BLASTX nr result

ID: Bupleurum21_contig00010273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010273
         (1776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]                 61   8e-07
tpg|DAA53967.1| TPA: importin alpha-1b subunit [Zea mays]              60   1e-06
gb|AFW81447.1| hypothetical protein ZEAMMB73_731576 [Zea mays] g...    60   2e-06
ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [G...    60   2e-06
dbj|BAJ91150.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   3e-06

>gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]
          Length = 156

 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 34/76 (44%), Positives = 44/76 (57%)
 Frame = -1

Query: 1578 DQFFKDVDPVTLFDLIQEAHHFRNKSLMDLTCQTLVSMVKRKSATEIKTKFIINQDYDWI 1399
            DQ F  VD  TLFDLI  A++   KSL+DLTCQT+  M+K K+  EI+  F IN D+   
Sbjct: 83   DQEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNINNDF--- 139

Query: 1398 NNRKPSQSITRRREKE 1351
                P +    RRE +
Sbjct: 140  ---TPEEEEEVRRENQ 152


>tpg|DAA53967.1| TPA: importin alpha-1b subunit [Zea mays]
          Length = 526

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 65/239 (27%), Positives = 99/239 (41%), Gaps = 1/239 (0%)
 Frame = -1

Query: 945 AVFTLTNIAKALPKFIVDILKSGALERVNSVLLARGTATGVMMNHIAMFLAAVCRTGDLS 766
           AV+ L N+A   PK    +L +GAL  + + L      +  M+ +    L+  CR     
Sbjct: 175 AVWALGNVAGDSPKCRDLVLANGALMPLLAQLNEHAKLS--MLRNATWTLSNFCRGKPQP 232

Query: 765 HLDKVDVALTTLQSLFEAREFRFRKHHIEEACHAFQYLTYGXXXXXXXXXXXXXXXXXXX 586
             D+   AL  L  L  + +    +  + +AC A  YL+ G                   
Sbjct: 233 SFDQTKPALPALARLIHSND----EEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVE 288

Query: 585 XIRDP-PRGNCPFPGYALGVIGNIAIWGSLDQIKILTSNSTILESLGMVMMAGSKEIQKE 409
            +  P P    P    AL  +GNI + G   Q + +  +  +   L ++     K I+KE
Sbjct: 289 LLLHPSPSVLIP----ALRTVGNI-VTGDDQQTQCIIDHQALPRLLNLLTQNHKKSIKKE 343

Query: 408 ACQIISNIAARMEGLIEKMHTAGLIELLCRXXXXXXXXXXXEFDVKMEATWAIYNGIYG 232
           AC  ISNI A  +  I+ + +AG+I  L +           EFD+K EA WAI N   G
Sbjct: 344 ACWTISNITAGNKDQIQAVISAGIIAPLLQ------LLQGAEFDIKKEAAWAISNATSG 396


>gb|AFW81447.1| hypothetical protein ZEAMMB73_731576 [Zea mays]
           gi|413948799|gb|AFW81448.1| hypothetical protein
           ZEAMMB73_731576 [Zea mays]
          Length = 529

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 67/251 (26%), Positives = 103/251 (41%)
 Frame = -1

Query: 984 KVFNECNYAMTHLAVFTLTNIAKALPKFIVDILKSGALERVNSVLLARGTATGVMMNHIA 805
           K+ N  +  +   AV+ L N+A   PK    +L  G L  +   L      +  M+ +  
Sbjct: 167 KLLNSLSEDVREQAVWALGNVAGDSPKCRDLVLGHGGLYPLLQQLNEHAKLS--MLRNAT 224

Query: 804 MFLAAVCRTGDLSHLDKVDVALTTLQSLFEAREFRFRKHHIEEACHAFQYLTYGXXXXXX 625
             L+  CR     + D+V  AL  LQ L  +++    +  + +AC A  YL+ G      
Sbjct: 225 WTLSNFCRGKPQPNFDQVKPALPALQHLIHSQD----EEVLTDACWALSYLSDGTNDKIQ 280

Query: 624 XXXXXXXXXXXXXXIRDPPRGNCPFPGYALGVIGNIAIWGSLDQIKILTSNSTILESLGM 445
                         +  P   +   P  AL  +GNI + G   Q + +  N  +   L +
Sbjct: 281 AVIESGVFPRLVELLMHPS-ASVLIP--ALRTVGNI-VTGDDMQTQCVIDNQALPCLLNL 336

Query: 444 VMMAGSKEIQKEACQIISNIAARMEGLIEKMHTAGLIELLCRXXXXXXXXXXXEFDVKME 265
           +     K I+KEAC  ISNI A  +  I+ +  A +I  L +           EFD+K E
Sbjct: 337 LTTNHKKSIKKEACWTISNITAGNKEQIQAVINANIIAPLVQ------LLQTAEFDIKKE 390

Query: 264 ATWAIYNGIYG 232
           A WAI N   G
Sbjct: 391 AAWAISNATSG 401


>ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [Glycine max]
          Length = 532

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 5/256 (1%)
 Frame = -1

Query: 984 KVFNECNYAMTHLAVFTLTNIAKALPKFIVDILKSGALERVNSVLLARGTATGVMMNHIA 805
           K+    N  +   AV+ L N+A   P+    +L  GAL  + + L      +  M+ +  
Sbjct: 167 KLLGSPNDDVREQAVWALGNVAGDSPRCRDLVLGDGALLPLLAQLNEHAKLS--MLRNAT 224

Query: 804 MFLAAVCRTGDLSHLDKVDVALTTLQSLFEAREFRFRKHHIEEACHAFQYLTYGXXXXXX 625
             L+  CR       D+V  AL  L SL ++ +    +  + +AC A  YL+ G      
Sbjct: 225 WTLSNFCRGKPQPAFDQVKPALPALASLIQSTD----EEVLTDACWALSYLSDGTNDKIQ 280

Query: 624 XXXXXXXXXXXXXXIRDP-PRGNCPFPGYALGVIGNIAIWGSLDQIKILTSNSTILESLG 448
                         +  P P    P    AL  +GNI     L Q +++ ++  +   L 
Sbjct: 281 GVIEAGVCSRLVELLLHPSPSVLIP----ALRTVGNIVTGDDL-QTEVIINHQALSRLLN 335

Query: 447 MVMMAGSKEIQKEACQIISNIAA----RMEGLIEKMHTAGLIELLCRXXXXXXXXXXXEF 280
           ++     K I+KEAC  ISNI A    +++ +IE    A L+ LL             EF
Sbjct: 336 LLTNNYKKSIKKEACWTISNITAGNKKQIQDVIEASIIAPLVHLL----------QNAEF 385

Query: 279 DVKMEATWAIYNGIYG 232
           D+K EA WAI N   G
Sbjct: 386 DIKKEAAWAISNATSG 401


>dbj|BAJ91150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 169

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 35/86 (40%), Positives = 46/86 (53%)
 Frame = -1

Query: 1608 PPCNYCSNHDDQFFKDVDPVTLFDLIQEAHHFRNKSLMDLTCQTLVSMVKRKSATEIKTK 1429
            PP +   N D +F K VD  TLFDLI  A+    K L+DLTCQT+  M+K K+  EI+  
Sbjct: 87   PPADDLKNWDAEFVK-VDQATLFDLILAANFLNIKGLLDLTCQTVADMIKGKTPEEIRKT 145

Query: 1428 FIINQDYDWINNRKPSQSITRRREKE 1351
            F I  D+       P +    RRE +
Sbjct: 146  FNIKNDF------TPDEEEEIRRENQ 165


Top