BLASTX nr result

ID: Bupleurum21_contig00010189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010189
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40981.1| unknown [Medicago truncatula]                          200   1e-49
emb|CBI34744.3| unnamed protein product [Vitis vinifera]              200   1e-49
ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...   200   1e-49
ref|XP_002298062.1| f-box family protein [Populus trichocarpa] g...   199   3e-49
ref|XP_002304470.1| f-box family protein [Populus trichocarpa] g...   199   3e-49

>gb|AFK40981.1| unknown [Medicago truncatula]
          Length = 286

 Score =  200 bits (508), Expect = 1e-49
 Identities = 87/126 (69%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
 Frame = -1

Query: 557 IAYLQQTWWFEVNGEVEFPLPAGTYSIFFRLQLGKSTKRFGRRVCNSQNVHGWDIKPVQF 378
           +AYLQQ WWFEV+GEVEFP PAGTYS+FFR+ LGK +KRFGRRVCN+++VHGWD+KPV+F
Sbjct: 148 VAYLQQIWWFEVDGEVEFPFPAGTYSLFFRIHLGKPSKRFGRRVCNTEHVHGWDVKPVRF 207

Query: 377 QLSTPENQRPTS-CYLREPGTWNYYHGGDFVVQNSEKPTKIKFSMMQIDCTHTKGGLSVD 201
           QL T ++Q  +S C+L+ PG W YYH GDFVV++S   TK+KFSM QIDCTHTKGGL +D
Sbjct: 208 QLWTSDDQYDSSQCFLKGPGKWRYYHAGDFVVEDSNVSTKVKFSMTQIDCTHTKGGLCLD 267

Query: 200 SVLIYP 183
           SV +YP
Sbjct: 268 SVFVYP 273


>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  200 bits (508), Expect = 1e-49
 Identities = 91/126 (72%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
 Frame = -1

Query: 557 IAYLQQTWWFEVNGEVEFPLPAGTYSIFFRLQLGKSTKRFGRRVCNSQNVHGWDIKPVQF 378
           +AY+QQ WW EV+GEV+FP PAGTYSIFFRLQLG+++KR GRR+CN ++VHGWDIKPV+F
Sbjct: 148 VAYVQQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWDIKPVRF 207

Query: 377 QLSTPENQRPTS-CYLREPGTWNYYHGGDFVVQNSEKPTKIKFSMMQIDCTHTKGGLSVD 201
           QL T + Q  TS C+L EPG W  YH  DFVV NS  PTKIKFSM QIDCTHTKGGL VD
Sbjct: 208 QLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGLCVD 267

Query: 200 SVLIYP 183
           SVLIYP
Sbjct: 268 SVLIYP 273


>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score =  200 bits (508), Expect = 1e-49
 Identities = 91/126 (72%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
 Frame = -1

Query: 557 IAYLQQTWWFEVNGEVEFPLPAGTYSIFFRLQLGKSTKRFGRRVCNSQNVHGWDIKPVQF 378
           +AY+QQ WW EV+GEV+FP PAGTYSIFFRLQLG+++KR GRR+CN ++VHGWDIKPV+F
Sbjct: 148 VAYVQQIWWLEVDGEVDFPFPAGTYSIFFRLQLGRASKRLGRRICNPEHVHGWDIKPVRF 207

Query: 377 QLSTPENQRPTS-CYLREPGTWNYYHGGDFVVQNSEKPTKIKFSMMQIDCTHTKGGLSVD 201
           QL T + Q  TS C+L EPG W  YH  DFVV NS  PTKIKFSM QIDCTHTKGGL VD
Sbjct: 208 QLWTSDGQHATSQCFLDEPGRWIQYHAADFVVDNSNAPTKIKFSMTQIDCTHTKGGLCVD 267

Query: 200 SVLIYP 183
           SVLIYP
Sbjct: 268 SVLIYP 273


>ref|XP_002298062.1| f-box family protein [Populus trichocarpa]
           gi|222845320|gb|EEE82867.1| f-box family protein
           [Populus trichocarpa]
          Length = 299

 Score =  199 bits (505), Expect = 3e-49
 Identities = 86/126 (68%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
 Frame = -1

Query: 557 IAYLQQTWWFEVNGEVEFPLPAGTYSIFFRLQLGKSTKRFGRRVCNSQNVHGWDIKPVQF 378
           +AYLQQ WWFEV+G+ EFP PAGTYS+FFRLQLG++ KRFGRR+CN+++VHGWDIKPVQF
Sbjct: 164 VAYLQQIWWFEVDGQFEFPFPAGTYSLFFRLQLGRAAKRFGRRICNTEHVHGWDIKPVQF 223

Query: 377 QLSTPENQRPTS-CYLREPGTWNYYHGGDFVVQNSEKPTKIKFSMMQIDCTHTKGGLSVD 201
           QL T + Q  +S C+L +PG WN YH GDFVV  +   TK+KFSM QIDCTHTKGGL +D
Sbjct: 224 QLWTSDGQYASSQCFLEDPGKWNLYHAGDFVVDGTNASTKLKFSMTQIDCTHTKGGLCLD 283

Query: 200 SVLIYP 183
           S+L+YP
Sbjct: 284 SILVYP 289


>ref|XP_002304470.1| f-box family protein [Populus trichocarpa]
           gi|222841902|gb|EEE79449.1| f-box family protein
           [Populus trichocarpa]
          Length = 298

 Score =  199 bits (505), Expect = 3e-49
 Identities = 86/126 (68%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
 Frame = -1

Query: 557 IAYLQQTWWFEVNGEVEFPLPAGTYSIFFRLQLGKSTKRFGRRVCNSQNVHGWDIKPVQF 378
           +AYLQQ WWFEV+G+ EFP PAGTYS+FFRLQLG++ KRFGRR+CN+++VHGW+IKPVQF
Sbjct: 163 VAYLQQIWWFEVDGQFEFPFPAGTYSLFFRLQLGRAAKRFGRRICNTEHVHGWEIKPVQF 222

Query: 377 QLSTPENQRPTS-CYLREPGTWNYYHGGDFVVQNSEKPTKIKFSMMQIDCTHTKGGLSVD 201
           Q+ T + Q  +S C+L +PG WN YH GDFVV  S   TK+KFSM QIDCTHTKGGL +D
Sbjct: 223 QIWTSDGQHASSQCFLNDPGKWNLYHAGDFVVDGSNASTKLKFSMTQIDCTHTKGGLCLD 282

Query: 200 SVLIYP 183
           SVL+YP
Sbjct: 283 SVLVYP 288


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