BLASTX nr result

ID: Bupleurum21_contig00010280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010280
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform ...   286   4e-75
emb|CAA98168.1| RAB7A [Lotus japonicus]                               285   6e-75
ref|XP_002300895.1| predicted protein [Populus trichocarpa] gi|1...   284   1e-74
ref|XP_002527104.1| protein with unknown function [Ricinus commu...   281   1e-73
ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycin...   279   5e-73

>ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
           gi|297739360|emb|CBI29350.3| unnamed protein product
           [Vitis vinifera]
          Length = 205

 Score =  286 bits (731), Expect = 4e-75
 Identities = 134/144 (93%), Positives = 140/144 (97%)
 Frame = +2

Query: 2   WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPADPKTFPFI 181
           WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANP+DPKTFPFI
Sbjct: 62  WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPFI 121

Query: 182 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLSIAKSALANEH 361
           LLGNKIDIDGGNSRVVS+KKA+DWCASKGNIPYFETSAKEDYNVDAAFL IAK+ALANEH
Sbjct: 122 LLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANEH 181

Query: 362 DQDIYFQGIPDAVPVTEQRGGCAC 433
           +QDIYFQGIP+AV  TEQ GGCAC
Sbjct: 182 EQDIYFQGIPEAVSETEQGGGCAC 205


>emb|CAA98168.1| RAB7A [Lotus japonicus]
          Length = 205

 Score =  285 bits (729), Expect = 6e-75
 Identities = 132/144 (91%), Positives = 138/144 (95%)
 Frame = +2

Query: 2   WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPADPKTFPFI 181
           WDTAGQERFQSLGVAFYRGADCCVLVYDVNVM+SFDTLDNWHEEFLKQANP+DP+TFPFI
Sbjct: 62  WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSDPRTFPFI 121

Query: 182 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLSIAKSALANEH 361
           LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFL IAK+ALANEH
Sbjct: 122 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANEH 181

Query: 362 DQDIYFQGIPDAVPVTEQRGGCAC 433
           DQDIYFQ IP+A P  EQ+GGC C
Sbjct: 182 DQDIYFQAIPEAAPENEQKGGCQC 205


>ref|XP_002300895.1| predicted protein [Populus trichocarpa] gi|118486942|gb|ABK95304.1|
           unknown [Populus trichocarpa]
           gi|222842621|gb|EEE80168.1| predicted protein [Populus
           trichocarpa]
          Length = 205

 Score =  284 bits (726), Expect = 1e-74
 Identities = 133/144 (92%), Positives = 138/144 (95%)
 Frame = +2

Query: 2   WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPADPKTFPFI 181
           WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQA P+DP+TFPFI
Sbjct: 62  WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQATPSDPRTFPFI 121

Query: 182 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLSIAKSALANEH 361
           LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVD AFLSIAK ALANEH
Sbjct: 122 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDPAFLSIAKIALANEH 181

Query: 362 DQDIYFQGIPDAVPVTEQRGGCAC 433
           +QDIYFQGIP+A   +EQRGGCAC
Sbjct: 182 EQDIYFQGIPEAASESEQRGGCAC 205


>ref|XP_002527104.1| protein with unknown function [Ricinus communis]
           gi|223533527|gb|EEF35267.1| protein with unknown
           function [Ricinus communis]
          Length = 205

 Score =  281 bits (718), Expect = 1e-73
 Identities = 132/144 (91%), Positives = 137/144 (95%)
 Frame = +2

Query: 2   WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPADPKTFPFI 181
           WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFD LDNWHEEFLKQANP DPKTFPFI
Sbjct: 62  WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQANPPDPKTFPFI 121

Query: 182 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLSIAKSALANEH 361
           LLGNKIDIDGGNSRVVSEKKAK+WCASKGNIPYFETSAKEDYNVD AFL IAK+ALANE 
Sbjct: 122 LLGNKIDIDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFLCIAKTALANER 181

Query: 362 DQDIYFQGIPDAVPVTEQRGGCAC 433
           +QDIYFQGIP+AV  +EQRGGCAC
Sbjct: 182 EQDIYFQGIPEAVSESEQRGGCAC 205


>ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
           gi|255626217|gb|ACU13453.1| unknown [Glycine max]
          Length = 206

 Score =  279 bits (713), Expect = 5e-73
 Identities = 131/145 (90%), Positives = 138/145 (95%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPADPKTFPFI 181
           WDTAGQERFQSLGVAFYRGADCCVLVYDVNVM+SFDTL+NWHEEFLKQANP DP+ FPFI
Sbjct: 62  WDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPFI 121

Query: 182 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLSIAKSALANEH 361
           LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFL IAK+ALANEH
Sbjct: 122 LLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKAALANEH 181

Query: 362 DQDIYFQGIPD-AVPVTEQRGGCAC 433
           +QDIYFQG+P+ AVP  EQR GCAC
Sbjct: 182 EQDIYFQGVPEAAVPENEQRSGCAC 206


Top