BLASTX nr result

ID: Bupleurum21_contig00010177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010177
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   447   e-123
ref|XP_002321934.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like ...   446   e-123
ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus comm...   444   e-122
ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI...   443   e-122

>ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  447 bits (1151), Expect = e-123
 Identities = 213/292 (72%), Positives = 243/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 875  LNYTSGTTAAPKGVVHSHRGKFIPILDTLVEWSVPKQPVLLWTLPMFHANGWNFTWGMAV 696
            LNYTSGTT++PKGVVH HRG FI  +D+L++W VPKQPV LWTLPMFHANGW+F WGMA 
Sbjct: 225  LNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTLPMFHANGWSFPWGMAA 284

Query: 695  VGGTNICLRKFNAGTIYSAIDKHGVTHMCGAPVVLNMLSNYPEVKPLKSPVEILTAGAPP 516
            VGGTN+CLRKF+A  IY AI  H VTHMCGAPVVLNMLSN+P  +PLK+PV+ILTAGAPP
Sbjct: 285  VGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPVVLNMLSNWPGTEPLKNPVQILTAGAPP 344

Query: 515  PAAVLLKVESLGFKVTHSYGLTETGGFAVSCAWKSKWNQLPATEIARLKARQGVRTSGMT 336
            PAA+LL+ ES GF V+H YGLTETGG  VSC WK KWN+LPATE ARLK+RQGVRT GMT
Sbjct: 345  PAAILLRTESRGFIVSHGYGLTETGGLVVSCVWKQKWNRLPATERARLKSRQGVRTVGMT 404

Query: 335  EVDVIDTETGASVKRDGTSLGEIVLRGGCLMLGYLKDPEATAKCM-KDGWFYTGDVGVVY 159
            EVDV+D  +G SVKRDG+SLGEIVLRGGC+MLGYLKDP+ T+K +  DGWF+TGDVGV++
Sbjct: 405  EVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYLKDPKGTSKSLTDDGWFFTGDVGVMH 464

Query: 158  PDGYLEIKDRSKDVIIXXXXXXXXXXXXXVLYTHPSIIEAAVVARPDQFWGE 3
             DGYLEIKDRSKDVII             VLYTHP++ EAAVVARPD FWGE
Sbjct: 465  SDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGE 516


>ref|XP_002321934.1| predicted protein [Populus trichocarpa] gi|222868930|gb|EEF06061.1|
            predicted protein [Populus trichocarpa]
          Length = 553

 Score =  447 bits (1149), Expect = e-123
 Identities = 216/293 (73%), Positives = 242/293 (82%), Gaps = 2/293 (0%)
 Frame = -3

Query: 875  LNYTSGTTAAPKGVVHSHRGKFIPILDTLVEWSVPKQPVLLWTLPMFHANGWNFTWGMAV 696
            LNYTSGTTA+PKGVVH HRG FI  LD+L++WS PKQPV LWTLPMFH+NGW++ WGMA 
Sbjct: 189  LNYTSGTTASPKGVVHCHRGLFIVTLDSLIDWSFPKQPVFLWTLPMFHSNGWSYPWGMAA 248

Query: 695  VGGTNICLRKFNAGTIYSAIDKHGVTHMCGAPVVLNMLSNYPEV-KPLKSPVEILTAGAP 519
            VGGTNIC+RKF+A TIY  I+KH VTHMCGAPVVLNMLSN P + KPLK+PV I+TAGAP
Sbjct: 249  VGGTNICIRKFDAPTIYGLIEKHRVTHMCGAPVVLNMLSNSPTIIKPLKNPVHIITAGAP 308

Query: 518  PPAAVLLKVESLGFKVTHSYGLTETGGFAVSCAWKSKWNQLPATEIARLKARQGVRTSGM 339
            PPA +L + ESLGF V H YGLTETGG  VSCAWK +W+  PATE ARLKARQGVRT GM
Sbjct: 309  PPATILSRTESLGFVVGHGYGLTETGGIVVSCAWKRQWSLFPATERARLKARQGVRTIGM 368

Query: 338  TEVDVIDTETGASVKRDGTSLGEIVLRGGCLMLGYLKDPEATAKCM-KDGWFYTGDVGVV 162
             EVDV+D  TG SVKRDG++LGEIVLRGGC+MLGYLKDP ATAKCM ++GWFYTGDVGV+
Sbjct: 369  NEVDVVDPITGTSVKRDGSTLGEIVLRGGCIMLGYLKDPVATAKCMTENGWFYTGDVGVM 428

Query: 161  YPDGYLEIKDRSKDVIIXXXXXXXXXXXXXVLYTHPSIIEAAVVARPDQFWGE 3
            +PDGYLEIKDRSKDVII             VLYT P I EAAVVARPD+FWGE
Sbjct: 429  HPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTFPDINEAAVVARPDEFWGE 481


>ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
            trichocarpa] gi|222873762|gb|EEF10893.1| acyl:coa ligase
            acetate-coa synthetase-like protein [Populus trichocarpa]
          Length = 554

 Score =  446 bits (1147), Expect = e-123
 Identities = 218/293 (74%), Positives = 241/293 (82%), Gaps = 2/293 (0%)
 Frame = -3

Query: 875  LNYTSGTTAAPKGVVHSHRGKFIPILDTLVEWSVPKQPVLLWTLPMFHANGWNFTWGMAV 696
            LNYTSGTT++PKGVVH HRG FI  LD+LV+WS PKQPV LWTLPMFH+NGW++ WGMA 
Sbjct: 190  LNYTSGTTSSPKGVVHCHRGLFIVTLDSLVDWSFPKQPVFLWTLPMFHSNGWSYPWGMAA 249

Query: 695  VGGTNICLRKFNAGTIYSAIDKHGVTHMCGAPVVLNMLSNYP-EVKPLKSPVEILTAGAP 519
            VGGTNICLRKF+A TIY  I KHGVTHMCGAPVVLNMLSN P  ++PLK+PV I+TAGAP
Sbjct: 250  VGGTNICLRKFDAPTIYGLIKKHGVTHMCGAPVVLNMLSNSPITMEPLKNPVHIITAGAP 309

Query: 518  PPAAVLLKVESLGFKVTHSYGLTETGGFAVSCAWKSKWNQLPATEIARLKARQGVRTSGM 339
            PPA +L + ESLGF V H YGLTETGG  VSCAWK +WN  PATE ARLKARQGVRT GM
Sbjct: 310  PPATILSRTESLGFVVGHGYGLTETGGIVVSCAWKRQWNLFPATERARLKARQGVRTVGM 369

Query: 338  TEVDVIDTETGASVKRDGTSLGEIVLRGGCLMLGYLKDPEATAKCM-KDGWFYTGDVGVV 162
            TEVDV+D  TG SVKRDG +LGEIVLRGGC+MLGYLKDP ATAKCM ++GWF TGDVGV+
Sbjct: 370  TEVDVVDPVTGMSVKRDGLTLGEIVLRGGCIMLGYLKDPVATAKCMTENGWFCTGDVGVM 429

Query: 161  YPDGYLEIKDRSKDVIIXXXXXXXXXXXXXVLYTHPSIIEAAVVARPDQFWGE 3
            +PDGYLEIKDRSKDVII             VLYT P I EAAVVARPD+FWGE
Sbjct: 430  HPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTFPDINEAAVVARPDEFWGE 482


>ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223538956|gb|EEF40553.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 556

 Score =  444 bits (1141), Expect = e-122
 Identities = 207/292 (70%), Positives = 245/292 (83%), Gaps = 1/292 (0%)
 Frame = -3

Query: 875  LNYTSGTTAAPKGVVHSHRGKFIPILDTLVEWSVPKQPVLLWTLPMFHANGWNFTWGMAV 696
            LNYTSGTT++PKGVVH HRG +I  +++L++W+VP+QPV LWTLP+FHANGW+F WGMA 
Sbjct: 193  LNYTSGTTSSPKGVVHCHRGIYIITVESLIDWNVPRQPVYLWTLPLFHANGWSFPWGMAA 252

Query: 695  VGGTNICLRKFNAGTIYSAIDKHGVTHMCGAPVVLNMLSNYPEVKPLKSPVEILTAGAPP 516
            VGGTNIC+RKF+A +IY  I +HGVTHMCGAPVVLNML+N P+ +PLK PV ILTAGAPP
Sbjct: 253  VGGTNICIRKFDASSIYGLIKRHGVTHMCGAPVVLNMLTNSPDNEPLKRPVHILTAGAPP 312

Query: 515  PAAVLLKVESLGFKVTHSYGLTETGGFAVSCAWKSKWNQLPATEIARLKARQGVRTSGMT 336
            PAAVL + ESLGF V+H YGLTET G  VSCAWK KWN +PA+E ARLKARQGVR +G T
Sbjct: 313  PAAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTVPASERARLKARQGVRIAGFT 372

Query: 335  EVDVIDTETGASVKRDGTSLGEIVLRGGCLMLGYLKDPEATAKCMK-DGWFYTGDVGVVY 159
            E+DVID +TG SVKRDG SLGEIVLRGGC+M+GYLKDP+ T+KC+K DGWFYTGDVGV++
Sbjct: 373  EIDVIDPKTGLSVKRDGLSLGEIVLRGGCVMMGYLKDPDGTSKCLKDDGWFYTGDVGVMH 432

Query: 158  PDGYLEIKDRSKDVIIXXXXXXXXXXXXXVLYTHPSIIEAAVVARPDQFWGE 3
            PDGYLEIKDRSKDVII             VLY++P + EAAVVARPD++WGE
Sbjct: 433  PDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVVNEAAVVARPDEYWGE 484


>ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 549

 Score =  443 bits (1139), Expect = e-122
 Identities = 209/292 (71%), Positives = 241/292 (82%), Gaps = 1/292 (0%)
 Frame = -3

Query: 875  LNYTSGTTAAPKGVVHSHRGKFIPILDTLVEWSVPKQPVLLWTLPMFHANGWNFTWGMAV 696
            LNYTSGTT++PKGVVH HRG FI  +D+LVEWSVPKQPV LWTLPMFH NGW FTWGMA 
Sbjct: 186  LNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMFHGNGWTFTWGMAA 245

Query: 695  VGGTNICLRKFNAGTIYSAIDKHGVTHMCGAPVVLNMLSNYPEVKPLKSPVEILTAGAPP 516
            +GGTN+CLRKF+A  IY AI K+G+THMC APVVLNMLSNYP  +PL  PV+ILTAGAPP
Sbjct: 246  IGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPLGDPVKILTAGAPP 305

Query: 515  PAAVLLKVESLGFKVTHSYGLTETGGFAVSCAWKSKWNQLPATEIARLKARQGVRTSGMT 336
            P +VLL+ ESLGF V+H YG+TET G  VSCAWK +W++ PA+E AR+KARQGVRT  MT
Sbjct: 306  PYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERARVKARQGVRTVVMT 365

Query: 335  EVDVIDTETGASVKRDGTSLGEIVLRGGCLMLGYLKDPEATAKCM-KDGWFYTGDVGVVY 159
            EVDV+D ++G SVKRDG+SLGEIVLRG C+MLGYLKDPE T+KCM K+GW YTGDV V++
Sbjct: 366  EVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSKEGWLYTGDVAVMH 425

Query: 158  PDGYLEIKDRSKDVIIXXXXXXXXXXXXXVLYTHPSIIEAAVVARPDQFWGE 3
            PDGY+EIKDRSKDVII             VLYTHP++ EAAVVARPD FWGE
Sbjct: 426  PDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGE 477


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