BLASTX nr result

ID: Bupleurum21_contig00010078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010078
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265...   188   7e-46
emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]   188   7e-46
ref|XP_002523138.1| conserved hypothetical protein [Ricinus comm...   168   8e-40
ref|XP_004136161.1| PREDICTED: uncharacterized protein LOC101220...   163   3e-38
emb|CBI36907.3| unnamed protein product [Vitis vinifera]              147   1e-33

>ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265757 [Vitis vinifera]
          Length = 533

 Score =  188 bits (478), Expect = 7e-46
 Identities = 102/189 (53%), Positives = 133/189 (70%), Gaps = 5/189 (2%)
 Frame = -1

Query: 684 HTDARQYMTRPVPYYKDLCFICRDINSDEKENLSGHDLHQQEEFHEVRYDKLLKGPVPSE 505
           HT+ARQYMTRPVPYY+DLC ICR+++ D ++   G+D  + ++  EV++  +LK      
Sbjct: 346 HTNARQYMTRPVPYYQDLCVICRELSIDGRDTDLGYD--EPDDIPEVKFQGVLKISESPA 403

Query: 504 TSISNGNFIGELQESSHVA---NKHQLDNPSSSSQSKKARNNDEGMAGALREMATAVSSL 334
            S S+   +GEL+ESSH     NK QL+NPS+S+  K+ R  D  MA ALREM TAVSS+
Sbjct: 404 ASFSSEEQLGELKESSHSGLRRNKRQLENPSNSATPKRIRKKDGNMASALREMVTAVSSI 463

Query: 333 ADMRKEEDDS--VPIEIVIEAIQALPDMDEELVLDACDYLEDEKKAKTFLALDVXXXXXX 160
           ++  K++++S  + IE VIEA+QALPDMDEELVLDACD+LEDEKKAKTFLALDV      
Sbjct: 464 SEKNKDDENSGSISIESVIEAVQALPDMDEELVLDACDFLEDEKKAKTFLALDVKLRKKW 523

Query: 159 XXXXXRPQQ 133
                RPQQ
Sbjct: 524 LIRKLRPQQ 532


>emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]
          Length = 975

 Score =  188 bits (478), Expect = 7e-46
 Identities = 102/189 (53%), Positives = 133/189 (70%), Gaps = 5/189 (2%)
 Frame = -1

Query: 684  HTDARQYMTRPVPYYKDLCFICRDINSDEKENLSGHDLHQQEEFHEVRYDKLLKGPVPSE 505
            HT+ARQYMTRPVPYY+DLC ICR+++ D ++   G+D  + ++  EV++  +LK      
Sbjct: 788  HTNARQYMTRPVPYYQDLCVICRELSIDGRDTDLGYD--EPDDIPEVKFQGVLKISESPA 845

Query: 504  TSISNGNFIGELQESSHVA---NKHQLDNPSSSSQSKKARNNDEGMAGALREMATAVSSL 334
             S S+   +GEL+ESSH     NK QL+NPS+S+  K+ R  D  MA ALREM TAVSS+
Sbjct: 846  ASFSSEEQLGELKESSHSGLRRNKRQLENPSNSATPKRIRKKDGNMASALREMVTAVSSI 905

Query: 333  ADMRKEEDDS--VPIEIVIEAIQALPDMDEELVLDACDYLEDEKKAKTFLALDVXXXXXX 160
            ++  K++++S  + IE VIEA+QALPDMDEELVLDACD+LEDEKKAKTFLALDV      
Sbjct: 906  SEKNKDDENSGSISIESVIEAVQALPDMDEELVLDACDFLEDEKKAKTFLALDVKLRKKW 965

Query: 159  XXXXXRPQQ 133
                 RPQQ
Sbjct: 966  LIRKLRPQQ 974


>ref|XP_002523138.1| conserved hypothetical protein [Ricinus communis]
           gi|223537700|gb|EEF39323.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 466

 Score =  168 bits (426), Expect = 8e-40
 Identities = 96/184 (52%), Positives = 121/184 (65%), Gaps = 16/184 (8%)
 Frame = -1

Query: 681 TDARQYMTRPVPYYKDLCFICRDINSDEKENLSGHDLHQQEEFHEVRYDKLLKGPVPSET 502
           TDARQ+MTRPVPYYKDLC IC D N DE +  S   L  Q +F +V      K P PS+ 
Sbjct: 274 TDARQFMTRPVPYYKDLCMICNDQNFDESDCCSAQYLELQNDFQDV------KAPRPSQC 327

Query: 501 ------SISNGNFIGELQESSHVANK---------HQLDNPSSSSQSKKARNNDEGMAGA 367
                 S+S    IG++ ES    +K          Q +N S+S   KKAR  +EGMA A
Sbjct: 328 FHSPALSVSTEEEIGDMLESVDTGSKTSVLNENKKRQSENQSNSGHFKKARGKEEGMANA 387

Query: 366 LREMATAVSSLADMRKEED-DSVPIEIVIEAIQALPDMDEELVLDACDYLEDEKKAKTFL 190
           LREMATAVSSL+D RK+E+ +S+ IE V++A+Q L DMDE+L+LDACD+LEDE KAKTF+
Sbjct: 388 LREMATAVSSLSDKRKDENTNSISIENVVKAVQDLSDMDEDLILDACDFLEDEMKAKTFM 447

Query: 189 ALDV 178
           AL+V
Sbjct: 448 ALEV 451


>ref|XP_004136161.1| PREDICTED: uncharacterized protein LOC101220968 [Cucumis sativus]
           gi|449505362|ref|XP_004162446.1| PREDICTED:
           uncharacterized protein LOC101224559 [Cucumis sativus]
          Length = 553

 Score =  163 bits (412), Expect = 3e-38
 Identities = 91/173 (52%), Positives = 120/173 (69%), Gaps = 4/173 (2%)
 Frame = -1

Query: 684 HTDARQYMTRPVPYYKDLCFICRDINSDEKENLSGHDLHQQEEFHEVRYDKLLKGPVPSE 505
           HTDARQ+MTRPVPYYKDLC IC D +  E++ LSG  + Q  +  + +     + PV S 
Sbjct: 371 HTDARQFMTRPVPYYKDLCVIC-DPSYGERDCLSGQGIEQHHDAEDEKLSNGFQSPV-SP 428

Query: 504 TSISNGNFIGELQESSHVA--NKHQLDNPSSSSQSKKARNNDEGMAGALREMATAVSSLA 331
            S+        ++ES+H+   NK +L++ SS   +KK R  DE MA ALREM + VSSL+
Sbjct: 429 VSVEEQ---ASVKESTHLGSKNKRELESMSSFDYNKKLRGEDESMASALREMVSVVSSLS 485

Query: 330 DMRKEEDDS--VPIEIVIEAIQALPDMDEELVLDACDYLEDEKKAKTFLALDV 178
           D +K +D+S  + IE VIEAIQ+LP+MDE+LVLDACD LEDE+KAKTF+ALDV
Sbjct: 486 DKKKNDDNSSSISIERVIEAIQSLPNMDEDLVLDACDLLEDERKAKTFIALDV 538


>emb|CBI36907.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  147 bits (372), Expect = 1e-33
 Identities = 86/186 (46%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
 Frame = -1

Query: 684 HTDARQYMTRPVPYYKDLCFICRDINSDEKENLSGHDLHQQEEFHEVRYDKLLKGPVPSE 505
           HT+ARQYMTRPVPYY+DLC ICR+++ D ++   G+D  + ++  EV++  +LK      
Sbjct: 252 HTNARQYMTRPVPYYQDLCVICRELSIDGRDTDLGYD--EPDDIPEVKFQGVLKISESPA 309

Query: 504 TSISNGNFIGELQESSHVANKHQLDNPSSSSQSKKARNNDEGMAGALREMATAVSSLADM 325
            S S+   +GEL+ESSH                               EM TAVSS+++ 
Sbjct: 310 ASFSSEEQLGELKESSHSG-----------------------------EMVTAVSSISEK 340

Query: 324 RKEEDDS--VPIEIVIEAIQALPDMDEELVLDACDYLEDEKKAKTFLALDVXXXXXXXXX 151
            K++++S  + IE VIEA+QALPDMDEELVLDACD+LEDEKKAKTFLALDV         
Sbjct: 341 NKDDENSGSISIESVIEAVQALPDMDEELVLDACDFLEDEKKAKTFLALDVKLRKKWLIR 400

Query: 150 XXRPQQ 133
             RPQQ
Sbjct: 401 KLRPQQ 406


Top