BLASTX nr result

ID: Bupleurum21_contig00010095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010095
         (1793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   616   e-174
ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...   604   e-170
ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor ...   604   e-170
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...   598   e-168
gb|ACU19502.1| unknown [Glycine max]                                  595   e-167

>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
            gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 482

 Score =  616 bits (1589), Expect = e-174
 Identities = 310/461 (67%), Positives = 360/461 (78%), Gaps = 2/461 (0%)
 Frame = -2

Query: 1747 MKKRGRSITPNLETSAIVDVWKREVGQISNRTFAHRFAASEXXXXXXXXXXXXXXXXXXX 1568
            MKKR R+  P+    A+++VW+REVG++S R FAHR AASE                   
Sbjct: 1    MKKRART-NPD---KAVLNVWQREVGELSTRNFAHRLAASEDLV---------------- 40

Query: 1567 XXXXXXXXXXXXXXLRLDLHRKLEKHKGCVNTVSFSSDGDILVSGSDDRRVILWDWQFGQ 1388
                          LRLDL++KL+KH+GCVNTVSF+++GDILVSGSDDRRVILWDW+ G+
Sbjct: 41   --------------LRLDLYKKLDKHRGCVNTVSFNANGDILVSGSDDRRVILWDWESGR 86

Query: 1387 IKLSFHTGHHNNVFQAKIMPFSDDRSIVTCAADGQVRHAKILERGRVETKLLAKHGGRAH 1208
            IKLSFH+GH  NVFQAKIMP++DDRSIVTCAADGQVR A+ILE G VET LLAKH GRAH
Sbjct: 87   IKLSFHSGHTKNVFQAKIMPYTDDRSIVTCAADGQVRFAQILECGAVETTLLAKHQGRAH 146

Query: 1207 KLAVEPGSPHIFYTCGEDGLVQHFDLRTGAATELFTCQSVRDGP--MPIVRLNAIAIDPR 1034
            KLA+EPGSP+I YTCGEDGLVQHFDLRT  ATELF+C+ + D    MP+V LNAI IDPR
Sbjct: 147  KLAIEPGSPYILYTCGEDGLVQHFDLRTRRATELFSCRPIDDRREYMPVVHLNAITIDPR 206

Query: 1033 NPNLFAVAGSDEYTRLYDIRKYKWDGSSNFGQPADYFCPQHLIGDGRVGITGLAFSNQSE 854
            NPNLFAVAGSDEYTRLYDIR YKWDGS+ FGQP DYFCP HLIGD RVGITGL+FS+QSE
Sbjct: 207  NPNLFAVAGSDEYTRLYDIRMYKWDGSTEFGQPTDYFCPPHLIGDERVGITGLSFSDQSE 266

Query: 853  LLSTYNDEFIYLFTKDMGLGPNPDFSALKYMDSDADEVKSDHISAEXXXXXXXXXXXSPQ 674
            LL +YNDE IYLFT+DMGLGPNPD S+   + S A E+    +  +           SPQ
Sbjct: 267  LLVSYNDELIYLFTRDMGLGPNPDPSSPVSIGSSAGELACMDVDGK----------VSPQ 316

Query: 673  VYKGHRNRETVKGVNFYGPRCEYVVSGSDCGRIFIWRKKDGELLRVMEADKRVVNCIEPH 494
            VY+GH+N ETVKGV+F+GP CEYVVSGSDCGRIFIW+KK GEL+R MEADK VVNCIEPH
Sbjct: 317  VYEGHQNCETVKGVSFFGPGCEYVVSGSDCGRIFIWKKKGGELIRAMEADKHVVNCIEPH 376

Query: 493  PHTTVLASSGIDSDVKLWIPKAVERATLPTNIEKLRPKARG 371
            PH TVLASSGI++D+K+W PKA+ERATLPTNI +L+PKARG
Sbjct: 377  PHATVLASSGIENDIKMWTPKAIERATLPTNIGRLKPKARG 417


>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score =  604 bits (1558), Expect = e-170
 Identities = 303/447 (67%), Positives = 346/447 (77%), Gaps = 3/447 (0%)
 Frame = -2

Query: 1702 AIVDVWKREVGQISNRTFAHRFAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 1523
            AI D+  RE+G +  R FA R  ASE                                 L
Sbjct: 14   AIPDLCNRELGHLPPRNFALRLGASEDLV------------------------------L 43

Query: 1522 RLDLHRKLEKHKGCVNTVSFSSDGDILVSGSDDRRVILWDWQFGQIKLSFHTGHHNNVFQ 1343
            RL+L R L+KH+GCVNTVSF++DGD LVSGSDD  VILWDW+ G+IKLSFH+GH NNVFQ
Sbjct: 44   RLELLRNLQKHRGCVNTVSFNADGDTLVSGSDDWGVILWDWETGRIKLSFHSGHSNNVFQ 103

Query: 1342 AKIMPFSDDRSIVTCAADGQVRHAKILERGRVETKLLAKHGGRAHKLAVEPGSPHIFYTC 1163
            AK MP S DR+IVTCAADGQVRHA+ILE GRVETK LAKH GRAHKLAVEPGSPHIFYTC
Sbjct: 104  AKFMPHSHDRTIVTCAADGQVRHAQILENGRVETKCLAKHQGRAHKLAVEPGSPHIFYTC 163

Query: 1162 GEDGLVQHFDLRTGAATELFTCQSVRD--GPMPIVRLNAIAIDPRNPNLFAVAGSDEYTR 989
            GEDGLVQHFDLRTGAATELFTCQ ++D    MP++ LNAIAIDPRNPNLFAVAGSDEY R
Sbjct: 164  GEDGLVQHFDLRTGAATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYAR 223

Query: 988  LYDIRKYKWDGSSNFGQPADYFCPQHLIGDGRVGITGLAFSNQSELLSTYNDEFIYLFTK 809
            LYDIR+YKWDGS++FGQP D+FCP HLIGD +VGITGLAFS Q ELL +YNDE IYLFT+
Sbjct: 224  LYDIRRYKWDGSTDFGQPTDFFCPPHLIGDQQVGITGLAFSEQRELLVSYNDELIYLFTQ 283

Query: 808  DMGLGPN-PDFSALKYMDSDADEVKSDHISAEXXXXXXXXXXXSPQVYKGHRNRETVKGV 632
            DMGLGPN PD  + K M+SDA E+   H S             +PQV+KGHRN ETVKGV
Sbjct: 284  DMGLGPNPPDPGSPKSMNSDASEIGFSHGSVSSQSNMDADDKITPQVFKGHRNCETVKGV 343

Query: 631  NFYGPRCEYVVSGSDCGRIFIWRKKDGELLRVMEADKRVVNCIEPHPHTTVLASSGIDSD 452
            NF+GP+CEYVVSGSDCGRIFIW+KK G+L+RVMEADK VVNCIE HPHT VLASSGI++D
Sbjct: 344  NFFGPKCEYVVSGSDCGRIFIWKKKGGQLIRVMEADKHVVNCIESHPHTMVLASSGIEND 403

Query: 451  VKLWIPKAVERATLPTNIEKLRPKARG 371
            +K+W PKA+E+ATLP NIE+ +PKA+G
Sbjct: 404  IKIWTPKALEKATLPKNIEQ-KPKAKG 429


>ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 2 [Glycine
            max]
          Length = 490

 Score =  604 bits (1557), Expect = e-170
 Identities = 300/447 (67%), Positives = 346/447 (77%), Gaps = 3/447 (0%)
 Frame = -2

Query: 1702 AIVDVWKREVGQISNRTFAHRFAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 1523
            A+ D+  REVG +S R FA R  +SE                                 L
Sbjct: 6    ALPDLCNREVGHLSPRNFALRLGSSEDLV------------------------------L 35

Query: 1522 RLDLHRKLEKHKGCVNTVSFSSDGDILVSGSDDRRVILWDWQFGQIKLSFHTGHHNNVFQ 1343
            RL L R L+KH+GCVN VSF++DGDILVSGSDD  +ILWDW+ G+I+LSFH+GH NNVFQ
Sbjct: 36   RLQLLRNLQKHRGCVNAVSFNADGDILVSGSDDCGIILWDWETGRIRLSFHSGHSNNVFQ 95

Query: 1342 AKIMPFSDDRSIVTCAADGQVRHAKILERGRVETKLLAKHGGRAHKLAVEPGSPHIFYTC 1163
            AKIMP SDDR+IVTCAADGQVRHA++LE GRVETK LAKH GRAHKLA+EPGSPHIFYTC
Sbjct: 96   AKIMPHSDDRTIVTCAADGQVRHAQLLENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTC 155

Query: 1162 GEDGLVQHFDLRTGAATELFTCQSVRD--GPMPIVRLNAIAIDPRNPNLFAVAGSDEYTR 989
            GEDGLVQ FDLRTGAATELFTCQ ++D    MP++ LNAIAIDPRNPNLFAVAGSDEY R
Sbjct: 156  GEDGLVQRFDLRTGAATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYAR 215

Query: 988  LYDIRKYKWDGSSNFGQPADYFCPQHLIGDGRVGITGLAFSNQSELLSTYNDEFIYLFTK 809
            LYDIRKYKWDGS++FGQP ++FCP HLIGD +VGITGLAFS   ELL +YNDE IYLFT+
Sbjct: 216  LYDIRKYKWDGSTDFGQPTNFFCPPHLIGDQQVGITGLAFSELRELLVSYNDELIYLFTQ 275

Query: 808  DMGLGPN-PDFSALKYMDSDADEVKSDHISAEXXXXXXXXXXXSPQVYKGHRNRETVKGV 632
            DMGLGPN PD  + K M+SDA E+   H S             +PQV+KGHRN ETVKGV
Sbjct: 276  DMGLGPNPPDPVSPKSMNSDASEIGFSHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGV 335

Query: 631  NFYGPRCEYVVSGSDCGRIFIWRKKDGELLRVMEADKRVVNCIEPHPHTTVLASSGIDSD 452
            NF+GP+CEYVVSGSDCGRIFIW+KK G+L+RVMEADK VVNCIE HPHT VLASSGI+ D
Sbjct: 336  NFFGPKCEYVVSGSDCGRIFIWKKKSGQLIRVMEADKYVVNCIESHPHTMVLASSGIEHD 395

Query: 451  VKLWIPKAVERATLPTNIEKLRPKARG 371
            +K+W PKA+E+ATLP NIE+L+PKA+G
Sbjct: 396  IKIWTPKALEKATLPKNIEQLKPKAKG 422


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1 [Glycine
            max]
          Length = 489

 Score =  598 bits (1541), Expect = e-168
 Identities = 299/447 (66%), Positives = 345/447 (77%), Gaps = 3/447 (0%)
 Frame = -2

Query: 1702 AIVDVWKREVGQISNRTFAHRFAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 1523
            A+ D+  REVG +S R FA R  +SE                                 L
Sbjct: 6    ALPDLCNREVGHLSPRNFALRLGSSEDLV------------------------------L 35

Query: 1522 RLDLHRKLEKHKGCVNTVSFSSDGDILVSGSDDRRVILWDWQFGQIKLSFHTGHHNNVFQ 1343
            RL L R L+KH+GCVN VSF++DGDILVSGSDD  +ILWDW+ G+I+LSFH+GH NNVFQ
Sbjct: 36   RLQLLRNLQKHRGCVNAVSFNADGDILVSGSDDCGIILWDWETGRIRLSFHSGHSNNVFQ 95

Query: 1342 AKIMPFSDDRSIVTCAADGQVRHAKILERGRVETKLLAKHGGRAHKLAVEPGSPHIFYTC 1163
            AKIMP SDDR+IVTCAADGQVRHA++LE GRVETK LAKH GRAHKLA+EPGSPHIFYTC
Sbjct: 96   AKIMPHSDDRTIVTCAADGQVRHAQLLENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTC 155

Query: 1162 GEDGLVQHFDLRTGAATELFTCQSVRD--GPMPIVRLNAIAIDPRNPNLFAVAGSDEYTR 989
            GEDGLVQ FDLRTGAATELFTCQ ++D    MP++ LNAIAIDPRNPNLFAVAGSDEY R
Sbjct: 156  GEDGLVQRFDLRTGAATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYAR 215

Query: 988  LYDIRKYKWDGSSNFGQPADYFCPQHLIGDGRVGITGLAFSNQSELLSTYNDEFIYLFTK 809
            LYDIRKYKWDGS++FGQP ++FCP HLIGD +VGITGLAFS   ELL +YNDE IYLFT+
Sbjct: 216  LYDIRKYKWDGSTDFGQPTNFFCPPHLIGDQQVGITGLAFSELRELLVSYNDELIYLFTQ 275

Query: 808  DMGLGPN-PDFSALKYMDSDADEVKSDHISAEXXXXXXXXXXXSPQVYKGHRNRETVKGV 632
            DMGLGPN PD  + K M+SDA E+   H S             +PQV+KGHRN ETVKGV
Sbjct: 276  DMGLGPNPPDPVSPKSMNSDASEIGFSHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGV 335

Query: 631  NFYGPRCEYVVSGSDCGRIFIWRKKDGELLRVMEADKRVVNCIEPHPHTTVLASSGIDSD 452
            NF+GP+CEYVVSGSDCGRIFIW+KK G+L+RVMEADK VVNCIE HPHT VLASSGI+ D
Sbjct: 336  NFFGPKCEYVVSGSDCGRIFIWKKKSGQLIRVMEADKYVVNCIESHPHTMVLASSGIEHD 395

Query: 451  VKLWIPKAVERATLPTNIEKLRPKARG 371
            +K+W PKA+E+ATLP NIE+ +PKA+G
Sbjct: 396  IKIWTPKALEKATLPKNIEQ-KPKAKG 421


>gb|ACU19502.1| unknown [Glycine max]
          Length = 489

 Score =  595 bits (1535), Expect = e-167
 Identities = 299/447 (66%), Positives = 344/447 (76%), Gaps = 3/447 (0%)
 Frame = -2

Query: 1702 AIVDVWKREVGQISNRTFAHRFAASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 1523
            A+ D+  REVG +S R FA R  +SE                                 L
Sbjct: 6    ALPDLCNREVGHLSPRNFALRLDSSEDLV------------------------------L 35

Query: 1522 RLDLHRKLEKHKGCVNTVSFSSDGDILVSGSDDRRVILWDWQFGQIKLSFHTGHHNNVFQ 1343
            RL L R L+KH+GCVN VSF++DGDILVSGSDD  +ILWDW+ G+I+LSFH+GH NNVFQ
Sbjct: 36   RLQLLRNLQKHRGCVNAVSFNADGDILVSGSDDCGIILWDWETGRIRLSFHSGHSNNVFQ 95

Query: 1342 AKIMPFSDDRSIVTCAADGQVRHAKILERGRVETKLLAKHGGRAHKLAVEPGSPHIFYTC 1163
            AKIMP SDDR+IVTCAADGQVRHA++LE GRVETK LAKH GRAHKLA+EPGSPHIFYTC
Sbjct: 96   AKIMPHSDDRTIVTCAADGQVRHAQLLENGRVETKCLAKHQGRAHKLAIEPGSPHIFYTC 155

Query: 1162 GEDGLVQHFDLRTGAATELFTCQSVRD--GPMPIVRLNAIAIDPRNPNLFAVAGSDEYTR 989
            GEDGLVQ FDLRTGAATELFTCQ ++D    MP++ LNAIAIDPRNPNLFAVAGSDEY R
Sbjct: 156  GEDGLVQRFDLRTGAATELFTCQPIKDRWSYMPVIHLNAIAIDPRNPNLFAVAGSDEYAR 215

Query: 988  LYDIRKYKWDGSSNFGQPADYFCPQHLIGDGRVGITGLAFSNQSELLSTYNDEFIYLFTK 809
            LYDIRKYKWDGS+ FGQP ++FCP HLIGD +VGITGLAFS   ELL +YNDE IYLFT+
Sbjct: 216  LYDIRKYKWDGSTGFGQPTNFFCPPHLIGDQQVGITGLAFSELRELLVSYNDELIYLFTQ 275

Query: 808  DMGLGPN-PDFSALKYMDSDADEVKSDHISAEXXXXXXXXXXXSPQVYKGHRNRETVKGV 632
            DMGLGPN PD  + K M+SDA E+   H S             +PQV+KGHRN ETVKGV
Sbjct: 276  DMGLGPNPPDPVSPKSMNSDASEIGFSHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGV 335

Query: 631  NFYGPRCEYVVSGSDCGRIFIWRKKDGELLRVMEADKRVVNCIEPHPHTTVLASSGIDSD 452
            NF+GP+CEYVVSGSDCGRIFIW+KK G+L+RVMEADK VVNCIE HPHT VLASSGI+ D
Sbjct: 336  NFFGPKCEYVVSGSDCGRIFIWKKKSGQLIRVMEADKYVVNCIEFHPHTMVLASSGIEHD 395

Query: 451  VKLWIPKAVERATLPTNIEKLRPKARG 371
            +K+W PKA+E+ATLP NIE+ +PKA+G
Sbjct: 396  IKIWTPKALEKATLPKNIEQ-KPKAKG 421


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