BLASTX nr result

ID: Bupleurum21_contig00010233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010233
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887376.1| hypothetical protein ARALYDRAFT_476280 [Arab...   207   3e-67
ref|XP_003634942.1| PREDICTED: uncharacterized protein LOC100248...   206   1e-66
ref|NP_565018.1| Rieske (2Fe-2S) domain-containing protein [Arab...   204   2e-66
ref|XP_002528040.1| oxidoreductase, putative [Ricinus communis] ...   209   1e-65
ref|XP_002334345.1| predicted protein [Populus trichocarpa] gi|2...   207   3e-65

>ref|XP_002887376.1| hypothetical protein ARALYDRAFT_476280 [Arabidopsis lyrata subsp.
           lyrata] gi|297333217|gb|EFH63635.1| hypothetical protein
           ARALYDRAFT_476280 [Arabidopsis lyrata subsp. lyrata]
          Length = 286

 Score =  207 bits (528), Expect(2) = 3e-67
 Identities = 111/198 (56%), Positives = 136/198 (68%), Gaps = 4/198 (2%)
 Frame = +1

Query: 70  ASAALKLSPTFHPIPPSQLSKRALNFLPFISTSFTNCKTRTNILISRTSQLVEKSKKNS- 246
           AS++L  + +F P  P   S R    LP           R N  ++ T +L + SK+ S 
Sbjct: 5   ASSSLPRNYSFTPPRPPPSSIRGPGTLPLY--------LRRNRRLALTYRLDQNSKRRSG 56

Query: 247 ---LVCEATQXXXXXXXXXXXXXXXKNWIPVVPLAALPKGERRVIIQNDENILLLWYKDE 417
              + CEAT+               +NW+PVVPL+ALPKGERRV+IQ+DE ILLLWYK++
Sbjct: 57  GGNVRCEATEVSSSSSVSTPG----RNWVPVVPLSALPKGERRVVIQDDETILLLWYKND 112

Query: 418 VLAIENRSPAEGAYTEGLRNAKLTQDGCIVCPTTDSTFDLRTGAVKDWYPKNPVLRALTP 597
           V AIENRSPAEGAY+EGL NA+LTQDGCIVCP+TDSTFDLRTG +++WYPKNPVLR LTP
Sbjct: 113 VFAIENRSPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRTGEIREWYPKNPVLRVLTP 172

Query: 598 ILRTLYVYPVKTDSENIY 651
            LR L+VYPVK D ENIY
Sbjct: 173 ALRKLFVYPVKYDEENIY 190



 Score = 74.7 bits (182), Expect(2) = 3e-67
 Identities = 37/68 (54%), Positives = 46/68 (67%)
 Frame = +2

Query: 770 ATNVNVEEVRMVVDDDFQAFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXXD 949
           ATNVNV+EVRM+VD+  + FGFT +NE+INGKAA+IG L LLD                D
Sbjct: 217 ATNVNVDEVRMIVDEGSEGFGFTVKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLD 276

Query: 950 FIYAASDA 973
           F+Y+ASDA
Sbjct: 277 FLYSASDA 284


>ref|XP_003634942.1| PREDICTED: uncharacterized protein LOC100248314 isoform 2 [Vitis
           vinifera] gi|297741042|emb|CBI31354.3| unnamed protein
           product [Vitis vinifera]
          Length = 280

 Score =  206 bits (523), Expect(2) = 1e-66
 Identities = 100/148 (67%), Positives = 114/148 (77%)
 Frame = +1

Query: 208 RTSQLVEKSKKNSLVCEATQXXXXXXXXXXXXXXXKNWIPVVPLAALPKGERRVIIQNDE 387
           R+S L        + C+AT+                NW+PVVPL+ALPKGERRVIIQ+ E
Sbjct: 39  RSSALTLGLSSRRITCKATEVSVAEESSAAGDGG--NWVPVVPLSALPKGERRVIIQDGE 96

Query: 388 NILLLWYKDEVLAIENRSPAEGAYTEGLRNAKLTQDGCIVCPTTDSTFDLRTGAVKDWYP 567
            ILLLWYKD+V AIENRSPAEGAY+EGL NAKLTQDGCIVCPTTDSTFDL+TG +KDWYP
Sbjct: 97  TILLLWYKDQVYAIENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYP 156

Query: 568 KNPVLRALTPILRTLYVYPVKTDSENIY 651
           KNPVLR LTP LRTL++YPVKTD +NIY
Sbjct: 157 KNPVLRVLTPALRTLFIYPVKTDDKNIY 184



 Score = 74.7 bits (182), Expect(2) = 1e-66
 Identities = 37/68 (54%), Positives = 46/68 (67%)
 Frame = +2

Query: 770 ATNVNVEEVRMVVDDDFQAFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXXD 949
           AT+VNVEEVRM+VD+D + FGFT +NELINGKAA++G L LLD                D
Sbjct: 211 ATDVNVEEVRMIVDEDQEGFGFTGKNELINGKAAVVGFLLLLDFELLTGKGILKGTGFLD 270

Query: 950 FIYAASDA 973
           F+YA S+A
Sbjct: 271 FLYAVSNA 278


>ref|NP_565018.1| Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana]
           gi|12323736|gb|AAG51832.1|AC016163_21 unknown protein;
           39989-38742 [Arabidopsis thaliana]
           gi|20260264|gb|AAM13030.1| unknown protein [Arabidopsis
           thaliana] gi|21592833|gb|AAM64783.1| unknown
           [Arabidopsis thaliana] gi|22136512|gb|AAM91334.1|
           unknown protein [Arabidopsis thaliana]
           gi|26453214|dbj|BAC43681.1| unknown protein [Arabidopsis
           thaliana] gi|332197087|gb|AEE35208.1| Rieske (2Fe-2S)
           domain-containing protein [Arabidopsis thaliana]
          Length = 287

 Score =  204 bits (519), Expect(2) = 2e-66
 Identities = 101/158 (63%), Positives = 122/158 (77%), Gaps = 3/158 (1%)
 Frame = +1

Query: 187 RTNILISRTSQLVEKSKKNS---LVCEATQXXXXXXXXXXXXXXXKNWIPVVPLAALPKG 357
           R N  ++ T +L + SK+ S   + CEAT+               +NW+PVVPL+ALPKG
Sbjct: 38  RRNRRVALTYRLDQNSKQRSGGNVRCEATEVSSSSSVSTPG----RNWVPVVPLSALPKG 93

Query: 358 ERRVIIQNDENILLLWYKDEVLAIENRSPAEGAYTEGLRNAKLTQDGCIVCPTTDSTFDL 537
           ERRV+IQ+DE ILLLWYK++V AIENRSPAEGAY+EGL NA+LTQDGCIVCP+TDSTFDL
Sbjct: 94  ERRVVIQDDETILLLWYKNDVFAIENRSPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDL 153

Query: 538 RTGAVKDWYPKNPVLRALTPILRTLYVYPVKTDSENIY 651
           RTG +++WYPKNPVLR LTP LR L+VYPVK D ENIY
Sbjct: 154 RTGEIREWYPKNPVLRVLTPALRKLFVYPVKYDEENIY 191



 Score = 75.9 bits (185), Expect(2) = 2e-66
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = +2

Query: 770 ATNVNVEEVRMVVDDDFQAFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXXD 949
           ATNVNV+EVRM+VD+  + FGFT++NE+INGKAA+IG L LLD                D
Sbjct: 218 ATNVNVDEVRMIVDEGSEGFGFTKKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLD 277

Query: 950 FIYAASDA 973
           F+Y+ASDA
Sbjct: 278 FLYSASDA 285


>ref|XP_002528040.1| oxidoreductase, putative [Ricinus communis]
           gi|223532570|gb|EEF34358.1| oxidoreductase, putative
           [Ricinus communis]
          Length = 280

 Score =  209 bits (533), Expect(2) = 1e-65
 Identities = 97/113 (85%), Positives = 105/113 (92%)
 Frame = +1

Query: 313 KNWIPVVPLAALPKGERRVIIQNDENILLLWYKDEVLAIENRSPAEGAYTEGLRNAKLTQ 492
           +NW+PVVPLAALP+GERRVIIQ+ E ILLLWYKD+V AIENRSPAEGAY+EGL NAKLTQ
Sbjct: 72  ENWVPVVPLAALPRGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYSEGLLNAKLTQ 131

Query: 493 DGCIVCPTTDSTFDLRTGAVKDWYPKNPVLRALTPILRTLYVYPVKTDSENIY 651
           DGCIVCPTTDSTFDLR GA+KDWYPKNPVLRALTP LR LYVYP+KTD ENIY
Sbjct: 132 DGCIVCPTTDSTFDLRNGAIKDWYPKNPVLRALTPPLRALYVYPIKTDEENIY 184



 Score = 67.8 bits (164), Expect(2) = 1e-65
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = +2

Query: 770 ATNVNVEEVRMVVDDDFQAFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXXD 949
           A++VNV+EVRMVVD++ + FGFT +NELINGKAA+IG L LLD                D
Sbjct: 211 ASDVNVDEVRMVVDENQEGFGFTGKNELINGKAAVIGFLLLLDFELLTGKGLLKGIGFLD 270

Query: 950 FIYAASDA 973
           F+Y  ++A
Sbjct: 271 FLYGITNA 278


>ref|XP_002334345.1| predicted protein [Populus trichocarpa] gi|222871289|gb|EEF08420.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  207 bits (528), Expect(2) = 3e-65
 Identities = 100/135 (74%), Positives = 111/135 (82%)
 Frame = +1

Query: 247 LVCEATQXXXXXXXXXXXXXXXKNWIPVVPLAALPKGERRVIIQNDENILLLWYKDEVLA 426
           +VC+AT+               +NW+PVVPL ALPKGERRVIIQ+ E ILLLWYKD+V A
Sbjct: 62  IVCKATEVSLTEESPSSGG---ENWVPVVPLTALPKGERRVIIQDGETILLLWYKDQVYA 118

Query: 427 IENRSPAEGAYTEGLRNAKLTQDGCIVCPTTDSTFDLRTGAVKDWYPKNPVLRALTPILR 606
           IENRSPAEGAYTEGL NAKLTQDGCIVCP+TDSTFDLRTGA+K+WYP NPVLR LTP LR
Sbjct: 119 IENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGAIKEWYPNNPVLRVLTPALR 178

Query: 607 TLYVYPVKTDSENIY 651
           TL+VYPVKTD ENIY
Sbjct: 179 TLFVYPVKTDEENIY 193



 Score = 68.2 bits (165), Expect(2) = 3e-65
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = +2

Query: 770 ATNVNVEEVRMVVDDDFQAFGFTERNELINGKAAIIGLLCLLDXXXXXXXXXXXXXXXXD 949
           A++VNV+EVRMV+D+  + FGFT +NELING+AAIIG L L+D                D
Sbjct: 220 ASDVNVDEVRMVIDEGQEGFGFTSKNELINGQAAIIGFLFLIDFELLTGKGVLKGTGFLD 279

Query: 950 FIYAASD 970
           F+YAAS+
Sbjct: 280 FLYAASN 286


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