BLASTX nr result

ID: Bupleurum21_contig00010092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010092
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    75   9e-12
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002326601.1| predicted protein [Populus trichocarpa] gi|2...    58   8e-07

>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
 Frame = -1

Query: 547 DSFKEIDAPDYAQPS-SNCLAVYDDSLAFMSLHETEMNFDMWTWSDGCWTKKFTVGPLPD 371
           D+F+EI  PDY +P+ S  L +Y DS+AF ++H  E   D+W  ++GCW ++F   PL +
Sbjct: 235 DAFQEIQEPDYDKPAYSTRLILYHDSIAFSTVHNVEKFLDIWVLNEGCWIRQFKSRPLLE 294

Query: 370 VWRPVGHWK-GNRXXXXXXXXXXLFDPETQETKDLAF 263
           +  PV HWK GN           L+D   QE KDL F
Sbjct: 295 LRNPVAHWKNGNVILDSDNDQLMLYDTNKQELKDLRF 331


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = -1

Query: 547 DSFKEIDAPDYAQPSS-NCLAVYDDSLAFMSLHETEMNFDMWTWSDGCWTKKFTVGPLPD 371
           ++ +EI  PD  +  +  CLA Y DSLA + +HE  ++  MWT ++ CW K F++GPLP+
Sbjct: 282 ETCQEIQLPDCGKSHNCQCLATYQDSLAILDVHEKFLH--MWTLNERCWVKNFSIGPLPE 339

Query: 370 VWRPVGHWKGNRXXXXXXXXXXLF-DPETQETKDL 269
           +  P+GHWK ++          +  DP TQE   L
Sbjct: 340 ISYPIGHWKNSKLILVSDSGELILCDPSTQEISGL 374


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = -1

Query: 538 KEIDAPDYAQP-SSNCLAVYDDSLAFMSLHETEMNFDMWTWSDGCWTKKFTVGPLPDVWR 362
           +EI  PDY +  +S  LAVY+DS+A + + E+ ++  +WT  + CWTKKF VGPL  V  
Sbjct: 286 QEIQLPDYDKSINSESLAVYNDSIALLVVQESVLH--VWTLDERCWTKKFVVGPLLGVQY 343

Query: 361 PVGHWKGNRXXXXXXXXXXLF-DPETQETKDLAF 263
           PVGHW+ N           L  DP TQE   L F
Sbjct: 344 PVGHWQNNTIILISDSYELLLCDPRTQEMSGLGF 377


>ref|XP_002326601.1| predicted protein [Populus trichocarpa] gi|222833923|gb|EEE72400.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -1

Query: 526 APDYAQPSSNCLAVYDDSLAFMSLHETEMNFDMWTWSDGCWTKK 395
           APDY  P+S  L +YDDS+A  ++HE E   D+WT ++ CWTKK
Sbjct: 56  APDYCDPASGRLVLYDDSIALFNVHEIEKFLDIWTLNERCWTKK 99


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