BLASTX nr result

ID: Bupleurum21_contig00010261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010261
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y su...   216   1e-54
ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [...   214   8e-54
ref|XP_003623108.1| Nuclear transcription factor Y subunit B-3, ...   214   8e-54
ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y su...   213   2e-53

>ref|XP_004137802.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Cucumis
           sativus]
          Length = 173

 Score =  216 bits (551), Expect = 1e-54
 Identities = 107/124 (86%), Positives = 115/124 (92%)
 Frame = -3

Query: 409 DVPASPGGYGSPESGDQSPTTSYKEQDRFLPIANISRIMKKGLPANGKIAKESKEIVQEC 230
           D PASPGG GS ESG+QSP ++ +EQDRFLPIANISRIMKK LPANGKIAK++KE VQEC
Sbjct: 3   DAPASPGG-GSHESGEQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQEC 61

Query: 229 VSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKTYLARYRELEGDTK 50
           VSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYIDPLKTYL +YRE EGDTK
Sbjct: 62  VSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKTYLTKYRETEGDTK 121

Query: 49  GSAK 38
           GSAK
Sbjct: 122 GSAK 125


>ref|XP_002322853.1| predicted protein [Populus trichocarpa] gi|222867483|gb|EEF04614.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  215 bits (547), Expect = 3e-54
 Identities = 111/141 (78%), Positives = 121/141 (85%), Gaps = 5/141 (3%)
 Frame = -3

Query: 418 MTTDVPASPGGYGSPESGDQSP--TTSYKEQDRFLPIANISRIMKKGLPANGKIAKESKE 245
           M  + PASPGG GS ESGDQSP   ++ +EQDRFLPIANISRIMKK LPANGKIAK++KE
Sbjct: 1   MAAEAPASPGG-GSHESGDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAKE 59

Query: 244 IVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKTYLARYREL 65
            VQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYIDPLK YL+RYRE+
Sbjct: 60  TVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYREM 119

Query: 64  EGDTKGSAKKEPVGAQ---HP 11
           EGDTKGSAK     A+   HP
Sbjct: 120 EGDTKGSAKTGDTSAKKDIHP 140


>ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355500590|gb|AES81793.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523199|gb|AFK49652.1| nuclear transcription factor
           Y subunit B2 [Medicago truncatula]
          Length = 171

 Score =  214 bits (544), Expect = 8e-54
 Identities = 107/137 (78%), Positives = 118/137 (86%)
 Frame = -3

Query: 412 TDVPASPGGYGSPESGDQSPTTSYKEQDRFLPIANISRIMKKGLPANGKIAKESKEIVQE 233
           ++ PASPGG GS ESG+ SP ++ +EQDRFLPIANISRIMKK LPANGKIAK++KE VQE
Sbjct: 2   SETPASPGG-GSHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 232 CVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKTYLARYRELEGDT 53
           CVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYIDPLK YL RYRE+EGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDT 120

Query: 52  KGSAKKEPVGAQHPNQQ 2
           KGSAK      +   QQ
Sbjct: 121 KGSAKGGDTSGKKDVQQ 137


>ref|XP_003623108.1| Nuclear transcription factor Y subunit B-3, partial [Medicago
           truncatula] gi|355498123|gb|AES79326.1| Nuclear
           transcription factor Y subunit B-3, partial [Medicago
           truncatula]
          Length = 474

 Score =  214 bits (544), Expect = 8e-54
 Identities = 107/137 (78%), Positives = 118/137 (86%)
 Frame = -3

Query: 412 TDVPASPGGYGSPESGDQSPTTSYKEQDRFLPIANISRIMKKGLPANGKIAKESKEIVQE 233
           ++ PASPGG GS ESG+ SP ++ +EQDRFLPIANISRIMKK LPANGKIAK++KE VQE
Sbjct: 2   SETPASPGG-GSHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQE 60

Query: 232 CVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKTYLARYRELEGDT 53
           CVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYIDPLK YL RYRE+EGDT
Sbjct: 61  CVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDT 120

Query: 52  KGSAKKEPVGAQHPNQQ 2
           KGSAK      +   QQ
Sbjct: 121 KGSAKGGDTSGKKDVQQ 137


>ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Glycine
           max]
          Length = 171

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/124 (84%), Positives = 114/124 (91%)
 Frame = -3

Query: 409 DVPASPGGYGSPESGDQSPTTSYKEQDRFLPIANISRIMKKGLPANGKIAKESKEIVQEC 230
           D PASPGG GS ESGD SP ++ +EQDR+LPIANISRIMKK LPANGKIAK++KE VQEC
Sbjct: 3   DGPASPGG-GSHESGDHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQEC 61

Query: 229 VSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKTYLARYRELEGDTK 50
           VSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDY+DPLK YL RYRE+EGDTK
Sbjct: 62  VSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREMEGDTK 121

Query: 49  GSAK 38
           GSAK
Sbjct: 122 GSAK 125


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