BLASTX nr result

ID: Bupleurum21_contig00010216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010216
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]   249   7e-64
ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spi...   248   1e-63
emb|CBI23512.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002869861.1| hypothetical protein ARALYDRAFT_492692 [Arab...   226   5e-57
ref|NP_193913.4| binding / calmodulin binding protein [Arabidops...   220   4e-55

>emb|CAN71702.1| hypothetical protein VITISV_038718 [Vitis vinifera]
          Length = 1251

 Score =  249 bits (635), Expect = 7e-64
 Identities = 144/254 (56%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
 Frame = -3

Query: 745 EKNKHHFSSPLTN----RTASIFTDISNFKTPKSNVSTKPINSPYPQQFFTASKQTPKSS 578
           E+++    SP  N     ++S   DISNFKTPK +      +SP+PQ FFTASKQTP+SS
Sbjct: 3   EESRRPCPSPSPNVCCSSSSSFLKDISNFKTPKQSSKNPSFHSPFPQ-FFTASKQTPRSS 61

Query: 577 STAVRRRRPSLAPPSHSKVAAARRLKAFELEQSKSARKAQIAKENSLKSLASSLTAWLNF 398
           ++A R R PSLAP S SK  AARRLKAFE+EQS+S+RKAQI KE SLKSLA SLT WLNF
Sbjct: 62  ASAFRHR-PSLAPSS-SKSKAARRLKAFEMEQSQSSRKAQIKKEKSLKSLAKSLTVWLNF 119

Query: 397 LFENPRSCECENSNLSVQNFGACEVVVSRNGKRNSVDDGEVAHNSMWRGSKRQRDSMWCN 218
           LFENP SC C+ S L   +       V  NGKR+S   G V  N  WR  KRQRDSMW  
Sbjct: 120 LFENPESCGCDVSRLVGVDQSRS---VLANGKRDSWPGGGVGINGAWRSPKRQRDSMWQG 176

Query: 217 T--DDKETILLTNPKFSELSNSLCEICSFDDLKERMGLYLSLGSCKEIFDVMAQVTKNID 44
               D +  +  +  FS L  SL E+CSFDDLK+RM +YLSLG+CKEIF VM QV KNID
Sbjct: 177 DGGGDSDAGMFPSLMFSSLQLSLKEVCSFDDLKQRMRVYLSLGTCKEIFKVMTQVAKNID 236

Query: 43  SGRIRMKSNCSIVT 2
            GR++MK++C IVT
Sbjct: 237 EGRLKMKAHCPIVT 250


>ref|XP_003635461.1| PREDICTED: LOW QUALITY PROTEIN: abnormal spindle-like
           microcephaly-associated protein homolog, partial [Vitis
           vinifera]
          Length = 1022

 Score =  248 bits (633), Expect = 1e-63
 Identities = 144/254 (56%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
 Frame = -3

Query: 745 EKNKHHFSSPLTN----RTASIFTDISNFKTPKSNVSTKPINSPYPQQFFTASKQTPKSS 578
           E+++    SP  N     ++S   DISNFKTPK +      +SP+PQ FFTASKQTP+SS
Sbjct: 3   EESRRPCPSPSPNVCCSSSSSFLKDISNFKTPKQSSKNPSFHSPFPQ-FFTASKQTPRSS 61

Query: 577 STAVRRRRPSLAPPSHSKVAAARRLKAFELEQSKSARKAQIAKENSLKSLASSLTAWLNF 398
           ++A R R PSLAP S SK  AARRLKAFE+EQS+S+RKAQI KE SLKSLA SLT WLNF
Sbjct: 62  ASAFRHR-PSLAPSS-SKSKAARRLKAFEMEQSQSSRKAQIKKEKSLKSLAKSLTVWLNF 119

Query: 397 LFENPRSCECENSNLSVQNFGACEVVVSRNGKRNSVDDGEVAHNSMWRGSKRQRDSMWCN 218
           LFENP SC C+ S L   +       V  NGKR+S   G V  N  WR  KRQRDSMW  
Sbjct: 120 LFENPESCGCDVSRLVGVDQSRS---VLANGKRDSWPGGGVGINGAWRSPKRQRDSMWQG 176

Query: 217 T--DDKETILLTNPKFSELSNSLCEICSFDDLKERMGLYLSLGSCKEIFDVMAQVTKNID 44
               D +  +  +  FS L  SL E+CSFDDLK+RM +YLSLG+CKEIF VM QV KNID
Sbjct: 177 DGGGDSDAGMFPSLIFSSLQLSLKEVCSFDDLKQRMRVYLSLGTCKEIFKVMTQVAKNID 236

Query: 43  SGRIRMKSNCSIVT 2
            GR++MK++C IVT
Sbjct: 237 EGRLKMKAHCPIVT 250


>emb|CBI23512.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  248 bits (633), Expect = 1e-63
 Identities = 144/254 (56%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
 Frame = -3

Query: 745 EKNKHHFSSPLTN----RTASIFTDISNFKTPKSNVSTKPINSPYPQQFFTASKQTPKSS 578
           E+++    SP  N     ++S   DISNFKTPK +      +SP+PQ FFTASKQTP+SS
Sbjct: 3   EESRRPCPSPSPNVCCSSSSSFLKDISNFKTPKQSSKNPSFHSPFPQ-FFTASKQTPRSS 61

Query: 577 STAVRRRRPSLAPPSHSKVAAARRLKAFELEQSKSARKAQIAKENSLKSLASSLTAWLNF 398
           ++A R R PSLAP S SK  AARRLKAFE+EQS+S+RKAQI KE SLKSLA SLT WLNF
Sbjct: 62  ASAFRHR-PSLAPSS-SKSKAARRLKAFEMEQSQSSRKAQIKKEKSLKSLAKSLTVWLNF 119

Query: 397 LFENPRSCECENSNLSVQNFGACEVVVSRNGKRNSVDDGEVAHNSMWRGSKRQRDSMWCN 218
           LFENP SC C+ S L   +       V  NGKR+S   G V  N  WR  KRQRDSMW  
Sbjct: 120 LFENPESCGCDVSRLVGVDQSRS---VLANGKRDSWPGGGVGINGAWRSPKRQRDSMWQG 176

Query: 217 T--DDKETILLTNPKFSELSNSLCEICSFDDLKERMGLYLSLGSCKEIFDVMAQVTKNID 44
               D +  +  +  FS L  SL E+CSFDDLK+RM +YLSLG+CKEIF VM QV KNID
Sbjct: 177 DGGGDSDAGMFPSLIFSSLQLSLKEVCSFDDLKQRMRVYLSLGTCKEIFKVMTQVAKNID 236

Query: 43  SGRIRMKSNCSIVT 2
            GR++MK++C IVT
Sbjct: 237 EGRLKMKAHCPIVT 250


>ref|XP_002869861.1| hypothetical protein ARALYDRAFT_492692 [Arabidopsis lyrata subsp.
           lyrata] gi|297315697|gb|EFH46120.1| hypothetical protein
           ARALYDRAFT_492692 [Arabidopsis lyrata subsp. lyrata]
          Length = 1198

 Score =  226 bits (576), Expect = 5e-57
 Identities = 138/256 (53%), Positives = 169/256 (66%), Gaps = 16/256 (6%)
 Frame = -3

Query: 721 SPLTNRTASIFTDISNFKTPK--SNVSTKPINSPYPQQFFTASKQTPKSSSTAVRRRRPS 548
           +P  N T+S+ +DISNFKTP+  S V++    SPYP  FFTASKQTPKSSS+  RR  PS
Sbjct: 12  APPRNLTSSLLSDISNFKTPRRSSVVNSNFSKSPYPH-FFTASKQTPKSSSSNFRR--PS 68

Query: 547 LAPP--SHSKVA-AARRLKAFELEQSKSARKAQIAKENSLKSLASSLTAWLNFLFENPRS 377
           + P   S SKV+ ++RRLKAFEL+QS+S+RKA++ KE SL+SLA SLT WLNFLFENP +
Sbjct: 69  MVPSYTSRSKVSTSSRRLKAFELQQSQSSRKAELTKEKSLRSLAKSLTVWLNFLFENPVN 128

Query: 376 CECE--NSNLSVQNFGACEVVVSRNGKRNSVDDGEVAHNS-------MWRGSKRQRDSMW 224
           C C+   ++  V N G         GKR   D GE   NS       MWR  KR R+  W
Sbjct: 129 CGCDPFENDSGVGNLG--------KGKR---DSGEALGNSKSVGVDTMWRSPKRLRNLGW 177

Query: 223 CNTDDKETI--LLTNPKFSELSNSLCEICSFDDLKERMGLYLSLGSCKEIFDVMAQVTKN 50
           C       I   LT  K+S L  SL ++CS DDLK+RM  +LSLGSCKEIFDVM +VTKN
Sbjct: 178 CGEKKGSEIGSSLTGSKYSTLRESLRDVCSLDDLKQRMQFHLSLGSCKEIFDVMTRVTKN 237

Query: 49  IDSGRIRMKSNCSIVT 2
           ID GRI+MKS C +VT
Sbjct: 238 IDEGRIKMKSQCPLVT 253


>ref|NP_193913.4| binding / calmodulin binding protein [Arabidopsis thaliana]
           gi|332659107|gb|AEE84507.1| binding / calmodulin binding
           protein [Arabidopsis thaliana]
          Length = 1255

 Score =  220 bits (560), Expect = 4e-55
 Identities = 131/254 (51%), Positives = 164/254 (64%), Gaps = 14/254 (5%)
 Frame = -3

Query: 721 SPLTNRTASIFTDISNFKTPK--SNVSTKPINSPYPQQFFTASKQTPKSSSTAVRRRRPS 548
           +P  N  +S+ +DISNFKTP+  S V++    SPYP  FFTASKQTPKSSS+  RR    
Sbjct: 12  APPRNPASSLLSDISNFKTPRRTSVVNSNISKSPYPH-FFTASKQTPKSSSSNFRRPSMV 70

Query: 547 LAPPSHSKVA-AARRLKAFELEQSKSARKAQIAKENSLKSLASSLTAWLNFLFENPRSCE 371
            +  S SKV+ ++RRLKAFEL+QS+S+RKA++ KE +L+SLA SLT WLNFLFENP +C 
Sbjct: 71  HSYASRSKVSTSSRRLKAFELQQSQSSRKAELTKEKNLRSLAKSLTVWLNFLFENPENCG 130

Query: 370 CE--NSNLSVQNFGACEVVVSRNGKRNSVDDGEVAHNS-------MWRGSKRQRDSMWCN 218
           C+   +   V N G         GKR   D GE   NS       MWR  KR R+  WC 
Sbjct: 131 CDPFENESGVGNLG--------KGKR---DSGEALGNSKSVGVDTMWRSPKRLRNLGWCG 179

Query: 217 TDDKETI--LLTNPKFSELSNSLCEICSFDDLKERMGLYLSLGSCKEIFDVMAQVTKNID 44
              +  I   LT  K+S L  SL ++CS DDLK+RM  +LSLGSCKEIFDVM +V+KNID
Sbjct: 180 EKKRSEIDSSLTGSKYSTLRESLRDVCSLDDLKQRMQFHLSLGSCKEIFDVMTRVSKNID 239

Query: 43  SGRIRMKSNCSIVT 2
            GRI+MK  C +VT
Sbjct: 240 EGRIKMKPQCPLVT 253


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