BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010075
         (1559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...   248   4e-63
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   234   5e-59
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   234   6e-59
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   227   6e-57
ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|2...   214   7e-53

>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Vitis vinifera]
          Length = 673

 Score =  248 bits (632), Expect = 4e-63
 Identities = 147/319 (46%), Positives = 160/319 (50%), Gaps = 8/319 (2%)
 Frame = +2

Query: 497  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXXXXGV 676
            HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM ISL            GV
Sbjct: 350  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGV 409

Query: 677  NPEDGTENQDIVPFXXXXXXXXXXXXXXXXXXFSQGFPMATQXXXXXXXMMWPPHMPLAR 856
            NP++G EN DIVPF                  F Q    A Q       +MWPPHMPLAR
Sbjct: 410  NPDNGGENPDIVPF-EDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMPLAR 468

Query: 857  GARPMPGMRGFPPAMMGPEGFPYGPLGPDGFPMPDLFNMXXXXXXXXXXXXXXDFAGP-G 1033
            GARP+P MRGFPP MMG +GF Y  + PDGF MPD+F +              DF GP  
Sbjct: 469  GARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDFTGPAS 528

Query: 1034 GMMFQGR-------PSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXX 1192
            GMMF GR       P+                                            
Sbjct: 529  GMMFPGRGQPGAVFPASGYGMMMGPGRAPFMGGMGVPAAAPTRAGRPVGMPPMFPPPPPP 588

Query: 1193 XXXXNANRGKRDQKATTNDRNDRYSAGSDQXXXXXXXXXXXXQDDEAQYQQGKNPQHEDQ 1372
                N  +  RDQ+   NDRNDRYS GSDQ             DDE QY QG   Q +DQ
Sbjct: 589  NSQNNRTK--RDQRTPVNDRNDRYSGGSDQ----GRGQDMAGPDDETQYLQGLKSQQDDQ 642

Query: 1373 IGAGNSLKNDESGSEDEAP 1429
             G GNS +NDES SEDEAP
Sbjct: 643  FGGGNSFRNDESESEDEAP 661



 Score =  199 bits (506), Expect = 2e-48
 Identities = 94/105 (89%), Positives = 100/105 (95%)
 Frame = +1

Query: 58  NLPNGQQSQASRSAIPLPQGISRYFIVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 237
           NLPNG  +QA+++A PLPQGISRYFIVKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 226 NLPNGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 285

Query: 238 VDNVILIFSVNRTRHFQGCAKMTSRIGGSVGGGNWKYAHGTAHYG 372
           V+NVILIFSVNRTRHFQGCAKMTS+IGG VGGGNWKYAHGTAHYG
Sbjct: 286 VENVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYG 330


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 691

 Score =  234 bits (597), Expect = 5e-59
 Identities = 148/321 (46%), Positives = 165/321 (51%), Gaps = 10/321 (3%)
 Frame = +2

Query: 497  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXXXXGV 676
            HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM IS+            GV
Sbjct: 362  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGV 421

Query: 677  NPEDGTENQDIVPFXXXXXXXXXXXXXXXXXXFSQGFPMATQXXXXXXXMMWPPHMPLAR 856
            NP++G EN DIVPF                  FS G   A Q       MMWPPHMPL R
Sbjct: 422  NPDNGGENPDIVPF-EDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHMPLGR 480

Query: 857  GARPMPGMRGFPPAMMGPEGF---PYGPLGPDGFPMPDLFNMXXXXXXXXXXXXXXDFAG 1027
            GARPMPGM+GF P MMG +G    P GP+GPDGF MPDLF +              DF G
Sbjct: 481  GARPMPGMQGFNPVMMG-DGLSYGPVGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGG 539

Query: 1028 -PGGMMFQGRPSQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXX 1189
             P  MMF+GRPSQ                                               
Sbjct: 540  PPAAMMFRGRPSQPGMFPSGGFGMMMNPGRGPFMGGMGVGGANPPRGGRPVNMPPMFPPP 599

Query: 1190 XXXXXNANR-GKRDQKATTNDRNDRYSAGSDQXXXXXXXXXXXXQDDEAQYQQGKNPQHE 1366
                 NANR  KRDQ+  T DRNDR+ +GS+Q             DD+AQYQQG     +
Sbjct: 600  PPLPQNANRAAKRDQR--TADRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKGNQD 657

Query: 1367 DQIGAGNSLKNDESGSEDEAP 1429
            D   A N+ +ND+S SEDEAP
Sbjct: 658  DH-PAVNNFRNDDSESEDEAP 677



 Score =  199 bits (505), Expect = 2e-48
 Identities = 93/105 (88%), Positives = 100/105 (95%)
 Frame = +1

Query: 58  NLPNGQQSQASRSAIPLPQGISRYFIVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 237
           N+ NGQ +QA+R+A PLPQGISRYFIVKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 238 NVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 297

Query: 238 VDNVILIFSVNRTRHFQGCAKMTSRIGGSVGGGNWKYAHGTAHYG 372
           V+NVIL+FSVNRTRHFQGCAKMTSRIGGSV GGNWKYAHGTAHYG
Sbjct: 298 VENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYG 342


>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
            gi|223537608|gb|EEF39232.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 702

 Score =  234 bits (596), Expect = 6e-59
 Identities = 150/339 (44%), Positives = 165/339 (48%), Gaps = 5/339 (1%)
 Frame = +2

Query: 497  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXXXXGV 676
            HLRNPYNENLPVKISRDCQELEPS+G QLA LLY EPDSELM ISL            GV
Sbjct: 372  HLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKREEEKAKGV 431

Query: 677  NPEDGTENQDIVPFXXXXXXXXXXXXXXXXXXFSQGFPMATQXXXXXXXMMWPPHMPLAR 856
            NPE+G +N DIVPF                  F Q      Q       ++W PHMPLAR
Sbjct: 432  NPENGGDNPDIVPF-EDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGIIW-PHMPLAR 489

Query: 857  GARPMPGMRGFPPAMMGPEGFPYGPLGPDGFPMPDLFNMXXXXXXXXXXXXXXDFAG-PG 1033
            GARP+PGMRGFPP MMG + F YGP+ PDGF MPDLF +              DF G   
Sbjct: 490  GARPIPGMRGFPPMMMGADSFSYGPVTPDGFGMPDLFGVAPRGFTPYAPRFSGDFTGAAS 549

Query: 1034 GMMFQGRPSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXNAN 1213
            GMMF GRP Q                                                 +
Sbjct: 550  GMMFPGRPPQPGGVFPNGGFGMMMGPGRAPFMGGMGPNSTNPLRGNWPGGMPFPPLPTPS 609

Query: 1214 RGK---RDQKATTNDRNDRYSAGSDQXXXXXXXXXXXXQDDEAQYQQ-GKNPQHEDQIGA 1381
              +   RDQ+ T    NDRYS GSDQ             DDEA+YQQ G    HEDQ GA
Sbjct: 610  PQRPVKRDQRMTA---NDRYSTGSDQ-----GRNTAGEPDDEARYQQEGLKASHEDQFGA 661

Query: 1382 GNSLKNDESGSEDEAPXXXXXXXXXXXXQSSELDATTGS 1498
            GNS +NDES SEDEAP            + SE DAT GS
Sbjct: 662  GNSFRNDESESEDEAPRRSRHGEGKKKRRGSEGDATPGS 700



 Score =  204 bits (518), Expect = 7e-50
 Identities = 96/105 (91%), Positives = 101/105 (96%)
 Frame = +1

Query: 58  NLPNGQQSQASRSAIPLPQGISRYFIVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 237
           NLPNGQ +QA+R+AIPLPQGISRYFIVKSCNREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 248 NLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 307

Query: 238 VDNVILIFSVNRTRHFQGCAKMTSRIGGSVGGGNWKYAHGTAHYG 372
            +NVILIFSVNRTRHFQGCAKMTS+IG SVGGGNWKYAHGTAHYG
Sbjct: 308 AENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYG 352


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
            CPSF30-like [Glycine max]
          Length = 681

 Score =  227 bits (579), Expect = 6e-57
 Identities = 143/318 (44%), Positives = 158/318 (49%), Gaps = 7/318 (2%)
 Frame = +2

Query: 497  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXXXXGV 676
            HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM IS+            GV
Sbjct: 362  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGV 421

Query: 677  NPEDGTENQDIVPFXXXXXXXXXXXXXXXXXXFSQGFPMATQXXXXXXXMMWPPHMPLAR 856
            NP++G EN DIVPF                  F  G   A Q       MMWPPHMPL R
Sbjct: 422  NPDNGGENPDIVPF-EDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHMPLGR 480

Query: 857  GARPMPGMRGFPPAMMGPEGFPYGPLGPDGFPMPDLFNMXXXXXXXXXXXXXXDFAG-PG 1033
            GARPMPGM+GF P MMG +G  YGP+GPDGF MPDLF +              DF G P 
Sbjct: 481  GARPMPGMQGFNPVMMG-DGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGGPPA 539

Query: 1034 GMMFQGRPSQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXX 1198
             MMF+GRPSQ                                                  
Sbjct: 540  AMMFRGRPSQPGMFPGGGFGMMLNPGRGPFMGGIGVGGANPPRGGRPVNMPPMFPPPPPL 599

Query: 1199 XXNANR-GKRDQKATTNDRNDRYSAGSDQXXXXXXXXXXXXQDDEAQYQQGKNPQHEDQI 1375
              NANR  KRDQ+  T DRNDR+ +GS+Q             DD+ QYQQG     +D  
Sbjct: 600  PQNANRAAKRDQR--TADRNDRFGSGSEQGKSQDMLSQSGGPDDDPQYQQGYKGNQDDH- 656

Query: 1376 GAGNSLKNDESGSEDEAP 1429
                    D+S SEDEAP
Sbjct: 657  -------PDDSESEDEAP 667



 Score =  198 bits (503), Expect = 4e-48
 Identities = 93/105 (88%), Positives = 100/105 (95%)
 Frame = +1

Query: 58  NLPNGQQSQASRSAIPLPQGISRYFIVKSCNRENFELSVQQGVWATQRSNEAKLNEAFDS 237
           N+ NGQ +QA+R+A PLPQGISRYFIVKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 238 NVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDS 297

Query: 238 VDNVILIFSVNRTRHFQGCAKMTSRIGGSVGGGNWKYAHGTAHYG 372
           V+NVILIFSVNRTRHFQGCAKMTS+IGGSV GGNWKYAHGTAHYG
Sbjct: 298 VENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYG 342


>ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|222847591|gb|EEE85138.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score =  214 bits (544), Expect = 7e-53
 Identities = 138/340 (40%), Positives = 154/340 (45%), Gaps = 6/340 (1%)
 Frame = +2

Query: 497  HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMEISLXXXXXXXXXXXXGV 676
            HLRNP+NENLPVKISRDCQELEPSIGEQLASLLYLEPDSELM +SL            GV
Sbjct: 363  HLRNPFNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSLAAEAKREEEKEKGV 422

Query: 677  NPEDGTENQDIVPFXXXXXXXXXXXXXXXXXXFSQGFPMATQXXXXXXXMMWPPHMPLAR 856
            NP+ G EN DIVPF                  F Q    A Q       MMWP H P+AR
Sbjct: 423  NPDSGGENPDIVPF-EDNEEEEEEESEEEEESFGQPLGPAAQGRGRGRGMMWPSHNPMAR 481

Query: 857  GARPMPGMRGFPPAMMGPEGFPYGPLGPDGFPMPDLFNMXXXXXXXXXXXXXXDFAG-PG 1033
            GARP+PG+RGFPP MMG +GF YG + PD F MPDLF +              DF G   
Sbjct: 482  GARPIPGIRGFPPMMMGADGFSYGAVTPDSFGMPDLFGVASRGFPPYGPRFSGDFTGAAS 541

Query: 1034 GMMFQGRPSQ-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXX 1198
            GMMF GRPSQ                                                  
Sbjct: 542  GMMFPGRPSQPGAVFPAGGFGMMMGPGRPPFIGGMGPTPSNLLRGPRPGGMFSPFPAPSS 601

Query: 1199 XXNANRGKRDQKATTNDRNDRYSAGSDQXXXXXXXXXXXXQDDEAQYQQGKNPQHEDQIG 1378
              N+   KRDQ+A  NDRNDR+                                  +Q G
Sbjct: 602  QNNSRSVKRDQRAAANDRNDRH----------------------------------NQFG 627

Query: 1379 AGNSLKNDESGSEDEAPXXXXXXXXXXXXQSSELDATTGS 1498
            A NS++NDES SEDEAP            + S  DAT GS
Sbjct: 628  AVNSIRNDESESEDEAPRRSRHGEGKKKRRGSGDDATPGS 667



 Score =  172 bits (435), Expect = 3e-40
 Identities = 89/122 (72%), Positives = 92/122 (75%), Gaps = 17/122 (13%)
 Frame = +1

Query: 58  NLPNGQQSQA------SRSAIPLPQGISR-----------YFIVKSCNRENFELSVQQGV 186
           +L NGQ  Q       +R A PLPQGIS            YFIVKSCNREN ELSVQQGV
Sbjct: 222 HLTNGQHQQPQQPNPLNRIATPLPQGISSFFSCVSPSQFVYFIVKSCNRENLELSVQQGV 281

Query: 187 WATQRSNEAKLNEAFDSVDNVILIFSVNRTRHFQGCAKMTSRIGGSVGGGNWKYAHGTAH 366
           WATQRSNE KLNEA DS DNVILIFSVNRTRHFQGCAKM S+IG SVGGGNWKYAHGTAH
Sbjct: 282 WATQRSNEIKLNEALDSADNVILIFSVNRTRHFQGCAKMASKIGASVGGGNWKYAHGTAH 341

Query: 367 YG 372
           YG
Sbjct: 342 YG 343