BLASTX nr result

ID: Bupleurum21_contig00010133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010133
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25412.3| unnamed protein product [Vitis vinifera]              128   5e-28
ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246...   128   5e-28
ref|XP_002882708.1| hypothetical protein ARALYDRAFT_478446 [Arab...   123   2e-26
ref|NP_001154604.1| DCD (Development and Cell Death) domain prot...   123   2e-26
ref|NP_187711.3| DCD (Development and Cell Death) domain protein...   123   2e-26

>emb|CBI25412.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/91 (65%), Positives = 71/91 (78%)
 Frame = +3

Query: 3   PFAKANISAPARNLAKSDLGAVIFGCKNHTIKECYSKELFGLPAPHYAYVKNIYRGLVLF 182
           P    N S  ARNL KSDLG VIFGCK++TI EC+SK+LFGLPA H++YV+NI  GL LF
Sbjct: 18  PSWTVNCSVTARNLGKSDLGGVIFGCKHNTIDECHSKQLFGLPAAHFSYVRNINPGLTLF 77

Query: 183 LFNYSDRTLHGIFEADSHGQMNLDHHAWSDD 275
           LFNYSDR LHGIFEA S GQMN++ + W+ D
Sbjct: 78  LFNYSDRKLHGIFEAASPGQMNINPYGWTPD 108


>ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246676 [Vitis vinifera]
          Length = 818

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/91 (65%), Positives = 71/91 (78%)
 Frame = +3

Query: 3   PFAKANISAPARNLAKSDLGAVIFGCKNHTIKECYSKELFGLPAPHYAYVKNIYRGLVLF 182
           P    N S  ARNL KSDLG VIFGCK++TI EC+SK+LFGLPA H++YV+NI  GL LF
Sbjct: 18  PSWTVNCSVTARNLGKSDLGGVIFGCKHNTIDECHSKQLFGLPAAHFSYVRNINPGLTLF 77

Query: 183 LFNYSDRTLHGIFEADSHGQMNLDHHAWSDD 275
           LFNYSDR LHGIFEA S GQMN++ + W+ D
Sbjct: 78  LFNYSDRKLHGIFEAASPGQMNINPYGWTPD 108


>ref|XP_002882708.1| hypothetical protein ARALYDRAFT_478446 [Arabidopsis lyrata subsp.
           lyrata] gi|297328548|gb|EFH58967.1| hypothetical protein
           ARALYDRAFT_478446 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/78 (74%), Positives = 63/78 (80%)
 Frame = +3

Query: 36  RNLAKSDLGAVIFGCKNHTIKECYSKELFGLPAPHYAYVKNIYRGLVLFLFNYSDRTLHG 215
           RNL K DL  VIFGCK  TIKECY+K LFGLPAPH AY+KNI  GL LFLFNYSDRTLHG
Sbjct: 4   RNLKKGDLCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHG 63

Query: 216 IFEADSHGQMNLDHHAWS 269
           IFEA S G++N+D  AWS
Sbjct: 64  IFEAASEGKLNIDSKAWS 81


>ref|NP_001154604.1| DCD (Development and Cell Death) domain protein [Arabidopsis
           thaliana] gi|332641471|gb|AEE74992.1| DCD (Development
           and Cell Death) domain protein [Arabidopsis thaliana]
          Length = 607

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/78 (74%), Positives = 63/78 (80%)
 Frame = +3

Query: 36  RNLAKSDLGAVIFGCKNHTIKECYSKELFGLPAPHYAYVKNIYRGLVLFLFNYSDRTLHG 215
           RNL K DL  VIFGCK  TIKECY+K LFGLPAPH AY+KNI  GL LFLFNYSDRTLHG
Sbjct: 123 RNLKKGDLCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHG 182

Query: 216 IFEADSHGQMNLDHHAWS 269
           IFEA S G++N+D  AWS
Sbjct: 183 IFEAASEGKLNIDSKAWS 200


>ref|NP_187711.3| DCD (Development and Cell Death) domain protein [Arabidopsis
           thaliana] gi|56236054|gb|AAV84483.1| At3g11000
           [Arabidopsis thaliana] gi|56790220|gb|AAW30027.1|
           At3g11000 [Arabidopsis thaliana]
           gi|332641470|gb|AEE74991.1| DCD (Development and Cell
           Death) domain protein [Arabidopsis thaliana]
          Length = 488

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/78 (74%), Positives = 63/78 (80%)
 Frame = +3

Query: 36  RNLAKSDLGAVIFGCKNHTIKECYSKELFGLPAPHYAYVKNIYRGLVLFLFNYSDRTLHG 215
           RNL K DL  VIFGCK  TIKECY+K LFGLPAPH AY+KNI  GL LFLFNYSDRTLHG
Sbjct: 4   RNLKKGDLCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHG 63

Query: 216 IFEADSHGQMNLDHHAWS 269
           IFEA S G++N+D  AWS
Sbjct: 64  IFEAASEGKLNIDSKAWS 81


Top