BLASTX nr result
ID: Bupleurum21_contig00010218
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00010218
(1270 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 153 1e-34
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 145 2e-32
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 145 2e-32
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2... 138 3e-30
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 134 6e-29
>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 532
Score = 153 bits (386), Expect = 1e-34
Identities = 123/345 (35%), Positives = 183/345 (53%), Gaps = 16/345 (4%)
Frame = +1
Query: 250 DRISNLPINVKHLILERLPMHDAARTSILSKTWRSVWELLAELVFDDVFFSYIVSKKAKQ 429
DRIS LP +V IL LP+ +A +TS+LS WR+ W L +VFD S I + K
Sbjct: 56 DRISCLPGHVIDQILSYLPIREAVKTSVLSSEWRNKWHTLPNIVFDLNCVSNIEAIKDPS 115
Query: 430 AQASEVSTTISNILLVHSGPLLKFHLSIPR-DLPLLHT----DMWIKNISNRGVK--LLK 588
S++ + ++LL+HSGP+ KF LS P DL +++ D WI ++ + +K +L+
Sbjct: 116 IFMSKLLRIVDHVLLLHSGPINKFQLSDPGCDLSDVNSVADIDRWILRLTEKSIKEFVLQ 175
Query: 589 IFNYPQTAYRMPSYFFSCTELTHLMLDNCILNPPLGFEGFCNLISVKLLDVTITA----- 753
IF + Y++P FSC L +L LD C + PP F+GF NL S++L VT+
Sbjct: 176 IF-VAKKYYKIPQCLFSCQSLQNLKLDCCCIQPPTTFKGFKNLKSLELYQVTMAQDAFEN 234
Query: 754 VMSFGTQLETLDLKYCIGIKYLGGQFKCNNNIRELMITDCKKINWRWFKCTRKVETLGLM 933
++S LE L L Y G+ L N + L++ D + F T ++ LGL
Sbjct: 235 LISGCHLLEDLKLLYLEGLTQL--NIHAPNLKKFLIVGDFVDFS---FDNTFQLTELGLF 289
Query: 934 -FEERSNSRQK---IVNMDKVVGNMPKIQVLLLDGLFLKYLEPGASGLKRLTTTMENLVC 1101
F+ RSN Q N+ + ++P I+ L++ FLKYL+ G +K L T NL
Sbjct: 290 SFDSRSNHSQLRGCSSNLLRFFAHLPHIESLVISSQFLKYLDAGDVPVK-LPTPCINLSS 348
Query: 1102 LQLFHVKFHDLGQIQSFFCLIRSLPNLQNLRIRLEPKVKSVDSLT 1236
L ++F+DL QI + CL+RS PNL+ L I + + K D LT
Sbjct: 349 L-FICIRFNDLKQILAALCLLRSSPNLRRLEIAAKLE-KHTDLLT 391
>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 428
Score = 145 bits (366), Expect = 2e-32
Identities = 118/334 (35%), Positives = 170/334 (50%), Gaps = 13/334 (3%)
Frame = +1
Query: 250 DRISNLPINVKHLILERLPMHDAARTSILSKTWRSVWELLAELVFDDVFFSYIVSKKAKQ 429
DRIS+LP ++ IL LP+ +A RTSILS WR W L LVFD S +S ++
Sbjct: 17 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFD----SQCISDTSED 72
Query: 430 AQA--SEVSTTISNILLVHSGPLLKFHLSIPRDLPLLHTDMWIKNISNRGVKLLKIFNYP 603
S++S I ++LL+HSGP+ KF LS + + D W +++ R VK + +
Sbjct: 73 LLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWK 132
Query: 604 QTAYRMPSYFFSCTELTHLMLDNCILNPPLGFEGFCNLISVKLLDVTITA-----VMSFG 768
Y++PS FSC L HL L NC L PP F+GF NL S+ L VT++ ++S
Sbjct: 133 GQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTC 192
Query: 769 TQLETLDLKYCIGIKYLGGQFKCNNNIRELMITDC-KKINWRWFKCTRK--VETLGLMFE 939
LE L L G YL N + L D K FK T + V ++GL
Sbjct: 193 PLLERLTLMNFDGFNYL------NIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVN 246
Query: 940 ERSNSRQ---KIVNMDKVVGNMPKIQVLLLDGLFLKYLEPGASGLKRLTTTMENLVCLQL 1110
S+ + + N+ + + ++P+IQ L + FLKYL GA +K L T +L L +
Sbjct: 247 FESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVK-LPTPCIDLSYLSI 305
Query: 1111 FHVKFHDLGQIQSFFCLIRSLPNLQNLRIRLEPK 1212
+ F+D +I + CL RS PNL+ L I P+
Sbjct: 306 -RINFYDSKEISAALCLFRSSPNLRELEILARPE 338
>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 660
Score = 145 bits (366), Expect = 2e-32
Identities = 118/334 (35%), Positives = 170/334 (50%), Gaps = 13/334 (3%)
Frame = +1
Query: 250 DRISNLPINVKHLILERLPMHDAARTSILSKTWRSVWELLAELVFDDVFFSYIVSKKAKQ 429
DRIS+LP ++ IL LP+ +A RTSILS WR W L LVFD S +S ++
Sbjct: 249 DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFD----SQCISDTSED 304
Query: 430 AQA--SEVSTTISNILLVHSGPLLKFHLSIPRDLPLLHTDMWIKNISNRGVKLLKIFNYP 603
S++S I ++LL+HSGP+ KF LS + + D W +++ R VK + +
Sbjct: 305 LLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWK 364
Query: 604 QTAYRMPSYFFSCTELTHLMLDNCILNPPLGFEGFCNLISVKLLDVTITA-----VMSFG 768
Y++PS FSC L HL L NC L PP F+GF NL S+ L VT++ ++S
Sbjct: 365 GQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTC 424
Query: 769 TQLETLDLKYCIGIKYLGGQFKCNNNIRELMITDC-KKINWRWFKCTRK--VETLGLMFE 939
LE L L G YL N + L D K FK T + V ++GL
Sbjct: 425 PLLERLTLMNFDGFNYL------NIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVN 478
Query: 940 ERSNSRQ---KIVNMDKVVGNMPKIQVLLLDGLFLKYLEPGASGLKRLTTTMENLVCLQL 1110
S+ + + N+ + + ++P+IQ L + FLKYL GA +K L T +L L +
Sbjct: 479 FESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVK-LPTPCIDLSYLSI 537
Query: 1111 FHVKFHDLGQIQSFFCLIRSLPNLQNLRIRLEPK 1212
+ F+D +I + CL RS PNL+ L I P+
Sbjct: 538 -RINFYDSKEISAALCLFRSSPNLRELEILARPE 570
>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
predicted protein [Populus trichocarpa]
Length = 505
Score = 138 bits (347), Expect = 3e-30
Identities = 115/376 (30%), Positives = 184/376 (48%), Gaps = 14/376 (3%)
Frame = +1
Query: 139 NSRSLNYHCKNTVSLSISGNM-ASHAIAIQLDCGALT-LDRISNLPINVKHLILERLPMH 312
NS+ + T+S ++SG + + + C T LDRIS+LP +V IL LP+
Sbjct: 56 NSKDIGVSVNETLSSTMSGEIYKTQREPPKFPCEIDTELDRISSLPGHVLGQILSLLPIR 115
Query: 313 DAARTSILSKTWRSVWELLAELVFDDVFFSYIVSKKAKQAQASEVSTTISNILLVHSGPL 492
DA RTS L + WR W + +VFD S +S + + +++ I +ILL+H+GP+
Sbjct: 116 DAVRTSALKRKWRYKWSQIPHIVFDSQGIS--ISSQDQTTIKNKLVNIIDHILLLHNGPI 173
Query: 493 LKFHLSIPRDLPLLHTDMWIKNISNRGVKLLKIFNYPQTAYRMPSYFFSCTELTHLMLDN 672
KF LS L + D WI ++S K + + Y++PS FS L +L L N
Sbjct: 174 YKFKLSHCDLLAVSDIDRWILHLSRGSTKEFVLEIWKGQQYKLPSCLFSFKNLVYLELFN 233
Query: 673 CILNPPLGFEGFCNLISVKLLDVTIT-----AVMSFGTQLETLDLKYCIGIKYLGGQFKC 837
C+L PPL F+GF NL ++ L VT+ ++S LE L L G +L
Sbjct: 234 CLLKPPLAFKGFRNLKNLDLQHVTLAQEVFEKLISSCAMLERLTLINFDGFTHL------ 287
Query: 838 NNNIRELMITDCKKI-NWRWFKCT--RKVETLGLMFEERSNSRQKIVNMDKVVG---NMP 999
N N L D + + F+ T + ++GL +++ + K++ N+P
Sbjct: 288 NINAPNLQFFDVGGVFDDVSFENTFVLALVSIGLYVNVKNDQNVSYGSSSKLLRFFVNLP 347
Query: 1000 KIQVLLLDGLFLKYLEPGASGLKRLTTTME-NLVCLQLFHVKFHDLGQIQSFFCLIRSLP 1176
++ L + FLKYL G K ++ N + ++L F+D + + FCL+RS P
Sbjct: 348 HVRRLEIQSYFLKYLAIGKVPSKLPKPCIDLNYLSIRL---NFNDYEENSAAFCLLRSCP 404
Query: 1177 NLQNLRIRLEPKVKSV 1224
NLQ + I P+ ++V
Sbjct: 405 NLQEIEILARPEEQAV 420
>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
Length = 427
Score = 134 bits (336), Expect = 6e-29
Identities = 108/331 (32%), Positives = 162/331 (48%), Gaps = 6/331 (1%)
Frame = +1
Query: 250 DRISNLPINVKHLILERLPMHDAARTSILSKTWRSVWELLAELVFDDVFFSYIVSKKAKQ 429
DRIS LP +V +L L + +A RTS+LS WR W L LVFD S V+ +
Sbjct: 17 DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVS--VASQDHM 74
Query: 430 AQASEVSTTISNILLVHSGPLLKFHLSIPRDLPLLHTDMWIKNISNRGVKLLKIFNYPQT 609
+++ I ++LL+HSGP+ KF LS + + D W ++ + +K + +
Sbjct: 75 IIKNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQ 134
Query: 610 AYRMPSYFFSCTELTHLMLDNCILNPPLGFEGFCNLISVKLLDVTITAVMSFGTQLETLD 789
Y++ S FSC LTHL L NC L PP F+GF NL S+ L VT+ A F + +
Sbjct: 135 RYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTL-AQDVFENLISSCP 193
Query: 790 LKYCIGIKYLGGQFKCNNNIRELMITDC-KKINWRWFKCTRK--VETLGLMFE---ERSN 951
L + + G N + L+ D K F+ T + V ++GL +S
Sbjct: 194 LLERLTLMNFDGFTNLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSIGLYLNFEINQSR 253
Query: 952 SRQKIVNMDKVVGNMPKIQVLLLDGLFLKYLEPGASGLKRLTTTMENLVCLQLFHVKFHD 1131
N+ K ++P +Q L + FLKYL G +K L +L L + + F+D
Sbjct: 254 LHGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIK-LPRPCIDLSYLSI-RINFND 311
Query: 1132 LGQIQSFFCLIRSLPNLQNLRIRLEPKVKSV 1224
L +I + CL+RS PNLQ L I P+ ++V
Sbjct: 312 LKEISASLCLLRSSPNLQELEILARPEEQTV 342