BLASTX nr result

ID: Bupleurum21_contig00010198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010198
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36159.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002279835.1| PREDICTED: uncharacterized protein LOC100244...   125   4e-27
ref|XP_002303280.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002281208.1| PREDICTED: uncharacterized protein LOC100245...   124   1e-26
ref|XP_002528196.1| transcription factor, putative [Ricinus comm...   119   3e-25

>emb|CBI36159.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/124 (52%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 SLVSQYEFAPRVN------PNLPKPNVRGLASSAEWSENESFVLLEVWGDRFLRLGRKSL 195
           SL+S YEFAPRV          PKP+  G  S  +W+E+E+FVLL+ WGDRFL+LGRKSL
Sbjct: 97  SLISSYEFAPRVAVPSAVAAPAPKPSFGGRNSLTDWTEHETFVLLDAWGDRFLKLGRKSL 156

Query: 194 RSDDWIEVAEKVSDLCKAERSHVQCRNQLDTLXXXXXXXXXXXXXXXXYYGKWVFFKKMD 15
           RS++W EVAEKVS   + ER+  QCRN+LDTL                   KWV+FKKMD
Sbjct: 157 RSEEWQEVAEKVSRESRTERTDTQCRNRLDTLKKKYKKENMKSGETGGGTNKWVYFKKMD 216

Query: 14  MLLS 3
           ML+S
Sbjct: 217 MLMS 220


>ref|XP_002279835.1| PREDICTED: uncharacterized protein LOC100244623 [Vitis vinifera]
          Length = 401

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/124 (52%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 SLVSQYEFAPRVN------PNLPKPNVRGLASSAEWSENESFVLLEVWGDRFLRLGRKSL 195
           SL+S YEFAPRV          PKP+  G  S  +W+E+E+FVLL+ WGDRFL+LGRKSL
Sbjct: 132 SLISSYEFAPRVAVPSAVAAPAPKPSFGGRNSLTDWTEHETFVLLDAWGDRFLKLGRKSL 191

Query: 194 RSDDWIEVAEKVSDLCKAERSHVQCRNQLDTLXXXXXXXXXXXXXXXXYYGKWVFFKKMD 15
           RS++W EVAEKVS   + ER+  QCRN+LDTL                   KWV+FKKMD
Sbjct: 192 RSEEWQEVAEKVSRESRTERTDTQCRNRLDTLKKKYKKENMKSGETGGGTNKWVYFKKMD 251

Query: 14  MLLS 3
           ML+S
Sbjct: 252 MLMS 255


>ref|XP_002303280.1| predicted protein [Populus trichocarpa] gi|222840712|gb|EEE78259.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/124 (51%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 SLVSQYEFAPRVN------PNLPKPNVRGLASSAEWSENESFVLLEVWGDRFLRLGRKSL 195
           SLVS YEFAPRV       P  PKP+V G     +W+E E+FVLL+ WGD+FL+ G+KSL
Sbjct: 146 SLVSSYEFAPRVPAPHVAVPAGPKPSVGGRNPLTDWTERETFVLLDAWGDKFLQRGKKSL 205

Query: 194 RSDDWIEVAEKVSDLCKAERSHVQCRNQLDTLXXXXXXXXXXXXXXXXYYGKWVFFKKMD 15
           RSD+W EVAEKVS+  K ER+  QCRN+LDTL                   KWV+FKK+D
Sbjct: 206 RSDEWQEVAEKVSEKSKIERTDTQCRNRLDTLKKKYKVEKIKLAEAGGGASKWVYFKKLD 265

Query: 14  MLLS 3
           +L+S
Sbjct: 266 ILMS 269


>ref|XP_002281208.1| PREDICTED: uncharacterized protein LOC100245606 isoform 1 [Vitis
           vinifera] gi|359484599|ref|XP_003633126.1| PREDICTED:
           uncharacterized protein LOC100245606 isoform 2 [Vitis
           vinifera] gi|359484601|ref|XP_003633127.1| PREDICTED:
           uncharacterized protein LOC100245606 isoform 3 [Vitis
           vinifera] gi|359484603|ref|XP_003633128.1| PREDICTED:
           uncharacterized protein LOC100245606 isoform 4 [Vitis
           vinifera] gi|147803403|emb|CAN71046.1| hypothetical
           protein VITISV_022008 [Vitis vinifera]
          Length = 366

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
 Frame = -2

Query: 353 LVSQYEFAPRVNPNLPKPNVR----GLASSAEWSENESFVLLEVWGDRFLRLGRKSLRSD 186
           LV+ YEFAPRV   +P P  R    G  SSAEW+E+E+F+LLE WG+RF++LGRKSLRSD
Sbjct: 102 LVNNYEFAPRV---VPPPTSRLPFGGRNSSAEWTEHETFLLLEAWGERFVQLGRKSLRSD 158

Query: 185 DWIEVAEKVSDLCKAERSHVQCRNQLDTLXXXXXXXXXXXXXXXXYYGKWVFFKKMDMLL 6
           DW +VAEKVS+  K ER+ +QCRN+LDTL                   KWVF+KKMD L+
Sbjct: 159 DWADVAEKVSEGSKIERTDMQCRNRLDTLKKKYKKERAKVEEMGGGNSKWVFYKKMDALM 218


>ref|XP_002528196.1| transcription factor, putative [Ricinus communis]
           gi|223532408|gb|EEF34203.1| transcription factor,
           putative [Ricinus communis]
          Length = 401

 Score =  119 bits (297), Expect = 3e-25
 Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
 Frame = -2

Query: 356 SLVSQYEFAPRVN------PNLPKPNVRGLASSAEWSENESFVLLEVWGDRFLRLGRKSL 195
           SLVS YEFAPRV       P+  KP+  G     +W+E+E+FVLL+ WGD+FL+ GRKSL
Sbjct: 134 SLVSSYEFAPRVPAPPAVAPSASKPSFAGRNPLTDWTEHETFVLLDAWGDKFLQRGRKSL 193

Query: 194 RSDDWIEVAEKVSDLCKAERSHVQCRNQLDTLXXXXXXXXXXXXXXXXYYGKWVFFKKMD 15
           RS++W EVAEKVS+  K ER+  QCRN+LDTL                   KWV+FKKMD
Sbjct: 194 RSEEWQEVAEKVSEESKIERTDTQCRNRLDTLKKKYKKEKINLSETGIT-SKWVYFKKMD 252

Query: 14  MLLS 3
           +L+S
Sbjct: 253 LLMS 256


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