BLASTX nr result
ID: Bupleurum21_contig00010387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00010387 (848 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24978.3| unnamed protein product [Vitis vinifera] 222 9e-56 ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro... 217 2e-54 emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera] 215 9e-54 ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2... 207 2e-51 ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing pro... 206 4e-51 >emb|CBI24978.3| unnamed protein product [Vitis vinifera] Length = 435 Score = 222 bits (565), Expect = 9e-56 Identities = 110/203 (54%), Positives = 141/203 (69%) Frame = +2 Query: 2 KWSKIVKIQDGPVTCIALNDAQMXXXXXXXXXXXVSDLSSAQRVATLKSYGSAGISALCV 181 K S+I+++ GPV C+AL+D Q +S LSS QR+A L+S S GI LC Sbjct: 228 KCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKLRSTDSTGIRTLCF 287 Query: 182 NPSSPLIYAGSTAGHAYCWDLRTMRNLWQTRVSPNVIYSMHHLRNHTSTLVVGGIDGVLR 361 NP S L+++GSTAG+A CWDLRTMR LW+ R+SPNVIYSM HL + T TLV GGIDGVLR Sbjct: 288 NPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVIYSMQHLCSDTHTLVAGGIDGVLR 347 Query: 362 IVDENNGKILSSCILNQNSSDQSIRAETSSKVYAVRKKGRRIAENTRIELMPKALRPSIN 541 I+D+N GK++S C+++ + + S + S RKKGRRI E+T I+ +PK+ RP I Sbjct: 348 ILDQNTGKVVSGCVMDDSPAPTSSQKTDS---IIERKKGRRITEDTLIDSIPKSSRPPIT 404 Query: 542 CLAVGFQKVVTTHEDNYIRVWKF 610 CLAVG QKVVTTH YIR+WKF Sbjct: 405 CLAVGMQKVVTTHNGKYIRMWKF 427 >ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Vitis vinifera] Length = 421 Score = 217 bits (553), Expect = 2e-54 Identities = 110/204 (53%), Positives = 141/204 (69%), Gaps = 1/204 (0%) Frame = +2 Query: 2 KWSKIVKIQDGPVTCIALNDAQMXXXXXXXXXXXVSDLSSAQRVATLKSYGSAG-ISALC 178 K S+I+++ GPV C+AL+D Q +S LSS QR+A L+S S G I LC Sbjct: 213 KCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKLRSTDSTGGIRTLC 272 Query: 179 VNPSSPLIYAGSTAGHAYCWDLRTMRNLWQTRVSPNVIYSMHHLRNHTSTLVVGGIDGVL 358 NP S L+++GSTAG+A CWDLRTMR LW+ R+SPNVIYSM HL + T TLV GGIDGVL Sbjct: 273 FNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVIYSMQHLCSDTHTLVAGGIDGVL 332 Query: 359 RIVDENNGKILSSCILNQNSSDQSIRAETSSKVYAVRKKGRRIAENTRIELMPKALRPSI 538 RI+D+N GK++S C+++ + + S + S RKKGRRI E+T I+ +PK+ RP I Sbjct: 333 RILDQNTGKVVSGCVMDDSPAPTSSQKTDS---IIERKKGRRITEDTLIDSIPKSSRPPI 389 Query: 539 NCLAVGFQKVVTTHEDNYIRVWKF 610 CLAVG QKVVTTH YIR+WKF Sbjct: 390 TCLAVGMQKVVTTHNGKYIRMWKF 413 >emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera] Length = 471 Score = 215 bits (548), Expect = 9e-54 Identities = 109/204 (53%), Positives = 140/204 (68%), Gaps = 1/204 (0%) Frame = +2 Query: 2 KWSKIVKIQDGPVTCIALNDAQMXXXXXXXXXXXVSDLSSAQRVATLKSYGSAG-ISALC 178 K S+I+++ GPV C+AL+D Q +S LSS QR+A L+S S G I LC Sbjct: 263 KCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKLRSTDSTGGIRTLC 322 Query: 179 VNPSSPLIYAGSTAGHAYCWDLRTMRNLWQTRVSPNVIYSMHHLRNHTSTLVVGGIDGVL 358 NP S L+++GSTAG+A CWDLRTMR LW+ R+SPN IYSM HL + T TLV GGIDGVL Sbjct: 323 FNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNXIYSMQHLCSDTHTLVAGGIDGVL 382 Query: 359 RIVDENNGKILSSCILNQNSSDQSIRAETSSKVYAVRKKGRRIAENTRIELMPKALRPSI 538 RI+D+N GK++S C+++ + + S + S RKKGRRI E+T I+ +PK+ RP I Sbjct: 383 RILDQNTGKVVSGCVMDDSPAPTSSQKTDS---IIERKKGRRITEDTLIDSIPKSSRPPI 439 Query: 539 NCLAVGFQKVVTTHEDNYIRVWKF 610 CLAVG QKVVTTH YIR+WKF Sbjct: 440 TCLAVGMQKVVTTHNGKYIRMWKF 463 >ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1| predicted protein [Populus trichocarpa] Length = 444 Score = 207 bits (527), Expect = 2e-51 Identities = 104/203 (51%), Positives = 142/203 (69%) Frame = +2 Query: 2 KWSKIVKIQDGPVTCIALNDAQMXXXXXXXXXXXVSDLSSAQRVATLKSYGSAGISALCV 181 K S+IV++ PVTC++L++ Q+ +S LSS QRVATL+ S GI +LC Sbjct: 239 KCSRIVRMHTEPVTCLSLSEDQLIISGSSLGRITISGLSSDQRVATLRPTDSTGIKSLCF 298 Query: 182 NPSSPLIYAGSTAGHAYCWDLRTMRNLWQTRVSPNVIYSMHHLRNHTSTLVVGGIDGVLR 361 NP S ++AG+TAG+A CWDLRTMR LW+TRVSPNV+YS+ H+R+ TSTLVVGGIDGVLR Sbjct: 299 NPVSHQVFAGTTAGYASCWDLRTMRQLWKTRVSPNVVYSLQHMRSDTSTLVVGGIDGVLR 358 Query: 362 IVDENNGKILSSCILNQNSSDQSIRAETSSKVYAVRKKGRRIAENTRIELMPKALRPSIN 541 ++D+N G++LSS +++ +S S T + RK G+R+ + I+ +PK +RP I Sbjct: 359 VLDQNTGEVLSSYVMDHGTSTSS--GYTHGVI--ERKIGKRLPYDYNIDRIPKTVRPPIT 414 Query: 542 CLAVGFQKVVTTHEDNYIRVWKF 610 CLAVG QKV+TTH IR+WKF Sbjct: 415 CLAVGMQKVITTHNIKNIRMWKF 437 >ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Glycine max] Length = 444 Score = 206 bits (525), Expect = 4e-51 Identities = 101/206 (49%), Positives = 140/206 (67%), Gaps = 2/206 (0%) Frame = +2 Query: 2 KWSKIVKIQDGPVTCIALNDAQMXXXXXXXXXXXVSDLSSAQRVATLKSYGSAGISALCV 181 K S+I+++ P+TC+ L++ Q+ +SD SS Q+VATL+S + GI LC Sbjct: 238 KCSQIIRMHYAPITCLCLSEDQLIMSGSTSGSITMSDPSSVQQVATLRSSDARGIRTLCF 297 Query: 182 NPSSPLIYAGSTAGHAYCWDLRTMRNLWQTRVSPNVIYSMHHLRNHTSTLVVGGIDGVLR 361 NPSS L++AGS G+AYCWDLRT + LW RVSPNVIYS+ H+ + TSTL VGGIDG+LR Sbjct: 298 NPSSQLLFAGSAVGYAYCWDLRTRKLLWSNRVSPNVIYSLQHMHSDTSTLAVGGIDGILR 357 Query: 362 IVDENNGKILSSCILNQNSSDQSIRAETSSKVYAVRKKGRRIAEN--TRIELMPKALRPS 535 ++++N+G ++SSC++ D+ + S R+KG R+ EN I+L+PK RPS Sbjct: 358 LLNQNDGSVVSSCVM----GDKLLSTFQSPSGSIQRRKGSRLPENIYINIDLIPKTARPS 413 Query: 536 INCLAVGFQKVVTTHEDNYIRVWKFK 613 I CLAVG +K+VTTH N IR+WKFK Sbjct: 414 ITCLAVGMKKIVTTHNTNDIRLWKFK 439