BLASTX nr result
ID: Bupleurum21_contig00010228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00010228
(1874 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vi... 763 0.0
ref|XP_004172420.1| PREDICTED: histidine--tRNA ligase-like [Cucu... 747 0.0
ref|XP_004138662.1| PREDICTED: histidine--tRNA ligase-like [Cucu... 747 0.0
ref|XP_002525505.1| histidyl-tRNA synthetase, putative [Ricinus ... 739 0.0
ref|XP_002325939.1| predicted protein [Populus trichocarpa] gi|2... 726 0.0
>ref|XP_002271456.2| PREDICTED: histidyl-tRNA synthetase-like [Vitis vinifera]
Length = 890
Score = 763 bits (1971), Expect = 0.0
Identities = 388/511 (75%), Positives = 438/511 (85%), Gaps = 15/511 (2%)
Frame = +3
Query: 96 GTTAFMQYLQDRLQ------VTVAGKIEEWVQQFFSILDPKDPFYVSLLEKVKDIVDSNE 257
GT+ +Q +++RLQ V + + +WV+ S LD KDP + SLL KVK+I++SNE
Sbjct: 380 GTSVIVQLVKERLQSGGGDAVDASSLLGKWVEGVHSFLDLKDPEFDSLLMKVKEILESNE 439
Query: 258 SRRLPKLPKGTRDFAKEQMAVREKAFSIISKVFKRHGATALDTPAFEMRETLMGKYGEDS 437
SRRLPKLPKGTRDFAKEQMAVREKAFSII VFKRHGA ALDTP FE+RETLMGKYGEDS
Sbjct: 440 SRRLPKLPKGTRDFAKEQMAVREKAFSIIGDVFKRHGAMALDTPVFELRETLMGKYGEDS 499
Query: 438 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQ 617
KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQ
Sbjct: 500 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQ 559
Query: 618 CDFDIAGQFEKMGPDFEIIKILTELLDELKIGDYE---------VKLNHRKLLDGMLDIC 770
CDFDIAGQ+E MGPDFE+IKILTELLDEL IGDY+ VKLNHRKLLDGMLDIC
Sbjct: 560 CDFDIAGQYESMGPDFEVIKILTELLDELNIGDYDFEVPPHILQVKLNHRKLLDGMLDIC 619
Query: 771 GVPPEKFRTICSSIDKLDKQPFEQIRKEMVEEKGLNTETADRIGTFVKNRGHPLKLLSEL 950
GVPPEKFRTICSSIDKLDKQ FEQI++EMVEEKGL ETA++IGTFVK RG PL+LLS+L
Sbjct: 620 GVPPEKFRTICSSIDKLDKQTFEQIKREMVEEKGLTIETAEKIGTFVKERGPPLELLSKL 679
Query: 951 KQEGSDFSRHSESLQALNELEILFKALEKSKCIDKVVFDLSLARGLDYYTGVIYEAVFKG 1130
KQEGS+F ++ S+ AL +LEILF ALEKSKCI+KVVFDLSLARGLDYYTGVI+EAVFKG
Sbjct: 680 KQEGSEFLGNNASVAALTDLEILFTALEKSKCINKVVFDLSLARGLDYYTGVIFEAVFKG 739
Query: 1131 ATQVGSIAAGGRYDKLIGMFGTKQVPAIGVSLGIERVFTIMEQIQKDQNQTVRATETQVL 1310
ATQVGSIAAGGRYD LIGMFGTKQVPA+G SLGIERVF IMEQ+QKDQNQ +RATETQVL
Sbjct: 740 ATQVGSIAAGGRYDNLIGMFGTKQVPAVGTSLGIERVFNIMEQLQKDQNQAIRATETQVL 799
Query: 1311 VSILGDDLSLAAELASECWAAGLNTEYLLNKRVMKHIDRAKDSRIPWMVIVGERELNEGV 1490
VSI G+DLS AAEL SE W A L EY++NKR KH DRA++SRIPWM++VGERE NEG+
Sbjct: 800 VSIFGNDLSQAAELVSELWNAKLKAEYMVNKRPTKHFDRAEESRIPWMILVGEREQNEGI 859
Query: 1491 VKLKDVLANKEEEVPRSQIVGELCKRVSSTA 1583
V+L+D +E VPRS+IV EL +R++ ++
Sbjct: 860 VRLRDTTTREEILVPRSRIVEELQRRLTPSS 890
>ref|XP_004172420.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
Length = 879
Score = 747 bits (1929), Expect = 0.0
Identities = 374/495 (75%), Positives = 429/495 (86%), Gaps = 2/495 (0%)
Frame = +3
Query: 96 GTTAFMQYLQDRLQVTVAG--KIEEWVQQFFSILDPKDPFYVSLLEKVKDIVDSNESRRL 269
GT+ +Q ++D+LQ G +E V+ S LDPK + +LL+K+KDIV+SNESRRL
Sbjct: 384 GTSVVVQSIKDKLQGNGGGLGSLENLVKDLLSFLDPKASGFDNLLKKIKDIVESNESRRL 443
Query: 270 PKLPKGTRDFAKEQMAVREKAFSIISKVFKRHGATALDTPAFEMRETLMGKYGEDSKLIY 449
PKLPKGTRDFAKEQM +R++AFSII VF+RHGAT LDTPAFE+RETL GKYGEDSKLI+
Sbjct: 444 PKLPKGTRDFAKEQMTIRKQAFSIIESVFERHGATTLDTPAFELRETLTGKYGEDSKLIF 503
Query: 450 DLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCDFD 629
DLADQGGEL SLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCD D
Sbjct: 504 DLADQGGELYSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCDLD 563
Query: 630 IAGQFEKMGPDFEIIKILTELLDELKIGDYEVKLNHRKLLDGMLDICGVPPEKFRTICSS 809
IAG +EKMGPDFE+IKILTELLDEL IG+YE+KLNHRKLLDGML+ICGVPPEKFRTICSS
Sbjct: 564 IAGHYEKMGPDFEVIKILTELLDELNIGEYEIKLNHRKLLDGMLEICGVPPEKFRTICSS 623
Query: 810 IDKLDKQPFEQIRKEMVEEKGLNTETADRIGTFVKNRGHPLKLLSELKQEGSDFSRHSES 989
IDKLDKQ F+QI++EMVEEKGL E A+RIG FVK RGHPL LLS+LKQE S ++ S
Sbjct: 624 IDKLDKQSFDQIKREMVEEKGLTVEVAERIGNFVKERGHPLDLLSKLKQEQSALLQNKGS 683
Query: 990 LQALNELEILFKALEKSKCIDKVVFDLSLARGLDYYTGVIYEAVFKGATQVGSIAAGGRY 1169
AL+EL+ILF ALEKSKCIDKVVFDLSLARGLDYYTGVIYEA+FKG TQVGSIAAGGR+
Sbjct: 684 SDALSELDILFSALEKSKCIDKVVFDLSLARGLDYYTGVIYEAIFKGGTQVGSIAAGGRF 743
Query: 1170 DKLIGMFGTKQVPAIGVSLGIERVFTIMEQIQKDQNQTVRATETQVLVSILGDDLSLAAE 1349
D LIGMFG+KQ+PA+G+SLGIERV IMEQI KDQN+ VRAT+T VLVSILGDDL+LAAE
Sbjct: 744 DNLIGMFGSKQIPAVGISLGIERVLVIMEQILKDQNKAVRATKTDVLVSILGDDLTLAAE 803
Query: 1350 LASECWAAGLNTEYLLNKRVMKHIDRAKDSRIPWMVIVGERELNEGVVKLKDVLANKEEE 1529
LASE W A LN E+L+NKRVMKHIDRAK+SRIPW+V +GERE++EG+VKLK+V +E
Sbjct: 804 LASEMWGAKLNVEFLVNKRVMKHIDRAKESRIPWIVFLGEREVSEGIVKLKNVETFEEVT 863
Query: 1530 VPRSQIVGELCKRVS 1574
+ RS I+ EL KR++
Sbjct: 864 ISRSTIIDELKKRLT 878
>ref|XP_004138662.1| PREDICTED: histidine--tRNA ligase-like [Cucumis sativus]
Length = 879
Score = 747 bits (1929), Expect = 0.0
Identities = 374/495 (75%), Positives = 429/495 (86%), Gaps = 2/495 (0%)
Frame = +3
Query: 96 GTTAFMQYLQDRLQVTVAG--KIEEWVQQFFSILDPKDPFYVSLLEKVKDIVDSNESRRL 269
GT+ +Q ++D+LQ G +E V+ S LDPK + +LL+K+KDIV+SNESRRL
Sbjct: 384 GTSVVVQSIKDKLQGNGGGLGSLENLVKDLLSFLDPKASGFDNLLKKIKDIVESNESRRL 443
Query: 270 PKLPKGTRDFAKEQMAVREKAFSIISKVFKRHGATALDTPAFEMRETLMGKYGEDSKLIY 449
PKLPKGTRDFAKEQM +R++AFSII VF+RHGAT LDTPAFE+RETL GKYGEDSKLI+
Sbjct: 444 PKLPKGTRDFAKEQMTIRKQAFSIIESVFERHGATTLDTPAFELRETLTGKYGEDSKLIF 503
Query: 450 DLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCDFD 629
DLADQGGEL SLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCD D
Sbjct: 504 DLADQGGELYSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCDLD 563
Query: 630 IAGQFEKMGPDFEIIKILTELLDELKIGDYEVKLNHRKLLDGMLDICGVPPEKFRTICSS 809
IAG +EKMGPDFE+IKILTELLDEL IG+YE+KLNHRKLLDGML+ICGVPPEKFRTICSS
Sbjct: 564 IAGHYEKMGPDFEVIKILTELLDELNIGEYEIKLNHRKLLDGMLEICGVPPEKFRTICSS 623
Query: 810 IDKLDKQPFEQIRKEMVEEKGLNTETADRIGTFVKNRGHPLKLLSELKQEGSDFSRHSES 989
IDKLDKQ F+QI++EMVEEKGL E A+RIG FVK RGHPL LLS+LKQE S ++ S
Sbjct: 624 IDKLDKQSFDQIKREMVEEKGLTVEVAERIGNFVKERGHPLDLLSKLKQEQSALLQNKGS 683
Query: 990 LQALNELEILFKALEKSKCIDKVVFDLSLARGLDYYTGVIYEAVFKGATQVGSIAAGGRY 1169
AL+EL+ILF ALEKSKCIDKVVFDLSLARGLDYYTGVIYEA+FKG TQVGSIAAGGR+
Sbjct: 684 SDALSELDILFSALEKSKCIDKVVFDLSLARGLDYYTGVIYEAIFKGGTQVGSIAAGGRF 743
Query: 1170 DKLIGMFGTKQVPAIGVSLGIERVFTIMEQIQKDQNQTVRATETQVLVSILGDDLSLAAE 1349
D LIGMFG+KQ+PA+G+SLGIERV IMEQI KDQN+ VRAT+T VLVSILGDDL+LAAE
Sbjct: 744 DNLIGMFGSKQIPAVGISLGIERVLVIMEQILKDQNKAVRATKTDVLVSILGDDLTLAAE 803
Query: 1350 LASECWAAGLNTEYLLNKRVMKHIDRAKDSRIPWMVIVGERELNEGVVKLKDVLANKEEE 1529
LASE W A LN E+L+NKRVMKHIDRAK+SRIPW+V +GERE++EG+VKLK+V +E
Sbjct: 804 LASEMWGAKLNVEFLVNKRVMKHIDRAKESRIPWIVFLGEREVSEGIVKLKNVETFEEVT 863
Query: 1530 VPRSQIVGELCKRVS 1574
+ RS I+ EL KR++
Sbjct: 864 ISRSTIIDELKKRLT 878
>ref|XP_002525505.1| histidyl-tRNA synthetase, putative [Ricinus communis]
gi|223535184|gb|EEF36863.1| histidyl-tRNA synthetase,
putative [Ricinus communis]
Length = 886
Score = 739 bits (1907), Expect = 0.0
Identities = 373/496 (75%), Positives = 427/496 (86%), Gaps = 8/496 (1%)
Frame = +3
Query: 96 GTTAFMQYLQDRLQVTVAGK------IEEWVQQFFSILDPKDPFYVSLLEKVKDIVDSNE 257
GT+ +Q ++DRLQ +E+W DPK+P + +++KVK+IV+SNE
Sbjct: 384 GTSVIVQLIKDRLQGKGGDSSDSLQVLEKWAGDLLLYFDPKEPEFDEMVQKVKEIVESNE 443
Query: 258 SRRLPKLPKGTRDFAKEQMAVREKAFSIISKVFKRHGATALDTPAFEMRETLMGKYGEDS 437
SRRLPKLPKGTRDFAKEQMA+RE+AFSII++VFKRHGATALDTPAFE+RETLMGKYGEDS
Sbjct: 444 SRRLPKLPKGTRDFAKEQMAIRERAFSIITEVFKRHGATALDTPAFELRETLMGKYGEDS 503
Query: 438 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQ 617
KLIYDLADQGGELCSLRYDLTVPFARYVAMNG+TSFKRYQIAKVYRRDNPSKGRYREFYQ
Sbjct: 504 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQ 563
Query: 618 CDFDIAGQFEKMGPDFEIIKILTELLDELKIGDYEVKLNHRKLLDGMLDICGVPPEKFRT 797
CDFDIAGQ+E+MGPDFEI+KILTELLDEL IG+Y+VKLNHRKLLDGML+ICGVPPEKFRT
Sbjct: 564 CDFDIAGQYEEMGPDFEIVKILTELLDELNIGEYKVKLNHRKLLDGMLEICGVPPEKFRT 623
Query: 798 ICSSIDKLDKQPFEQIRKEMVEEKGLNTETADRIGTFVKNRGHPLKLLSELKQEGSDFSR 977
ICSS+DKLDKQ F Q++KEMVEEKGL+ ETAD+IGTFVK GHP +LLS+LKQEGS+F
Sbjct: 624 ICSSVDKLDKQSFSQVKKEMVEEKGLSVETADKIGTFVKESGHPKELLSKLKQEGSEFLG 683
Query: 978 HSESLQALNELEILFKALEKSKCIDKVVFDLSLARGLDYYTGVIYEAVFKGATQVGSIAA 1157
++ S +AL+ELEILF ALEKSKCIDKV FDLSLARGLDYYTGVI+EAVFKG TQVGSIAA
Sbjct: 684 NASSRRALDELEILFDALEKSKCIDKVAFDLSLARGLDYYTGVIFEAVFKGKTQVGSIAA 743
Query: 1158 GGRYDKLIGMFGTKQVPAIGVSLGIERVFTIMEQIQKDQNQTVRATETQVLVSILGD--D 1331
GGRYD LIGMFGTKQVPA+GVSLGIERVFTIME+ DQNQT R TETQVL+SILGD
Sbjct: 744 GGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEE---DQNQTSRPTETQVLLSILGDKSK 800
Query: 1332 LSLAAELASECWAAGLNTEYLLNKRVMKHIDRAKDSRIPWMVIVGERELNEGVVKLKDVL 1511
L LAAELA E W A L EY ++ R KHIDRAK+S+IP MV+VG++EL +G+VK+K++
Sbjct: 801 LPLAAELAGELWNAKLKAEYTVSTRFSKHIDRAKESKIPIMVLVGDKELEKGIVKIKNLE 860
Query: 1512 ANKEEEVPRSQIVGEL 1559
E+EVPRS V EL
Sbjct: 861 TTVEKEVPRSNFVEEL 876
>ref|XP_002325939.1| predicted protein [Populus trichocarpa] gi|222862814|gb|EEF00321.1|
predicted protein [Populus trichocarpa]
Length = 533
Score = 726 bits (1873), Expect = 0.0
Identities = 362/501 (72%), Positives = 424/501 (84%), Gaps = 8/501 (1%)
Frame = +3
Query: 96 GTTAFMQYLQDRLQVTVAGK------IEEWVQQFFSILDPKDPFYVSLLEKVKDIVDSNE 257
GT+ +Q ++DRLQ+ G +E+WV+ S PK P + ++KVK+IV+ NE
Sbjct: 32 GTSVIVQLIKDRLQIVGGGSGDSLDILEKWVENLLSFFSPKQPEFDEFVQKVKEIVERNE 91
Query: 258 SRRLPKLPKGTRDFAKEQMAVREKAFSIISKVFKRHGATALDTPAFEMRETLMGKYGEDS 437
SRRLPKLPKGTRDFA EQM +RE+AFSII+ VFKRHGAT+LDTPAFE+RETLMGKYGEDS
Sbjct: 92 SRRLPKLPKGTRDFANEQMVIRERAFSIIADVFKRHGATSLDTPAFELRETLMGKYGEDS 151
Query: 438 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQ 617
KLIYDLADQGGELCSLRYDLTVPFARYVAMNG+TSFKRYQIAKVYRRDNPSKGRYREFYQ
Sbjct: 152 KLIYDLADQGGELCSLRYDLTVPFARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQ 211
Query: 618 CDFDIAGQFEKMGPDFEIIKILTELLDELKIGDYEVKLNHRKLLDGMLDICGVPPEKFRT 797
CDFDIAGQ+E+MGPDFEI+K+LTELLDEL IGDYEVKLNHRKLLDGML+ICGVPPEKF T
Sbjct: 212 CDFDIAGQYEEMGPDFEIVKVLTELLDELDIGDYEVKLNHRKLLDGMLEICGVPPEKFGT 271
Query: 798 ICSSIDKLDKQPFEQIRKEMVEEKGLNTETADRIGTFVKNRGHPLKLLSELKQEGSDFSR 977
ICSSIDKLDKQ FEQ++KEMVEEKGL ETADRIGTFVK + P +LLS+LKQEGS+F +
Sbjct: 272 ICSSIDKLDKQSFEQVKKEMVEEKGLAVETADRIGTFVKEKDSPKELLSKLKQEGSEFLQ 331
Query: 978 HSESLQALNELEILFKALEKSKCIDKVVFDLSLARGLDYYTGVIYEAVFKGATQVGSIAA 1157
++ S +AL+ELEILF ALE+SKCIDKVVFDLSLARGLDYYTGVI+EAVFKG TQVGSIAA
Sbjct: 332 NASSSRALDELEILFDALERSKCIDKVVFDLSLARGLDYYTGVIFEAVFKGTTQVGSIAA 391
Query: 1158 GGRYDKLIGMFGTKQVPAIGVSLGIERVFTIMEQIQKDQNQTVRATETQVLVSILGD--D 1331
GGRYD LIGMFG+K VPA+GVSLGIERVF IMEQ+QKD+N+T R TETQVL+ I+G+
Sbjct: 392 GGRYDNLIGMFGSKPVPAVGVSLGIERVFAIMEQLQKDRNETTRPTETQVLLGIMGNKSK 451
Query: 1332 LSLAAELASECWAAGLNTEYLLNKRVMKHIDRAKDSRIPWMVIVGERELNEGVVKLKDVL 1511
+ LAAEL S+ W+A L E++++ R K I RA DS+IPWMV+V +REL G VK++++
Sbjct: 452 IPLAAELTSKLWSAKLKAEFVVSTRFDKIISRANDSKIPWMVLVRDRELETGKVKIRNLE 511
Query: 1512 ANKEEEVPRSQIVGELCKRVS 1574
EEEVP S V E+ R++
Sbjct: 512 TKIEEEVPLSAFVDEVKNRLN 532