BLASTX nr result

ID: Bupleurum21_contig00010146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010146
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267...   167   9e-40
emb|CBI18099.3| unnamed protein product [Vitis vinifera]              166   2e-39
emb|CBI25412.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246...   163   2e-38
ref|XP_002520804.1| conserved hypothetical protein [Ricinus comm...   157   1e-36

>ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267149 [Vitis vinifera]
          Length = 664

 Score =  167 bits (423), Expect = 9e-40
 Identities = 78/137 (56%), Positives = 100/137 (72%)
 Frame = +3

Query: 6   HYAYVKNIYRGLVLFLFNYTDRTLHGIFEADSHGQMNLDLHAWTDDGAELTPYPAQVKVR 185
           H+ YVKN+  GL LFLFNY+DR LHGIFEA S GQMN++ + WT DGAE T YPAQV++R
Sbjct: 59  HFLYVKNVDPGLPLFLFNYSDRKLHGIFEAASPGQMNINPYGWTTDGAERTLYPAQVQIR 118

Query: 186 IQRRCCTLTEDQFRPIISSNYYEQSFFWFELDRSQTSKLVSLFSSLSYDAGASTLKDKTS 365
           ++ +C  L E+QFRPII+ NYY QS FWFELD +Q SKL+SL SS +    AS  ++  +
Sbjct: 119 VRLQCQPLPEEQFRPIIADNYYSQSHFWFELDHAQASKLISLLSSRAVAPSASVPQNSAA 178

Query: 366 WNTFSYPLPMSNTRQEG 416
           W T   PLP+ N ++EG
Sbjct: 179 WRTLFRPLPLCNKKEEG 195


>emb|CBI18099.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/154 (53%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
 Frame = +3

Query: 6   HYAYVKNIYRGLVLFLFNYTDRTLHGIFEADSHGQMNLDLHAWTDDGAELTPYPAQVKVR 185
           H+ YVKN+  GL LFLFNY+DR LHGIFEA S GQMN++ + WT DGAE T YPAQV++R
Sbjct: 71  HFLYVKNVDPGLPLFLFNYSDRKLHGIFEAASPGQMNINPYGWTTDGAERTLYPAQVQIR 130

Query: 186 IQRRCCTLTEDQFRPIISSNYYEQSFFWFELDRSQTSKLVSLFSSLSYDAGASTLKDKTS 365
           ++ +C  L E+QFRPII+ NYY QS FWFELD +Q SKL+SL SS +    AS  ++  +
Sbjct: 131 VRLQCQPLPEEQFRPIIADNYYSQSHFWFELDHAQASKLISLLSSRAVAPSASVPQNSAA 190

Query: 366 WNTFSYPLPMSNTRQEGR----LCLSSNMGVVSN 455
           W T   PLP+ N ++E      L  SS+  VV N
Sbjct: 191 WRTLFRPLPLCNKKEEDESNLPLEASSDKQVVEN 224


>emb|CBI25412.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  163 bits (412), Expect = 2e-38
 Identities = 95/224 (42%), Positives = 126/224 (56%), Gaps = 48/224 (21%)
 Frame = +3

Query: 6   HYAYVKNIYRGLVLFLFNYTDRTLHGIFEADSHGQMNLDLHAWTDDGAELTPYPAQVKVR 185
           H++YV+NI  GL LFLFNY+DR LHGIFEA S GQMN++ + WT DG++LTPYPAQV+++
Sbjct: 63  HFSYVRNINPGLTLFLFNYSDRKLHGIFEAASPGQMNINPYGWTPDGSQLTPYPAQVRIQ 122

Query: 186 IQRRCCTLTEDQFRPIISSNYYEQSFFWFELDRSQTSKLVSLFSS--------------- 320
           I+ +C  L E+QF+PIIS NYYE   FWFELDR+QTSKLVSLFSS               
Sbjct: 123 IRMQCQPLLEEQFKPIISKNYYEHRLFWFELDRAQTSKLVSLFSSSPSLSQKTVKWNTTL 182

Query: 321 ----------LSYD-------AGASTLKDKTSWNTFSY----PLPMSNTRQEGRLCLS-- 431
                      S+D        GAS ++  +SWN          P   T +E     S  
Sbjct: 183 KGLPTGTTLGTSHDEEVDCNRLGASNVEWGSSWNEHGLGGENQFPDGTTEEEAAEKHSQD 242

Query: 432 ----------SNMGVVSNANTSISQKAWTSLFKSSSHDDGMQND 533
                     S+  +  N +TS+ +K W+SLFK S   + ++ D
Sbjct: 243 VIHSKPNYWPSHSSLERNISTSLPEKKWSSLFKMSLTSETIKGD 286


>ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246676 [Vitis vinifera]
          Length = 818

 Score =  163 bits (412), Expect = 2e-38
 Identities = 95/224 (42%), Positives = 126/224 (56%), Gaps = 48/224 (21%)
 Frame = +3

Query: 6   HYAYVKNIYRGLVLFLFNYTDRTLHGIFEADSHGQMNLDLHAWTDDGAELTPYPAQVKVR 185
           H++YV+NI  GL LFLFNY+DR LHGIFEA S GQMN++ + WT DG++LTPYPAQV+++
Sbjct: 63  HFSYVRNINPGLTLFLFNYSDRKLHGIFEAASPGQMNINPYGWTPDGSQLTPYPAQVRIQ 122

Query: 186 IQRRCCTLTEDQFRPIISSNYYEQSFFWFELDRSQTSKLVSLFSS--------------- 320
           I+ +C  L E+QF+PIIS NYYE   FWFELDR+QTSKLVSLFSS               
Sbjct: 123 IRMQCQPLLEEQFKPIISKNYYEHRLFWFELDRAQTSKLVSLFSSSPSLSQKTVKWNTTL 182

Query: 321 ----------LSYD-------AGASTLKDKTSWNTFSY----PLPMSNTRQEGRLCLS-- 431
                      S+D        GAS ++  +SWN          P   T +E     S  
Sbjct: 183 KGLPTGTTLGTSHDEEVDCNRLGASNVEWGSSWNEHGLGGENQFPDGTTEEEAAEKHSQD 242

Query: 432 ----------SNMGVVSNANTSISQKAWTSLFKSSSHDDGMQND 533
                     S+  +  N +TS+ +K W+SLFK S   + ++ D
Sbjct: 243 VIHSKPNYWPSHSSLERNISTSLPEKKWSSLFKMSLTSETIKGD 286


>ref|XP_002520804.1| conserved hypothetical protein [Ricinus communis]
           gi|223539935|gb|EEF41513.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 753

 Score =  157 bits (396), Expect = 1e-36
 Identities = 85/204 (41%), Positives = 113/204 (55%), Gaps = 36/204 (17%)
 Frame = +3

Query: 3   PHYAYVKNIYRGLVLFLFNYTDRTLHGIFEADSHGQMNLDLHAWTDDGAELTPYPAQVKV 182
           PH+ YVKNIY G+ LFLFNY+DR LHGIFEA +HG +N++  AW +DG + TPY AQVK 
Sbjct: 62  PHFLYVKNIYPGMPLFLFNYSDRKLHGIFEAANHGGLNINSQAWIEDGLDSTPYAAQVKF 121

Query: 183 RIQRRCCTLTEDQFRPIISSNYYEQSFFWFELDRSQTSKLVSLFSS---------LSYDA 335
            IQ +C  L EDQF PII+ NYY    FWFELD +QT KL+SLFSS         L  + 
Sbjct: 122 HIQMKCQPLVEDQFGPIIAENYYAPKLFWFELDHNQTKKLISLFSSSPIIQKQNVLHKEK 181

Query: 336 GASTLKDKTSWNTFSYPLPMSNT---------------------------RQEGRLCLSS 434
           G S ++  +  +  S    MS++                           + +   C SS
Sbjct: 182 GISCVRPSSGLSYCSIVKSMSSSVVRTDQSDIKQGTCVDQLDIIQGVHTVQTDSAGCYSS 241

Query: 435 NMGVVSNANTSISQKAWTSLFKSS 506
           +  +V    TS+S+K WT+LF  +
Sbjct: 242 DPPIVGGLTTSLSKKPWTALFNKA 265


Top