BLASTX nr result

ID: Bupleurum21_contig00010305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010305
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312627.1| predicted protein [Populus trichocarpa] gi|2...   273   3e-71
ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   272   4e-71
ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|2...   271   1e-70
ref|XP_002283637.1| PREDICTED: mitochondrial import inner membra...   269   4e-70
ref|XP_004157888.1| PREDICTED: mitochondrial import inner membra...   265   5e-69

>ref|XP_002312627.1| predicted protein [Populus trichocarpa] gi|222852447|gb|EEE89994.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score =  273 bits (697), Expect = 3e-71
 Identities = 139/228 (60%), Positives = 164/228 (71%), Gaps = 1/228 (0%)
 Frame = +2

Query: 32  MATPETSREPCPDRILDDIGGAFAMGAVGGSAFHFLKGIYNSPRGERFLGGSQAVRMNAP 211
           M TPETSREPCPDRILDDIGGAF MGAVGGSAFHFLKG++NSP G R +GG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGVHNSPSGARLMGGTQAVRMNAP 60

Query: 212 RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSIISGAAAGGLLQMRQGLRAASTSALAGG 391
           R+GGSFAVWGGLFS FDCS+VYLRQKEDPWNSII+GAA GG L MRQGL A++ SA+ GG
Sbjct: 61  RVGGSFAVWGGLFSAFDCSMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGASARSAVFGG 120

Query: 392 VLLALIEGSQIMLHKMINESQQNMIMQQHDMXXXXXXXXXXXXXXXXXXXXXXYKASQSE 571
           VLL LIEG+ IML+K++ + Q   IM   D                       +   Q++
Sbjct: 121 VLLGLIEGAGIMLNKVMGDQQSMPIMIDED-----------PIPAMAGGGPGGFPMGQAQ 169

Query: 572 PSDSSSWFKKFKNWF-GDDNKEESKGSGAKTEILESFDAPIPPTFEFK 712
             +S SW   F  WF G+  K+ES  + +KTE+LESFDAP  PTFE+K
Sbjct: 170 EGESGSW---FGGWFGGEKKKKESTAASSKTEVLESFDAPPVPTFEYK 214


>ref|XP_004141020.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane
           translocase subunit Tim17-like [Cucumis sativus]
          Length = 211

 Score =  272 bits (696), Expect = 4e-71
 Identities = 143/229 (62%), Positives = 168/229 (73%), Gaps = 2/229 (0%)
 Frame = +2

Query: 32  MATPETSREPCPDRILDDIGGAFAMGAVGGSAFHFLKGIYNSPRGERFLGGSQAVRMNAP 211
           M TPETSREPCPDRILDDIGGAF MGAVGGSAFHF+KG+YNSPRG R +GG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAP 60

Query: 212 RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSIISGAAAGGLLQMRQGLRAASTSALAGG 391
           R+GGSFAVWGGLFS FDC++VY+RQKEDPWNSII+GAA GG LQMRQG  +A+ SAL GG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSALFGG 120

Query: 392 VLLALIEGSQIMLHKMINESQQNMIMQQHDMXXXXXXXXXXXXXXXXXXXXXXYKASQSE 571
           VLLALIEG+ IML+K++++ QQNM +   +                       Y +S S 
Sbjct: 121 VLLALIEGAGIMLNKVLSQ-QQNMPVVIEE--------------PAGMGGVPGYSSSSSS 165

Query: 572 PSDSSSWFKKFKNWFGDDNKEESKGS--GAKTEILESFDAPIPPTFEFK 712
            S + SWF     WFG   K+ES+ S  G++T ILESFDAP  P FEFK
Sbjct: 166 DSGNGSWFG---GWFGGGKKKESEVSSGGSETTILESFDAPPVPNFEFK 211


>ref|XP_002329674.1| predicted protein [Populus trichocarpa] gi|222870555|gb|EEF07686.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  271 bits (692), Expect = 1e-70
 Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 1/228 (0%)
 Frame = +2

Query: 32  MATPETSREPCPDRILDDIGGAFAMGAVGGSAFHFLKGIYNSPRGERFLGGSQAVRMNAP 211
           M TPETSREPCPDRI+DDIGGAF MGAVGGSAFHF+KG+YNSP G R +GG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRIIDDIGGAFGMGAVGGSAFHFIKGVYNSPSGTRLIGGTQAVRMNAP 60

Query: 212 RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSIISGAAAGGLLQMRQGLRAASTSALAGG 391
           R+GGSFAVWGGLFS FDCS+VYLRQKEDPWNSII+GAA GG L MRQGL A+  SAL GG
Sbjct: 61  RVGGSFAVWGGLFSAFDCSMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGASGRSALFGG 120

Query: 392 VLLALIEGSQIMLHKMINESQQNMIMQQHDMXXXXXXXXXXXXXXXXXXXXXXYKASQSE 571
           VLLALIEG+ IML+K+++  Q+  IM +  +                       + + + 
Sbjct: 121 VLLALIEGAGIMLNKVMSAQQEMPIMIEDPV----PSMAGGHGSPMGQPHAHAQEGASAS 176

Query: 572 PSDSSSWFKKFKNWFGDDNKE-ESKGSGAKTEILESFDAPIPPTFEFK 712
            ++S SW   F  WFG   KE E+  SG+KTEILESFDAP  P FE+K
Sbjct: 177 GTNSGSW---FGGWFGGGKKESEANISGSKTEILESFDAPPVPNFEYK 221


>ref|XP_002283637.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Vitis vinifera]
          Length = 226

 Score =  269 bits (688), Expect = 4e-70
 Identities = 143/230 (62%), Positives = 167/230 (72%), Gaps = 3/230 (1%)
 Frame = +2

Query: 32  MATPETSREPCPDRILDDIGGAFAMGAVGGSAFHFLKGIYNSPRGERFLGGSQAVRMNAP 211
           M TPETSREPCPDRILDD+GGAF MGAVGGSAFHFLKGIYNSP+GER +GGSQAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAP 60

Query: 212 RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSIISGAAAGGLLQMRQGLRAASTSALAGG 391
           R+GGSFAVWGGLFS FDC++VY+RQKEDPWNSII+GAA GG LQMRQGL A++ SA+ GG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120

Query: 392 VLLALIEGSQIMLHKMINESQQNMIMQQHDMXXXXXXXXXXXXXXXXXXXXXXYKASQSE 571
           VLL LIEG+ IML+K+++ + QN+ M   +                             E
Sbjct: 121 VLLGLIEGAGIMLNKVLS-APQNLPMTMEEPVPGMTPGPVSGYPMGQLPGMTPPAPPAPE 179

Query: 572 PSD-SSSWFKKFKNWFGDDNKEE-SKGSGAKTEILESFDAPIP-PTFEFK 712
           PS  SSSW   F   FG   K+E +  SG+KTEILESFD P P P+FE+K
Sbjct: 180 PSSGSSSW---FGGLFGGGKKQEPAANSGSKTEILESFDTPTPMPSFEYK 226


>ref|XP_004157888.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           Tim17-like [Cucumis sativus]
          Length = 237

 Score =  265 bits (678), Expect = 5e-69
 Identities = 140/240 (58%), Positives = 166/240 (69%), Gaps = 13/240 (5%)
 Frame = +2

Query: 32  MATPETSREPCPDRILDDIGGAFAMGAVGGSAFHFLKGIYNSPRGERFLGGSQAVRMNAP 211
           M TPETSREPCPDRILDDIGGAF MGAVGGSAFHF+KG+YNSPRG R +GG+QAVRMNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGLYNSPRGTRIIGGTQAVRMNAP 60

Query: 212 RIGGSFAVWGGLFSTFDCSLVYLRQKEDPWNSIISGAAAGGLLQMRQGLRAASTSALAGG 391
           R+GGSFAVWGGLFS FDC++VY+RQKEDPWNSII+GAA GG LQMRQG  +A+ SAL GG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGPASAARSALFGG 120

Query: 392 VLLALIEGSQIMLHKMINESQQNMIMQQHDMXXXXXXXXXXXXXXXXXXXXXXYKA---- 559
           VLLALIEG+ IML+K++++ Q   ++ +                          +A    
Sbjct: 121 VLLALIEGAGIMLNKVLSQQQNMPVVIEEPAGMGGVPGYPTGQLPGRAPPMSLPQAELAS 180

Query: 560 -------SQSEPSDSSSWFKKFKNWFGDDNKEESKGS--GAKTEILESFDAPIPPTFEFK 712
                  S S  S + SW   F  WFG   K+ES+ S  G++T ILESFDAP  P FEFK
Sbjct: 181 ISSSSSSSSSSDSGNGSW---FGGWFGGGKKKESEVSSGGSETTILESFDAPPVPNFEFK 237


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