLGDGMS+IE LEPLVHGRGRK  SLDET+LGVYE+LLYARK  PVEGAQWTGIVTTI
Sbjct: 75  CAFLGDGMSKIESLEPLVHGRGRKAYSLDETYLGVYEQLLYARKTEPVEGAQWTGIVTTI 134

Query: 104 AIEMLKSGMVEAVICVQSDPDDRFAPRPVLARTP 3
           AIEMLK+GMVEAVICVQSDP+DR +PRPVLARTP
Sbjct: 135 AIEMLKAGMVEAVICVQSDPEDRLSPRPVLARTP 168


>ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
          Length = 452

 Score =  274 bits (700), Expect = 6e-72
 Identities = 127/143 (88%), Positives = 137/143 (95%)
 Frame = -1

Query: 431 NSNPKSVKLREDWRKKSKPIPPGGTYPAKDHCSQCGLCDTYYIAHVKNACAFLGDGMSRI 252
           +S+ K   L++DWR KSKPIPPGGTYPAKDHCS+CGLCDTYYIAHVKNACAFLGDGMS+I
Sbjct: 21  SSSSKDTSLKQDWRTKSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKI 80

Query: 251 ERLEPLVHGRGRKDDSLDETHLGVYEELLYARKINPVEGAQWTGIVTTIAIEMLKSGMVE 72
           ERLEP+VHGRGRK D+LDET+LGVYEELLYARK+NPVEGAQWTGIVTTIAIEMLKSGMVE
Sbjct: 81  ERLEPVVHGRGRKTDNLDETYLGVYEELLYARKLNPVEGAQWTGIVTTIAIEMLKSGMVE 140

Query: 71  AVICVQSDPDDRFAPRPVLARTP 3
           AVICVQSDPDDRFAPRPVLARTP
Sbjct: 141 AVICVQSDPDDRFAPRPVLARTP 163


>ref|XP_003556905.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
          Length = 452

 Score =  267 bits (683), Expect = 6e-70
 Identities = 123/143 (86%), Positives = 134/143 (93%)
 Frame = -1

Query: 431 NSNPKSVKLREDWRKKSKPIPPGGTYPAKDHCSQCGLCDTYYIAHVKNACAFLGDGMSRI 252
           +S+ K   L++DWR KSKPIPPGGTYPAKDHCS+CGLCDTYYIAHVKNACAFLGDGMS I
Sbjct: 21  SSSSKDTSLKQDWRTKSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSNI 80

Query: 251 ERLEPLVHGRGRKDDSLDETHLGVYEELLYARKINPVEGAQWTGIVTTIAIEMLKSGMVE 72
           ERLEP+VHGRGRK D++DET+LGVYEELLYARK+ P EGAQWTGIVTTIAIEMLKSGMVE
Sbjct: 81  ERLEPVVHGRGRKTDNMDETYLGVYEELLYARKLQPAEGAQWTGIVTTIAIEMLKSGMVE 140

Query: 71  AVICVQSDPDDRFAPRPVLARTP 3
           AVICVQSDPDD+FAPRPVLARTP
Sbjct: 141 AVICVQSDPDDKFAPRPVLARTP 163


>ref|XP_002892229.1| coenzyme F420 hydrogenase family [Arabidopsis lyrata subsp. lyrata]
           gi|297338071|gb|EFH68488.1| coenzyme F420 hydrogenase
           family [Arabidopsis lyrata subsp. lyrata]
          Length = 461

 Score =  263 bits (671), Expect = 1e-68
 Identities = 123/148 (83%), Positives = 136/148 (91%), Gaps = 1/148 (0%)
 Frame = -1

Query: 443 SKDANSNPKS-VKLREDWRKKSKPIPPGGTYPAKDHCSQCGLCDTYYIAHVKNACAFLGD 267
           SKD N+ PK  VKLREDWR+KSKPIPPGGTYPAKDHCS+CGLCDTYYIAHVK ACAFLGD
Sbjct: 25  SKDMNTEPKKKVKLREDWREKSKPIPPGGTYPAKDHCSRCGLCDTYYIAHVKEACAFLGD 84

Query: 266 GMSRIERLEPLVHGRGRKDDSLDETHLGVYEELLYARKINPVEGAQWTGIVTTIAIEMLK 87
           GMSRIE LEP+VHGRGRK DSL++T+ GV++E LYARK+ PVEGAQWTGIVTTIAIEMLK
Sbjct: 85  GMSRIESLEPVVHGRGRKPDSLEDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLK 144

Query: 86  SGMVEAVICVQSDPDDRFAPRPVLARTP 3
           S MVEAV+CVQSDP+DR +PRPVLARTP
Sbjct: 145 SNMVEAVVCVQSDPEDRLSPRPVLARTP 172


Top