BLASTX nr result

ID: Bupleurum21_contig00010210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010210
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143525.1| PREDICTED: uncharacterized protein LOC101223...   131   1e-31
ref|XP_002521546.1| conserved hypothetical protein [Ricinus comm...   138   2e-30
ref|XP_002327684.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-28
ref|XP_003537603.1| PREDICTED: uncharacterized protein LOC100784...   130   7e-28
emb|CBI17482.3| unnamed protein product [Vitis vinifera]              129   1e-27

>ref|XP_004143525.1| PREDICTED: uncharacterized protein LOC101223122 [Cucumis sativus]
           gi|449521447|ref|XP_004167741.1| PREDICTED:
           uncharacterized LOC101223122 [Cucumis sativus]
          Length = 295

 Score =  131 bits (329), Expect(2) = 1e-31
 Identities = 62/118 (52%), Positives = 84/118 (71%)
 Frame = -3

Query: 574 SSVILSRHDSKALWIALGANLNGGLSIILKKTIKQERPLSTSKSDFGMPSTHAQSIFFNV 395
           + +IL RHD++ALW A+G+ +N  LSI+LK+ + QERP++T +SD GMPS+HAQSIFF V
Sbjct: 130 AGIILLRHDAEALWTAMGSVINAVLSIVLKRILNQERPIATLRSDPGMPSSHAQSIFFTV 189

Query: 394 FMANLSIIELLGMNVYTATIVGILLAFGSYFSQLRVSQHYHTVDQVMTGATLGSIFSV 221
               LS +E LG+N  + +I G    FGSYFS LRVSQ  HT+ QV+ G+ LG  F +
Sbjct: 190 LFVALSAVEWLGVNAVSLSICGFSFIFGSYFSWLRVSQKLHTISQVLVGSVLGGFFGI 247



 Score = 32.7 bits (73), Expect(2) = 1e-31
 Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
 Frame = -1

Query: 792 LKSCKHSKTPTFNLTF----VSKNLKFSNKWGRMPNKIIMTP---RKSVWNEGITTLKQ- 637
           LK       P+ NL F    +SK   F N+ GR   ++  T    R     EG  +L+  
Sbjct: 37  LKPTSSLHFPSSNLVFLRGFISKEALFRNR-GRGMAELTRTSSSVRCGNGEEGFRSLETE 95

Query: 636 --CDGSFKFHPHTSAAGLESTLNHLSSY 559
              DGS +F P  +A GLE+ LN LS +
Sbjct: 96  SFFDGSSEFRPVNAAGGLEAILNKLSKW 123


>ref|XP_002521546.1| conserved hypothetical protein [Ricinus communis]
           gi|223539224|gb|EEF40817.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score =  138 bits (348), Expect = 2e-30
 Identities = 74/144 (51%), Positives = 94/144 (65%)
 Frame = -3

Query: 655 DHNSQTM*WIFQVSPSHFSCWTRIHSQSSVILSRHDSKALWIALGANLNGGLSIILKKTI 476
           D  SQ M   F+   +  S W        V+L RHD++ALWIA+G+ LN  LS+ LK+  
Sbjct: 87  DFRSQLMARGFEPLLNRLSKWLVAALFGVVLLWRHDAEALWIAMGSVLNAILSVTLKRVF 146

Query: 475 KQERPLSTSKSDFGMPSTHAQSIFFNVFMANLSIIELLGMNVYTATIVGILLAFGSYFSQ 296
            QERP +T+KSD GMPS+HAQ IF+ V   +LS+ E LG+N +T  I G+ LA GSYFS 
Sbjct: 147 NQERPFATAKSDPGMPSSHAQCIFYTVVFCSLSVTEWLGVNEFTLLISGLNLALGSYFSW 206

Query: 295 LRVSQHYHTVDQVMTGATLGSIFS 224
           LRVSQ YHT  QV+ GA  GS+FS
Sbjct: 207 LRVSQQYHTASQVVVGAAAGSLFS 230


>ref|XP_002327684.1| predicted protein [Populus trichocarpa] gi|222836769|gb|EEE75162.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  132 bits (332), Expect = 2e-28
 Identities = 67/127 (52%), Positives = 89/127 (70%)
 Frame = -3

Query: 601 SCWTRIHSQSSVILSRHDSKALWIALGANLNGGLSIILKKTIKQERPLSTSKSDFGMPST 422
           S W  +    +VIL RHD+KA+W ALG  +N  LS+ILK+T  QERP ST +SD GMPS+
Sbjct: 1   SKWLVVTFFGAVILGRHDAKAMWAALGLVVNSILSVILKRTFNQERPDSTLRSDPGMPSS 60

Query: 421 HAQSIFFNVFMANLSIIELLGMNVYTATIVGILLAFGSYFSQLRVSQHYHTVDQVMTGAT 242
           H QSIFF +  A LS+ E LG+N +T  +   +LAFG+Y + LRVSQ  HT++Q + GA 
Sbjct: 61  HGQSIFFTLVFAILSVGEWLGVNEFTLILSAFMLAFGTYLTWLRVSQGLHTINQAVVGAA 120

Query: 241 LGSIFSV 221
           +GSIFS+
Sbjct: 121 VGSIFSI 127


>ref|XP_003537603.1| PREDICTED: uncharacterized protein LOC100784545 [Glycine max]
          Length = 287

 Score =  130 bits (327), Expect = 7e-28
 Identities = 68/115 (59%), Positives = 84/115 (73%)
 Frame = -3

Query: 565 ILSRHDSKALWIALGANLNGGLSIILKKTIKQERPLSTSKSDFGMPSTHAQSIFFNVFMA 386
           IL RHD++ALW   G+ LN  LS++LK+ + QERP ST KSD GMPS+HAQSIFF VF  
Sbjct: 127 ILWRHDAEALWFTAGSVLNAMLSVLLKRILNQERP-STLKSDPGMPSSHAQSIFFTVFFV 185

Query: 385 NLSIIELLGMNVYTATIVGILLAFGSYFSQLRVSQHYHTVDQVMTGATLGSIFSV 221
            LS +E LG+N +T  I   +L FGS+FS LRVSQ  HTV QV+ GA +GSIFS+
Sbjct: 186 ILSGVEWLGLNGFTIAISASVLTFGSFFSYLRVSQQLHTVSQVVVGAAIGSIFSI 240


>emb|CBI17482.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  129 bits (325), Expect = 1e-27
 Identities = 65/123 (52%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
 Frame = -3

Query: 568 VILSRHDSKALWIALGANLNGGLSIILKKTIKQERPLSTSKSDFGMPSTHAQSIFFNVFM 389
           VIL RHD+++LW A+G+ LN  LS+ LK+ + QERP+S  +S  GMPS+HAQSIFF V  
Sbjct: 62  VILWRHDAESLWAAMGSVLNTVLSVTLKQILNQERPVSALRSGPGMPSSHAQSIFFTVVF 121

Query: 388 ANLSIIELLGMNVYTATIVGILLAFGSYFSQLRVSQHYHTVDQVMTGATLGSIFSVQSI- 212
             LS++E LG+N  T TI G+ LA GSY S LRVSQ +HT+ QV+ G+ +GS+F +  + 
Sbjct: 122 TILSVVEWLGINGLTLTISGLALALGSYLSWLRVSQQFHTISQVLVGSAVGSVFCILWLW 181

Query: 211 SWQ 203
           SW+
Sbjct: 182 SWE 184


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