BLASTX nr result

ID: Bupleurum21_contig00010284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010284
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526640.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
ref|XP_002309917.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002267135.1| PREDICTED: uncharacterized protein LOC100243...    92   4e-17
emb|CBI19938.3| unnamed protein product [Vitis vinifera]               91   7e-17
emb|CAG27628.1| hypothetical protein [Populus deltoides x Populu...    91   1e-16

>ref|XP_002526640.1| conserved hypothetical protein [Ricinus communis]
           gi|223534032|gb|EEF35752.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
 Frame = -2

Query: 325 NLIKGKFWVALAIFFKLNILVGGVQFVFYAFVAYGYGWGIW-RVVIGLSCLVVLVPIFLY 149
           NLIKG   VA+A+F  L I   G+Q +F  ++ +G+  G+  R+V+G+ CL++L  + L+
Sbjct: 226 NLIKGNIGVAVALFIMLGICFLGIQLLFEIYMVFGWPEGLGIRIVVGILCLLLLFKLILF 285

Query: 148 GLVLQTIIYFVCKSHHNETIDKPTLSKHLGEYERLFDP---TEVQME 17
           GLV+QT++YFVCKSHHNE IDK  LS HL  Y   + P     VQME
Sbjct: 286 GLVIQTVLYFVCKSHHNENIDKSILSDHLEAYLGDYVPLKAANVQME 332


>ref|XP_002309917.1| predicted protein [Populus trichocarpa] gi|222852820|gb|EEE90367.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
 Frame = -2

Query: 322 LIKGKFWVALAIFFKLNILVGGVQFVFYAFVAYGYGWGIWRVVIGLSCLVVLVPIFLYGL 143
           LIKGK  +A+AIF  + I   G+QF+F  FV   +   I R+ +GL CL++L  + L+GL
Sbjct: 227 LIKGKMGIAVAIFIVVGICFVGIQFLFETFVVLEWTMEI-RIGMGLLCLLLLFKVILFGL 285

Query: 142 VLQTIIYFVCKSHHNETIDKPTLSKH----LGEYERLFDPTEVQME 17
           V+QT++YFVCKS+H+E IDK +LS H    LGEY  L    +VQME
Sbjct: 286 VIQTVLYFVCKSYHHENIDKSSLSDHLEVYLGEYIPL-KSKDVQME 330


>ref|XP_002267135.1| PREDICTED: uncharacterized protein LOC100243726 [Vitis vinifera]
          Length = 332

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/107 (50%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
 Frame = -2

Query: 322 LIKGKFWVALAIFFKLNILVGGVQFVFYAFVAYGYGWGIW-RVVIGLSCLVVLVPIFLYG 146
           LI+GK  VA+ IF KLNI +  ++  F   V YG   G+  RV  G+ C ++L  +FL+G
Sbjct: 223 LIRGKLVVAIVIFLKLNISLFVIKIAFERLVVYGASLGMANRVGYGILCFLLLFKLFLFG 282

Query: 145 LVLQTIIYFVCKSHHNETIDKPTLSKHL----GEYERLFDPTEVQME 17
           LVLQTIIYFVCKS+H+E IDK  LS HL    GEY  L    +VQ+E
Sbjct: 283 LVLQTIIYFVCKSYHHENIDKSALSDHLEVYMGEYVPL-KAKDVQLE 328


>emb|CBI19938.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = -2

Query: 322 LIKGKFWVALAIFFKLNILVGGVQFVFYAFVAYGYGWGIW-RVVIGLSCLVVLVPIFLYG 146
           LI+GK  VA+ IF KLNI +  ++  F   V YG   G+  RV  G+ C ++L  +FL+G
Sbjct: 154 LIRGKLVVAIVIFLKLNISLFVIKIAFERLVVYGASLGMANRVGYGILCFLLLFKLFLFG 213

Query: 145 LVLQTIIYFVCKSHHNETIDKPTLSKHLGEYERLFDPTEVQ 23
           LVLQTIIYFVCKS+H+E IDK  LS HL  Y   + P + +
Sbjct: 214 LVLQTIIYFVCKSYHHENIDKSALSDHLEVYMGEYVPLKAK 254


>emb|CAG27628.1| hypothetical protein [Populus deltoides x Populus maximowiczii]
          Length = 138

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
 Frame = -2

Query: 322 LIKGKFWVALAIFFKLNILVGGVQFVFYAFVAYGYGWGIW-RVVIGLSCLVVLVPIFLYG 146
           L+KGK WVA+ IFFKLN+    +  +F   V +G   GI  R   G+  L++L+ ++L+G
Sbjct: 29  LLKGKMWVAIIIFFKLNLSSLALHILFENKVVHGSSLGILNRASFGILSLLMLLVLYLFG 88

Query: 145 LVLQTIIYFVCKSHHNETIDKPTLSKH----LGEYERLFDPTEVQME 17
           LV+QT+IYFVCKS+H+E IDK  LS H    LGEY  L    +VQ+E
Sbjct: 89  LVIQTVIYFVCKSYHHENIDKSALSDHLEVYLGEYVPL-KSKDVQLE 134


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