BLASTX nr result

ID: Bupleurum21_contig00010076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010076
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002516769.1| ATP binding protein, putative [Ricinus commu...    80   1e-13
emb|CBI26227.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    73   2e-11

>ref|XP_002315782.1| predicted protein [Populus trichocarpa] gi|222864822|gb|EEF01953.1|
           predicted protein [Populus trichocarpa]
          Length = 1202

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 12/126 (9%)
 Frame = -3

Query: 387 YQHRKIFPAGTAAKVFKAA--------SVSPWKATDEMIGVSVPRKARTAS-KRSHDHIS 235
           + HRK FP    AKVF+AA        +V+PWKATDEMIGVSVPRKAR+AS KRSH+  +
Sbjct: 149 HHHRKSFPP--QAKVFRAAPTMTNTTAAVTPWKATDEMIGVSVPRKARSASTKRSHECWT 206

Query: 234 XXXXXXGEPMINGQSSTSPVRQGG---FLSSTPSPAIGRDAXXXXXXXSNASIRKKIKPS 64
                  E  I+ Q+S SPVR  G     S++ SPA    A       SNAS++KK+KP+
Sbjct: 207 SSGGVGSE-QIHRQASISPVRSSGPAMLASASASPA----APVSPPSSSNASVKKKMKPN 261

Query: 63  GAKPRP 46
           G K RP
Sbjct: 262 GPKQRP 267


>ref|XP_002311616.1| predicted protein [Populus trichocarpa] gi|222851436|gb|EEE88983.1|
           predicted protein [Populus trichocarpa]
          Length = 1518

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 59/126 (46%), Positives = 73/126 (57%), Gaps = 12/126 (9%)
 Frame = -3

Query: 387 YQHRKIFPAGTAAKVFKAA--------SVSPWKATDEMIGVSVPRKARTAS-KRSHDHIS 235
           + HRK FP    AKVF+ A        +V+PWKA DEMIGVSVPRKAR+AS KRSH+   
Sbjct: 57  HHHRKSFPP--PAKVFRTAPTTINTTAAVTPWKAPDEMIGVSVPRKARSASTKRSHECWV 114

Query: 234 XXXXXXGEPMINGQSSTSPVRQGG---FLSSTPSPAIGRDAXXXXXXXSNASIRKKIKPS 64
                 G    + Q+STSPVR  G     S + SPA    A       SNAS++KK+KP+
Sbjct: 115 SSGGGVGSEQTHRQASTSPVRSSGPAMLASISASPA----APASPPSSSNASVKKKMKPN 170

Query: 63  GAKPRP 46
           G K +P
Sbjct: 171 GPKQKP 176


>ref|XP_002516769.1| ATP binding protein, putative [Ricinus communis]
           gi|223543857|gb|EEF45383.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1613

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 58/127 (45%), Positives = 72/127 (56%), Gaps = 13/127 (10%)
 Frame = -3

Query: 387 YQHRKIFPAGTAAKVFK---------AASVSPWKATDEMIGVSVPRKARTAS-KRSHDHI 238
           + HRK FP    AKVF+          A+ +PWKA DEMIGVSVPRKAR+AS KRSH+  
Sbjct: 154 HHHRKSFPP--PAKVFRPSQQPVTTTTATTTPWKAPDEMIGVSVPRKARSASTKRSHEWA 211

Query: 237 SXXXXXXGEPMINGQSSTSPVRQGG---FLSSTPSPAIGRDAXXXXXXXSNASIRKKIKP 67
           S      G   I+ Q+STSPVR  G     S++ SP     A        NAS++KK+ P
Sbjct: 212 SSCGVGGGGEQIHRQASTSPVRSSGPAMLASASASP-----APVSPPSSCNASVKKKM-P 265

Query: 66  SGAKPRP 46
           +G K RP
Sbjct: 266 NGPKQRP 272


>emb|CBI26227.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 54/115 (46%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = -3

Query: 387 YQHRKIFPAGTAAKVFKAASVSPWKATDEMIGVSVPRKARTAS-KRSHDHISXXXXXXGE 211
           +QHRK +P    AKV +A  V  WKA DEMIGVSVPRKAR+AS KRSH+  +        
Sbjct: 126 HQHRKSYPP---AKVVRAPPV--WKAADEMIGVSVPRKARSASTKRSHECWASGVGGVPG 180

Query: 210 PMINGQSSTSPVRQGGFLSSTPSPAIGRDAXXXXXXXSNASIRKKIKPSGAKPRP 46
             I+ Q+STSPVR      +  + A+           SN SIRKK+KP+G K RP
Sbjct: 181 EQIHRQASTSPVRPN---LAASTAAVAASPASISPSSSNVSIRKKMKPNGPKLRP 232


>ref|XP_002277982.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1587

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
 Frame = -3

Query: 387 YQHRKIFPAGTAAKVFKAASVSPWKATDEMIGVSVPRKARTAS-KRSHDHISXXXXXXGE 211
           +QHRK +P    AKV +A  V  WKA DEMIGVSVPRKAR+AS KRSH+  +        
Sbjct: 126 HQHRKSYPP---AKVVRAPPV--WKAADEMIGVSVPRKARSASTKRSHECWASGVGGVPG 180

Query: 210 PMINGQSSTSPVRQGGFLSSTPSPAIGRDAXXXXXXXSNASIRKKIKPSGAKPRP 46
             I+ Q+STSPVR      +  + A+           SN SIRKK+ P+G K RP
Sbjct: 181 EQIHRQASTSPVRPN---LAASTAAVAASPASISPSSSNVSIRKKM-PNGPKLRP 231


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