BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010131
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...   105   1e-45
ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...   112   9e-45
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...   103   8e-43
ref|XP_002512497.1| pentatricopeptide repeat-containing protein,...   100   3e-41
emb|CBI39579.3| unnamed protein product [Vitis vinifera]              105   2e-39

>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score =  105 bits (262), Expect(2) = 1e-45
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = -3

Query: 459 ERRILRLLHGQKTRLRLREIHAHFLRHHLHQSNQILTHMVSVCAAANKVSYAYSLFQQSQ 280
           ERRILR LHG+KTR +L +IHAH LRHHLHQSNQIL+H +SVC A +K+ YA  +F Q+Q
Sbjct: 9   ERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQ 68

Query: 279 NPNIFLFNSII 247
           NPN+ LFNS+I
Sbjct: 69  NPNLLLFNSMI 79



 Score =  102 bits (255), Expect(2) = 1e-45
 Identities = 41/76 (53%), Positives = 61/76 (80%)
 Frame = -1

Query: 230 LFKACSNLLDVKLGQGVHGEIVVMGFDCFSKVAIGVVELYCKCGKMDDARKVFDYISKRD 51
           L K+CS + D ++G+GVHG ++V+GF+ FS + IG+++LY  CG+M+DA+KVFD +  RD
Sbjct: 113 LLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRD 172

Query: 50  VIVWNLMVYGFCNVGN 3
           VIVWN+M+ GFC VG+
Sbjct: 173 VIVWNMMIRGFCKVGD 188


>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score =  112 bits (280), Expect(2) = 9e-45
 Identities = 53/72 (73%), Positives = 60/72 (83%)
 Frame = -3

Query: 462 IERRILRLLHGQKTRLRLREIHAHFLRHHLHQSNQILTHMVSVCAAANKVSYAYSLFQQS 283
           IERRILRLLHG K+R  L +IHAHFLRH LHQSNQIL H +SVCA+ N+++YA  LF QS
Sbjct: 8   IERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQS 67

Query: 282 QNPNIFLFNSII 247
            NPNIFLFNSII
Sbjct: 68  HNPNIFLFNSII 79



 Score = 93.2 bits (230), Expect(2) = 9e-45
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -1

Query: 230 LFKACSNLLDVKLGQGVHGEIVVMGFDCFSKVAIGVVELYCKCGKMDDARKVFDYISKRD 51
           L K+C+NL +  LGQ V  E+   GF CF  + IGVVELY  C KM+DA K+FD +S RD
Sbjct: 113 LLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRD 172

Query: 50  VIVWNLMVYGFCNVGN 3
           V+VWNLM+ GFC  GN
Sbjct: 173 VVVWNLMIRGFCKTGN 188


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  103 bits (256), Expect(2) = 8e-43
 Identities = 47/72 (65%), Positives = 61/72 (84%)
 Frame = -3

Query: 462 IERRILRLLHGQKTRLRLREIHAHFLRHHLHQSNQILTHMVSVCAAANKVSYAYSLFQQS 283
           IER ILRLLHG++TR +LREIHAHFLRH L+Q NQIL+H VS+C + NK++YA  +F+Q+
Sbjct: 8   IERNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQT 67

Query: 282 QNPNIFLFNSII 247
           QNP I LFN++I
Sbjct: 68  QNPTIILFNAMI 79



 Score = 95.9 bits (237), Expect(2) = 8e-43
 Identities = 43/76 (56%), Positives = 60/76 (78%)
 Frame = -1

Query: 230 LFKACSNLLDVKLGQGVHGEIVVMGFDCFSKVAIGVVELYCKCGKMDDARKVFDYISKRD 51
           L KACS+L  ++LG+ +H E++V+GF+ FS + IGV+ELY  CG M+DA KVFD + +RD
Sbjct: 113 LLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRD 172

Query: 50  VIVWNLMVYGFCNVGN 3
           VIVWNLM++GFC  G+
Sbjct: 173 VIVWNLMIHGFCKRGD 188


>ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548458|gb|EEF49949.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 459

 Score =  100 bits (249), Expect(2) = 3e-41
 Identities = 41/76 (53%), Positives = 60/76 (78%)
 Frame = -1

Query: 230 LFKACSNLLDVKLGQGVHGEIVVMGFDCFSKVAIGVVELYCKCGKMDDARKVFDYISKRD 51
           L KACS+L D+KLGQ +H +++++GF+CF  + IGVVELY  CG ++D++KVFD + +RD
Sbjct: 271 LLKACSSLYDLKLGQCIHKDVIMIGFECFCSIQIGVVELYANCGLLEDSKKVFDEMRERD 330

Query: 50  VIVWNLMVYGFCNVGN 3
            IVWNLM+ G+C  G+
Sbjct: 331 SIVWNLMIRGYCRRGD 346



 Score = 93.2 bits (230), Expect(2) = 3e-41
 Identities = 43/72 (59%), Positives = 54/72 (75%)
 Frame = -3

Query: 462 IERRILRLLHGQKTRLRLREIHAHFLRHHLHQSNQILTHMVSVCAAANKVSYAYSLFQQS 283
           IER+IL+LLHG  TR +LR+IHAHFLRH L Q N IL H +SVC + NK+ YA  +F QS
Sbjct: 166 IERKILKLLHGHNTRTQLRQIHAHFLRHGLDQLNHILAHFISVCGSENKMPYANRVFLQS 225

Query: 282 QNPNIFLFNSII 247
            NPNI  FN+++
Sbjct: 226 VNPNILPFNAMV 237


>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  105 bits (262), Expect(2) = 2e-39
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = -3

Query: 459 ERRILRLLHGQKTRLRLREIHAHFLRHHLHQSNQILTHMVSVCAAANKVSYAYSLFQQSQ 280
           ERRILR LHG+KTR +L +IHAH LRHHLHQSNQIL+H +SVC A +K+ YA  +F Q+Q
Sbjct: 9   ERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQ 68

Query: 279 NPNIFLFNSII 247
           NPN+ LFNS+I
Sbjct: 69  NPNLLLFNSMI 79



 Score = 82.4 bits (202), Expect(2) = 2e-39
 Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
 Frame = -1

Query: 230 LFKACSNLLDVKLGQGVHGEIVVMGFDCFSKVAIGVVELYCKCGKMDDARKVFDYISKRD 51
           L K+CS + D ++G+GVHG ++V+GF+ FS + IG+++LY  CG+M+DA+KVFD +  RD
Sbjct: 113 LLKSCSGICDNRIGKGVHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRD 172

Query: 50  -----VIVWNLMVYG 21
                V+ WN M+ G
Sbjct: 173 MRDRSVVSWNSMIAG 187