BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010220
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CBI25851.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...   125   3e-27
gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsu...   124   8e-27

>ref|XP_002326464.1| predicted protein [Populus trichocarpa] gi|222833786|gb|EEE72263.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/142 (47%), Positives = 93/142 (65%)
 Frame = +2

Query: 2   IVVGGFVSSTDCYSAFVVSLLRVKQFSEAEKVFRRMLATAVNPDSLASSILIKELCSKGR 181
           IV GG VS  DCYS+ VV L+++K+  EAEK FRR L++ + PDSLA S++I+E+CS+ R
Sbjct: 333 IVAGGSVSIGDCYSSLVVCLIKIKKVEEAEKTFRRALSSGMKPDSLACSMMIREICSEKR 392

Query: 182 ILDGYHLYIEIEKMGCXXXXXXXXXXXXXAGLCQDRHLVEAANIAGVMAERGIMLKPPYV 361
           +LDG+ LY E+EK GC             AGLCQ  H  EAA +A  M E+ I L+ P+V
Sbjct: 393 VLDGFCLYEEVEKTGCLSSIDIDIYSILLAGLCQQGHSAEAARLARSMLEKRIPLRAPHV 452

Query: 362 ENITDHVKNSGKLELVSRITRL 427
           E I +H+KN G  ELV+ +  +
Sbjct: 453 EKIVEHLKNFGGKELVAELVSM 474


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/136 (49%), Positives = 85/136 (62%)
 Frame = +2

Query: 2   IVVGGFVSSTDCYSAFVVSLLRVKQFSEAEKVFRRMLATAVNPDSLASSILIKELCSKGR 181
           +V GG VS  +CYS+ +VSL+  K   EAEK+FRRMLA AV PD LA   LIK LC +GR
Sbjct: 328 VVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGR 387

Query: 182 ILDGYHLYIEIEKMGCXXXXXXXXXXXXXAGLCQDRHLVEAANIAGVMAERGIMLKPPYV 361
           +LDG+HL+ E E M                GL Q RH VEA  +A +M +RGI LK PY 
Sbjct: 388 VLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQLKTPYF 447

Query: 362 ENITDHVKNSGKLELV 409
           ++I +H+K SG  E+V
Sbjct: 448 DSIVEHLKESGDKEIV 463


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/142 (47%), Positives = 86/142 (60%)
 Frame = +2

Query: 2   IVVGGFVSSTDCYSAFVVSLLRVKQFSEAEKVFRRMLATAVNPDSLASSILIKELCSKGR 181
           +V GG VS  +CYS+ +VSL+  K   EAEK+FRRMLA AV PD LA   LIK LC +GR
Sbjct: 334 VVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKPDGLACGTLIKALCLEGR 393

Query: 182 ILDGYHLYIEIEKMGCXXXXXXXXXXXXXAGLCQDRHLVEAANIAGVMAERGIMLKPPYV 361
           +LDG+HL+ E E M                GL Q RH VEA  +A +M +RGI LK PY 
Sbjct: 394 VLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSVEAVKLARLMVDRGIQLKTPYF 453

Query: 362 ENITDHVKNSGKLELVSRITRL 427
           ++I +H+K SG  E+ +    L
Sbjct: 454 DSIVEHLKESGDKEICTHFCTL 475


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/142 (44%), Positives = 89/142 (62%)
 Frame = +2

Query: 2   IVVGGFVSSTDCYSAFVVSLLRVKQFSEAEKVFRRMLATAVNPDSLASSILIKELCSKGR 181
           +V GG VSS DCYS  VV L+R+K+  EAEK+FRR + + V PD LA S++IKELC   R
Sbjct: 331 VVAGGSVSSCDCYSPIVVCLIRIKKVEEAEKLFRRAVVSGVKPDGLACSLMIKELCFVNR 390

Query: 182 ILDGYHLYIEIEKMGCXXXXXXXXXXXXXAGLCQDRHLVEAANIAGVMAERGIMLKPPYV 361
           +LDGY L+ EIEK+G               GLCQ  + +EAA +A  + E+ I LK PYV
Sbjct: 391 VLDGYCLHDEIEKIGSLSTIDSDTYSVLLVGLCQQGYSLEAAKLARSLIEKRIHLKHPYV 450

Query: 362 ENITDHVKNSGKLELVSRITRL 427
           + + +++K  G  +LV+ +  +
Sbjct: 451 DKVVEYMKKFGVTDLVTELASI 472


>gb|ACP39958.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463014|gb|ACP39959.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 288

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/141 (42%), Positives = 91/141 (64%)
 Frame = +2

Query: 5   VVGGFVSSTDCYSAFVVSLLRVKQFSEAEKVFRRMLATAVNPDSLASSILIKELCSKGRI 184
           V G  VS++DCYS+ V++L+R+ + +EAEK+FR+ML +   P  +A S +I+E+C +GR+
Sbjct: 146 VAGRGVSNSDCYSSLVLALIRINRLNEAEKLFRKMLVSGAKPSGIACSTMIREICHEGRV 205

Query: 185 LDGYHLYIEIEKMGCXXXXXXXXXXXXXAGLCQDRHLVEAANIAGVMAERGIMLKPPYVE 364
           LDG+ LY EIE+M                GLC+  H VEA  +A +M  R I L+ PYV+
Sbjct: 206 LDGFCLYNEIERMQYISSIDTDIYSILLVGLCRQSHSVEAVKLARLMLRRRIRLEAPYVD 265

Query: 365 NITDHVKNSGKLELVSRITRL 427
            I  H+KNS   ELV++++R+
Sbjct: 266 EIIKHLKNSTDKELVTQLSRI 286