BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010159
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   356   2e-96
ref|XP_002874350.1| nucleoside-triphosphatase/ nucleotide bindin...   355   3e-96
ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2...   353   9e-96
ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis t...   351   4e-95
gb|AFK37872.1| unknown [Lotus japonicus]                              348   5e-94

>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
           gi|296089274|emb|CBI39046.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  356 bits (913), Expect = 2e-96
 Identities = 172/189 (91%), Positives = 181/189 (95%)
 Frame = -3

Query: 572 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 393
           MLWVDKYRPK LD +IVH DVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMA+LRQMFG
Sbjct: 1   MLWVDKYRPKTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFG 60

Query: 392 ASVEKVKVENKAWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 213
            S +KVKVENK WK+DAG+RTIDLELTTLSSTHH+ELNP DAGFQDRYIVQEIIKEMAKN
Sbjct: 61  PSADKVKVENKTWKIDAGTRTIDLELTTLSSTHHMELNPGDAGFQDRYIVQEIIKEMAKN 120

Query: 212 RPIDIKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 33
           RPID KGKKGF+VLVLNEVD+LSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
Sbjct: 121 RPIDTKGKKGFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 180

Query: 32  CLNVRINAP 6
           CLN+RINAP
Sbjct: 181 CLNIRINAP 189


>ref|XP_002874350.1| nucleoside-triphosphatase/ nucleotide binding protein [Arabidopsis
           lyrata subsp. lyrata] gi|297320187|gb|EFH50609.1|
           nucleoside-triphosphatase/ nucleotide binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 359

 Score =  355 bits (911), Expect = 3e-96
 Identities = 173/189 (91%), Positives = 185/189 (97%)
 Frame = -3

Query: 572 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 393
           MLWVDKYRPK+LDKVIVH+D+AQNLKKLVTEQDCPHLLFYGP GSGKKTLIMALL+Q++G
Sbjct: 1   MLWVDKYRPKSLDKVIVHEDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLKQIYG 60

Query: 392 ASVEKVKVENKAWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 213
           AS EKVKVEN+AWKVDAGSRTIDLELTTLSST+HVEL PSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 212 RPIDIKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 33
           RPID KGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYS+SCRLILCCNSSSKVTEA++SR
Sbjct: 121 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 180

Query: 32  CLNVRINAP 6
           CLNVRINAP
Sbjct: 181 CLNVRINAP 189


>ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  353 bits (907), Expect = 9e-96
 Identities = 172/190 (90%), Positives = 183/190 (96%)
 Frame = -3

Query: 572 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 393
           MLWVDKYRPK LD+VIVHQ++A+NLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQ+FG
Sbjct: 1   MLWVDKYRPKTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG 60

Query: 392 ASVEKVKVENKAWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 213
            S EKVKVEN+ WK+DAGSRTIDLELTTLSST+HVEL+PSD GFQDRYIVQEIIKEMAKN
Sbjct: 61  TSAEKVKVENRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKN 120

Query: 212 RPIDIKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 33
           RPID KGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEA+RSR
Sbjct: 121 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR 180

Query: 32  CLNVRINAPK 3
           CLNVRINAPK
Sbjct: 181 CLNVRINAPK 190


>ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis thaliana]
           gi|18389268|gb|AAL67077.1| putative replication factor C
           [Arabidopsis thaliana] gi|20259637|gb|AAM14175.1|
           putative replication factor C [Arabidopsis thaliana]
           gi|332006337|gb|AED93720.1| replication factor C subunit
           3/5 [Arabidopsis thaliana]
          Length = 354

 Score =  351 bits (901), Expect = 4e-95
 Identities = 171/189 (90%), Positives = 184/189 (97%)
 Frame = -3

Query: 572 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 393
           MLWVDKYRPK+LDKVIVH+D+AQ LKKLV+EQDCPHLLFYGP GSGKKTLIMALL+Q++G
Sbjct: 1   MLWVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYG 60

Query: 392 ASVEKVKVENKAWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 213
           AS EKVKVEN+AWKVDAGSRTIDLELTTLSST+HVEL PSDAGFQDRYIVQEIIKEMAKN
Sbjct: 61  ASAEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 120

Query: 212 RPIDIKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 33
           RPID KGKKG+KVLVLNEVDKLSREAQHSLRRTMEKYS+SCRLILCCNSSSKVTEA++SR
Sbjct: 121 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 180

Query: 32  CLNVRINAP 6
           CLNVRINAP
Sbjct: 181 CLNVRINAP 189


>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  348 bits (892), Expect = 5e-94
 Identities = 167/189 (88%), Positives = 180/189 (95%)
 Frame = -3

Query: 572 MLWVDKYRPKALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG 393
           MLWVDKYRPK LD+V+VH DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLIMALLRQMFG
Sbjct: 1   MLWVDKYRPKTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG 60

Query: 392 ASVEKVKVENKAWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN 213
            + EKVKVEN+ WKVDAGSR+IDLELTTLSS HH+E++PSDAGFQDRY+VQEIIKEMAKN
Sbjct: 61  TAAEKVKVENRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKN 120

Query: 212 RPIDIKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR 33
           RPID KGKKGFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSR
Sbjct: 121 RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR 180

Query: 32  CLNVRINAP 6
           CLN+RINAP
Sbjct: 181 CLNIRINAP 189