BLASTX nr result

ID: Bupleurum21_contig00010301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010301
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266658.1| PREDICTED: uncharacterized protein LOC100261...   218   6e-55
ref|XP_003564758.1| PREDICTED: uncharacterized protein LOC100842...   213   2e-53
ref|XP_002510777.1| conserved hypothetical protein [Ricinus comm...   212   6e-53
ref|XP_002329166.1| predicted protein [Populus trichocarpa] gi|2...   211   7e-53
ref|NP_001149985.1| LOC100283612 [Zea mays] gi|195635877|gb|ACG3...   207   1e-51

>ref|XP_002266658.1| PREDICTED: uncharacterized protein LOC100261996 [Vitis vinifera]
           gi|297734753|emb|CBI16987.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score =  218 bits (556), Expect = 6e-55
 Identities = 118/178 (66%), Positives = 132/178 (74%), Gaps = 9/178 (5%)
 Frame = +2

Query: 11  PLSPSP--LNYLICRTFAGKKDKGEKSPVDLPVSH-------DDFPTSGIRRPLSEILKE 163
           PLSPS   L  L+  +        +K  V +P          D  PTSGI RPLSEILKE
Sbjct: 13  PLSPSSPTLKSLLVSSLRSYAKASQKERVIVPEPEPEPERLDDVVPTSGISRPLSEILKE 72

Query: 164 INKRVPDSFVKVRKIHSDIAVKYIPWHIVNRILNLHAPEWSGEVRSITYSADGTSVSVVY 343
           ++K+VPD+ VKVR      ++KYIPWHIVNRI+NLHAPEWSGEVRSITYSADG SVSVVY
Sbjct: 73  LSKKVPDTLVKVRT-EDGFSIKYIPWHIVNRIMNLHAPEWSGEVRSITYSADGKSVSVVY 131

Query: 344 RVTLYGADAEIYRESTGTSSVQYIIGYGDPVQKAEGMAFRRACASFGLGLHLYHEDML 517
           RVTLYG DAE+YRESTGT+ V+   GYGDPVQKAE MAFRRACA FGLGLHLYHEDML
Sbjct: 132 RVTLYGTDAEMYRESTGTALVE-DTGYGDPVQKAEAMAFRRACARFGLGLHLYHEDML 188


>ref|XP_003564758.1| PREDICTED: uncharacterized protein LOC100842020 [Brachypodium
           distachyon]
          Length = 187

 Score =  213 bits (543), Expect = 2e-53
 Identities = 109/169 (64%), Positives = 129/169 (76%), Gaps = 10/169 (5%)
 Frame = +2

Query: 38  LICRTFAGKKDKGEKSPVDLPVSH---DDF-------PTSGIRRPLSEILKEINKRVPDS 187
           L+ R FA K     ++P   P+S    DDF       PT GI +PL+++L+E+ KRVPDS
Sbjct: 19  LLARPFAAKARASRQAPEPEPLSEEEEDDFSGGVEAAPTEGISKPLADVLRELGKRVPDS 78

Query: 188 FVKVRKIHSDIAVKYIPWHIVNRILNLHAPEWSGEVRSITYSADGTSVSVVYRVTLYGAD 367
            VK R   +  A+KYIPWHIVN+ILN+HAPEWSGEVR+I YS+DG SVSVVYRVTL+G D
Sbjct: 79  LVKTRLEDNGFALKYIPWHIVNKILNVHAPEWSGEVRNIIYSSDGKSVSVVYRVTLHGTD 138

Query: 368 AEIYRESTGTSSVQYIIGYGDPVQKAEGMAFRRACASFGLGLHLYHEDM 514
           AEIYRE+TGT+SVQ   G+GDPVQKAEGMAFRRACA  GLGLHLYHEDM
Sbjct: 139 AEIYREATGTASVQ-DTGFGDPVQKAEGMAFRRACARLGLGLHLYHEDM 186


>ref|XP_002510777.1| conserved hypothetical protein [Ricinus communis]
           gi|223551478|gb|EEF52964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  212 bits (539), Expect = 6e-53
 Identities = 105/135 (77%), Positives = 117/135 (86%)
 Frame = +2

Query: 113 DFPTSGIRRPLSEILKEINKRVPDSFVKVRKIHSDIAVKYIPWHIVNRILNLHAPEWSGE 292
           D PTSGI RPLSEILK+++K+VPDS V+ R +    +VKYIPWHIVNRI+NLHAPEWSGE
Sbjct: 51  DIPTSGISRPLSEILKQLHKKVPDSLVRQR-LEDGCSVKYIPWHIVNRIMNLHAPEWSGE 109

Query: 293 VRSITYSADGTSVSVVYRVTLYGADAEIYRESTGTSSVQYIIGYGDPVQKAEGMAFRRAC 472
           VR+ITYS DG SVSVVYRVTLYG DAEIYRES+GT+SV +  GYGD VQKAE MAFRRAC
Sbjct: 110 VRNITYSPDGKSVSVVYRVTLYGTDAEIYRESSGTASVDH-SGYGDAVQKAEAMAFRRAC 168

Query: 473 ASFGLGLHLYHEDML 517
           A FGLGLHLYHEDML
Sbjct: 169 ARFGLGLHLYHEDML 183


>ref|XP_002329166.1| predicted protein [Populus trichocarpa] gi|222870947|gb|EEF08078.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  211 bits (538), Expect = 7e-53
 Identities = 102/144 (70%), Positives = 120/144 (83%)
 Frame = +2

Query: 83  SPVDLPVSHDDFPTSGIRRPLSEILKEINKRVPDSFVKVRKIHSDIAVKYIPWHIVNRIL 262
           S +D    +D  PTSGI RPLSEILKE+NK+VPD+ V  R + +  ++KY+PWH+VNRI+
Sbjct: 5   SDIDDNAENDSVPTSGISRPLSEILKELNKKVPDTLVSQR-VDNGFSIKYVPWHLVNRIM 63

Query: 263 NLHAPEWSGEVRSITYSADGTSVSVVYRVTLYGADAEIYRESTGTSSVQYIIGYGDPVQK 442
           NLHAPEWSGEVR+ITYS D  SVSVVYRVTLYG DAE+YRESTGT+++   IG+GDPVQK
Sbjct: 64  NLHAPEWSGEVRNITYSPDSKSVSVVYRVTLYGTDAELYRESTGTAALDE-IGFGDPVQK 122

Query: 443 AEGMAFRRACASFGLGLHLYHEDM 514
           AE MAFRRACA FGLGLHLYHEDM
Sbjct: 123 AEAMAFRRACARFGLGLHLYHEDM 146


>ref|NP_001149985.1| LOC100283612 [Zea mays] gi|195635877|gb|ACG37407.1|
           snRK1-interacting protein 1 [Zea mays]
           gi|413951759|gb|AFW84408.1| snRK1-interacting protein 1
           [Zea mays]
          Length = 183

 Score =  207 bits (528), Expect = 1e-51
 Identities = 109/175 (62%), Positives = 127/175 (72%), Gaps = 8/175 (4%)
 Frame = +2

Query: 14  LSPSPLNYLICRTFAGKKDKGEKSPVDLPVSHD-DF-------PTSGIRRPLSEILKEIN 169
           L+P+P    + R FA K         +LP   D DF       PT GI +PL+E+LKE+ 
Sbjct: 12  LAPTPR---LARPFAAKVRASRPQEPELPSEDDNDFAGGELTAPTEGIGKPLAEVLKELG 68

Query: 170 KRVPDSFVKVRKIHSDIAVKYIPWHIVNRILNLHAPEWSGEVRSITYSADGTSVSVVYRV 349
           KRVPDS VK R  ++  A+KYIPWHIVN+ILN+HAPEWSGEVRSI YS DG +VSVVYRV
Sbjct: 69  KRVPDSLVKTRVENNGFAIKYIPWHIVNKILNIHAPEWSGEVRSIVYSFDGKTVSVVYRV 128

Query: 350 TLYGADAEIYRESTGTSSVQYIIGYGDPVQKAEGMAFRRACASFGLGLHLYHEDM 514
           TL+G DAEIYRE+TGT+SV     YGDP+QKAE MAFRRACA  GLGLHLYHEDM
Sbjct: 129 TLHGIDAEIYREATGTASVD-DTSYGDPIQKAEAMAFRRACARLGLGLHLYHEDM 182


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