BLASTX nr result

ID: Bupleurum21_contig00010162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010162
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|2...   476   e-132
ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   475   e-132
ref|XP_003521112.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   474   e-131
ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   473   e-131
ref|XP_002875020.1| hypothetical protein ARALYDRAFT_490504 [Arab...   473   e-131

>ref|XP_002301349.1| predicted protein [Populus trichocarpa] gi|222843075|gb|EEE80622.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  476 bits (1225), Expect = e-132
 Identities = 240/294 (81%), Positives = 249/294 (84%)
 Frame = +3

Query: 3    SQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGICNLQNCA 182
            SQVCKELGKHLKI+VM TTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG+C L+NC+
Sbjct: 210  SQVCKELGKHLKIQVMATTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKNCS 269

Query: 183  MLVMDEADKLLSPEFQPSIEHLISFLPTNRQILMFSATFPVTVKDFKDRYLQKPYVINLM 362
            MLV+DEADKLLSPEFQPSIE LI FLP+NRQILMFSATFPVTVKDFKDRYL+KPYVINLM
Sbjct: 270  MLVLDEADKLLSPEFQPSIEQLIRFLPSNRQILMFSATFPVTVKDFKDRYLEKPYVINLM 329

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIFCNSVNRVELLARKITEL 542
                                                    IIFCNSVNRVELLA+KITEL
Sbjct: 330  DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQS----IIFCNSVNRVELLAKKITEL 385

Query: 543  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAET 722
            GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK+AET
Sbjct: 386  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 445

Query: 723  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 884
            YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQ IYCQ
Sbjct: 446  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQTIYCQ 499


>ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
          Length = 500

 Score =  475 bits (1223), Expect = e-132
 Identities = 242/294 (82%), Positives = 249/294 (84%)
 Frame = +3

Query: 3    SQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGICNLQNCA 182
            SQVCKELGKHLKI+VMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG+C L++CA
Sbjct: 211  SQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCA 270

Query: 183  MLVMDEADKLLSPEFQPSIEHLISFLPTNRQILMFSATFPVTVKDFKDRYLQKPYVINLM 362
            MLVMDEADKLLSPEFQPSIE LI FLPT RQILMFSATFPVTVKDFKDRYLQKPYVINLM
Sbjct: 271  MLVMDEADKLLSPEFQPSIEQLIHFLPTTRQILMFSATFPVTVKDFKDRYLQKPYVINLM 330

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIFCNSVNRVELLARKITEL 542
                                                    IIFCNSVNRVELLA+KITEL
Sbjct: 331  DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS----IIFCNSVNRVELLAKKITEL 386

Query: 543  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAET 722
            GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK+AET
Sbjct: 387  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 446

Query: 723  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 884
            YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP IDQAIYC+
Sbjct: 447  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPQIDQAIYCR 500


>ref|XP_003521112.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
          Length = 502

 Score =  474 bits (1219), Expect = e-131
 Identities = 241/294 (81%), Positives = 249/294 (84%)
 Frame = +3

Query: 3    SQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGICNLQNCA 182
            SQVCKELGKHLKI+VMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG+C L++CA
Sbjct: 213  SQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCA 272

Query: 183  MLVMDEADKLLSPEFQPSIEHLISFLPTNRQILMFSATFPVTVKDFKDRYLQKPYVINLM 362
            MLVMDEADKLLSPEFQPSIE LI FLPT RQILMFSATFPVTVKDFKDRYL+KPYVINLM
Sbjct: 273  MLVMDEADKLLSPEFQPSIEQLIHFLPTTRQILMFSATFPVTVKDFKDRYLRKPYVINLM 332

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIFCNSVNRVELLARKITEL 542
                                                    IIFCNSVNRVELLA+KITEL
Sbjct: 333  DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS----IIFCNSVNRVELLAKKITEL 388

Query: 543  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAET 722
            GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK+AET
Sbjct: 389  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 448

Query: 723  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 884
            YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP IDQAIYC+
Sbjct: 449  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPQIDQAIYCR 502


>ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
            sativus] gi|449480172|ref|XP_004155819.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
            sativus]
          Length = 492

 Score =  473 bits (1218), Expect = e-131
 Identities = 238/294 (80%), Positives = 250/294 (85%)
 Frame = +3

Query: 3    SQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGICNLQNCA 182
            SQVCKELGK+L I+VMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG+C L++C+
Sbjct: 203  SQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCS 262

Query: 183  MLVMDEADKLLSPEFQPSIEHLISFLPTNRQILMFSATFPVTVKDFKDRYLQKPYVINLM 362
            ML+MDEADKLLSPEFQPSIEHLI FLPTNRQILM+SATFPVTVKDFKDRYL KPYVINLM
Sbjct: 263  MLIMDEADKLLSPEFQPSIEHLIRFLPTNRQILMYSATFPVTVKDFKDRYLHKPYVINLM 322

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIFCNSVNRVELLARKITEL 542
                                                    IIFCNSVNRVELLA+KITEL
Sbjct: 323  DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS----IIFCNSVNRVELLAKKITEL 378

Query: 543  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAET 722
            GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK++ET
Sbjct: 379  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSET 438

Query: 723  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 884
            YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYC+
Sbjct: 439  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 492


>ref|XP_002875020.1| hypothetical protein ARALYDRAFT_490504 [Arabidopsis lyrata subsp.
            lyrata] gi|297320857|gb|EFH51279.1| hypothetical protein
            ARALYDRAFT_490504 [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  473 bits (1217), Expect = e-131
 Identities = 239/294 (81%), Positives = 249/294 (84%)
 Frame = +3

Query: 3    SQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGICNLQNCA 182
            SQVCKELGKHLKI+VMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKG+C L++C+
Sbjct: 218  SQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCS 277

Query: 183  MLVMDEADKLLSPEFQPSIEHLISFLPTNRQILMFSATFPVTVKDFKDRYLQKPYVINLM 362
            +LVMDEADKLLS EFQPS+EHLISFLP NRQILMFSATFPVTVKDFKDR+L  PYVINLM
Sbjct: 278  VLVMDEADKLLSQEFQPSVEHLISFLPENRQILMFSATFPVTVKDFKDRFLTNPYVINLM 337

Query: 363  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIFCNSVNRVELLARKITEL 542
                                                    IIFCNSVNRVELLA+KITEL
Sbjct: 338  DELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQS----IIFCNSVNRVELLAKKITEL 393

Query: 543  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAET 722
            GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK+AET
Sbjct: 394  GYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAET 453

Query: 723  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 884
            YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ
Sbjct: 454  YLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 507