BLASTX nr result

ID: Bupleurum21_contig00010062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010062
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283081.1| PREDICTED: probable beta-1,3-galactosyltrans...   445   e-123
ref|XP_002330737.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
ref|XP_003527208.1| PREDICTED: probable beta-1,3-galactosyltrans...   439   e-121
ref|XP_004163641.1| PREDICTED: probable beta-1,3-galactosyltrans...   436   e-120
ref|XP_004146030.1| PREDICTED: probable beta-1,3-galactosyltrans...   434   e-119

>ref|XP_002283081.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Vitis
           vinifera]
          Length = 348

 Score =  445 bits (1144), Expect = e-123
 Identities = 223/325 (68%), Positives = 251/325 (77%), Gaps = 10/325 (3%)
 Frame = -1

Query: 947 MPSSPKFFHXXXXXXXXXXXXXALIVCFILGSLGFIVGLVAISRQNLGYKC--KDVKPRS 774
           MPS PKFFH              L+ C + G  GF+ G++A  R   GY C       RS
Sbjct: 1   MPSFPKFFHARQPPSRSKFTFFILL-CLVTGFGGFLFGILAFLRPGSGYSCIGGGGPVRS 59

Query: 773 VSVVWDKIG--------NGNLDERDHKRHKSMGFVGIQTGFGSAGRRRSLRQTWMPSNHQ 618
           VSVVWDK G        +G   +   KR+K MGFVGIQTGFGS GRRRSLR++WMP++ Q
Sbjct: 60  VSVVWDKSGGGGGGGSGDGGGGDGGGKRYKVMGFVGIQTGFGSVGRRRSLRKSWMPADRQ 119

Query: 617 GLQRLEESTGLVFRFIIGRTKDKAKMSELMNEVAEFDDFVLLDITEEYSKLPYKTLAFFK 438
           GLQRLE++TGL FRF+IGRT D+AKM+EL  EVA++DDF+LLDI EEYSKLPYKTLAFFK
Sbjct: 120 GLQRLEDATGLAFRFVIGRTNDRAKMAELRKEVAQYDDFMLLDIEEEYSKLPYKTLAFFK 179

Query: 437 AAYALYDADFYVKADDDIYLRPDRLSLLLAKERTHTQTYLGCMKKGPVFTDPKLKWYEPL 258
           AAYAL+D++FYVKADDDIYLRPDRLSLLLAKER+H+QTYLGCMKKGPVFTDPKLKWYEPL
Sbjct: 180 AAYALFDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYLGCMKKGPVFTDPKLKWYEPL 239

Query: 257 SNLLGKEYFFHAYGPIYXXXXXXXXXXXXLRNDSFRMFSNEDVTIGAWMLAMNVNHEDNR 78
           S +LG EYF HAYGPIY            LRN+SFRMFSNEDVTIGAWMLAMNVNHEDNR
Sbjct: 240 SYMLGNEYFLHAYGPIYALSADVVASLVALRNNSFRMFSNEDVTIGAWMLAMNVNHEDNR 299

Query: 77  QLCQPECTSTSIAVWDIPKCSGLCN 3
            LC PECTS+SIAVWDIPKCSGLCN
Sbjct: 300 ALCSPECTSSSIAVWDIPKCSGLCN 324


>ref|XP_002330737.1| predicted protein [Populus trichocarpa] gi|222872513|gb|EEF09644.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  441 bits (1135), Expect = e-121
 Identities = 224/327 (68%), Positives = 251/327 (76%), Gaps = 12/327 (3%)
 Frame = -1

Query: 947 MPSSPKFFHXXXXXXXXXXXXXALIV-CFILGSLGFIVGLVAISRQNLGYKC-KDVKPRS 774
           MPSSPKFFH              LI+ C ++G  GFI GL +    +  Y+C  +  PRS
Sbjct: 1   MPSSPKFFHSRLSQPSNSRRSTVLILSCLLIGISGFIFGLTSFLTCSHTYRCFNNSPPRS 60

Query: 773 VSVVWDKIGNGN---------LD-ERDHKRHKSMGFVGIQTGFGSAGRRRSLRQTWMPSN 624
           V VVW    N N         LD E   +R K MGFVGIQTGFGS+GRRRSLR+TWMPS+
Sbjct: 61  VRVVWGTNSNMNDNGVGNAVLLDGEERRERQKVMGFVGIQTGFGSSGRRRSLRKTWMPSD 120

Query: 623 HQGLQRLEESTGLVFRFIIGRTKDKAKMSELMNEVAEFDDFVLLDITEEYSKLPYKTLAF 444
            QGLQRLEESTGL FRF+IGRT DK+KM+EL  E+AE+DDF+LLDI E+YS+LPYKTLAF
Sbjct: 121 RQGLQRLEESTGLAFRFVIGRTNDKSKMAELKREIAEYDDFLLLDIEEQYSQLPYKTLAF 180

Query: 443 FKAAYALYDADFYVKADDDIYLRPDRLSLLLAKERTHTQTYLGCMKKGPVFTDPKLKWYE 264
           FKAAYAL+D++FYVKADDDIYLRPDRLS LLAKER H+QTYLGC+KKGPVFTDPKLKWYE
Sbjct: 181 FKAAYALFDSEFYVKADDDIYLRPDRLSTLLAKERAHSQTYLGCLKKGPVFTDPKLKWYE 240

Query: 263 PLSNLLGKEYFFHAYGPIYXXXXXXXXXXXXLRNDSFRMFSNEDVTIGAWMLAMNVNHED 84
           PLS LLGKEYF HAYGPIY            LRN+SFRMFSNEDVTIGAW+LAMNVNHED
Sbjct: 241 PLSYLLGKEYFLHAYGPIYALSADVVASLVALRNNSFRMFSNEDVTIGAWILAMNVNHED 300

Query: 83  NRQLCQPECTSTSIAVWDIPKCSGLCN 3
           NR LC PECT +SIAVWDIPKCSGLCN
Sbjct: 301 NRALCSPECTPSSIAVWDIPKCSGLCN 327


>ref|XP_003527208.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Glycine
           max]
          Length = 338

 Score =  439 bits (1129), Expect = e-121
 Identities = 220/315 (69%), Positives = 243/315 (77%)
 Frame = -1

Query: 947 MPSSPKFFHXXXXXXXXXXXXXALIVCFILGSLGFIVGLVAISRQNLGYKCKDVKPRSVS 768
           MPSSPK +               L +  +L  L F+ G+VA   Q  G +C +  PRSV 
Sbjct: 1   MPSSPKSYAISYARQPTRRSTLYLFLSALL--LLFLFGIVAFLAQIRGSRCVNAHPRSVR 58

Query: 767 VVWDKIGNGNLDERDHKRHKSMGFVGIQTGFGSAGRRRSLRQTWMPSNHQGLQRLEESTG 588
           VVW+          D  RHK MGFVGIQTGFGSAGRR SLR+TW PS+ QGLQRLEE+TG
Sbjct: 59  VVWEHSAGAGTVAGDGGRHKVMGFVGIQTGFGSAGRRVSLRKTWFPSDRQGLQRLEEATG 118

Query: 587 LVFRFIIGRTKDKAKMSELMNEVAEFDDFVLLDITEEYSKLPYKTLAFFKAAYALYDADF 408
           L FRFIIGRT D+AKMS L  EVAE+DDF+LLDI EEYSKLPYKTLAFFKAAYAL+DA+F
Sbjct: 119 LAFRFIIGRTSDRAKMSALQKEVAEYDDFILLDIQEEYSKLPYKTLAFFKAAYALFDAEF 178

Query: 407 YVKADDDIYLRPDRLSLLLAKERTHTQTYLGCMKKGPVFTDPKLKWYEPLSNLLGKEYFF 228
           YVKADDDIYLRPDRLSLLLAKER+H QTY+GCMKKGPVFTDPKLKWYEPLS+LLGKEYF 
Sbjct: 179 YVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSHLLGKEYFL 238

Query: 227 HAYGPIYXXXXXXXXXXXXLRNDSFRMFSNEDVTIGAWMLAMNVNHEDNRQLCQPECTST 48
           HAYGPIY            LRNDSFRMFSNEDVTIGAWMLAMNVNHE+N +LC  +CT+T
Sbjct: 239 HAYGPIYVLSADVVQSLVALRNDSFRMFSNEDVTIGAWMLAMNVNHENNHELCATDCTAT 298

Query: 47  SIAVWDIPKCSGLCN 3
           SIAVWDIPKCSGLCN
Sbjct: 299 SIAVWDIPKCSGLCN 313


>ref|XP_004163641.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Cucumis
           sativus]
          Length = 347

 Score =  436 bits (1120), Expect = e-120
 Identities = 218/321 (67%), Positives = 245/321 (76%), Gaps = 6/321 (1%)
 Frame = -1

Query: 947 MPSSPKFFHXXXXXXXXXXXXXA----LIVCFILGSLGFIVGLVAISRQNLGYKCKDVKP 780
           MPSSPK FH             +    L  C ++G  GFI  L +    +L   C + +P
Sbjct: 1   MPSSPKLFHSRHSPTSPFYSSRSSLFLLSFCLLIGISGFIFVLTSFFTPHLRNNCSNRQP 60

Query: 779 RSVSVVWDKIGNGNL--DERDHKRHKSMGFVGIQTGFGSAGRRRSLRQTWMPSNHQGLQR 606
           R+V VVWD+  +        D KRHK MGFVGIQTGF S GRRRSLR TW+PS+ +GLQR
Sbjct: 61  RTVRVVWDRAPDSAALTTGSDAKRHKVMGFVGIQTGFSSVGRRRSLRNTWLPSDREGLQR 120

Query: 605 LEESTGLVFRFIIGRTKDKAKMSELMNEVAEFDDFVLLDITEEYSKLPYKTLAFFKAAYA 426
           LEESTGL FRFIIG+T DKAKM EL  EVAE+DDF+LLDI EEYSKLPYKTLAFFKAAYA
Sbjct: 121 LEESTGLAFRFIIGKTSDKAKMLELKKEVAEYDDFLLLDIEEEYSKLPYKTLAFFKAAYA 180

Query: 425 LYDADFYVKADDDIYLRPDRLSLLLAKERTHTQTYLGCMKKGPVFTDPKLKWYEPLSNLL 246
           LYD++FYVKADDDIYLRPDRLSLLLAKER+H+QTY+GCMKKGPVFTD KLKWYEPLS+LL
Sbjct: 181 LYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYIGCMKKGPVFTDSKLKWYEPLSHLL 240

Query: 245 GKEYFFHAYGPIYXXXXXXXXXXXXLRNDSFRMFSNEDVTIGAWMLAMNVNHEDNRQLCQ 66
           G EYFFHAYGPIY            L+N+SFRMFSNEDVTIGAWMLAMNVNHE+ + LC 
Sbjct: 241 GNEYFFHAYGPIYILSADVVASLVALKNNSFRMFSNEDVTIGAWMLAMNVNHENEKALCA 300

Query: 65  PECTSTSIAVWDIPKCSGLCN 3
           P+CT TSIAVWDIPKCSGLCN
Sbjct: 301 PDCTPTSIAVWDIPKCSGLCN 321


>ref|XP_004146030.1| PREDICTED: probable beta-1,3-galactosyltransferase 14-like [Cucumis
           sativus]
          Length = 347

 Score =  434 bits (1116), Expect = e-119
 Identities = 217/321 (67%), Positives = 244/321 (76%), Gaps = 6/321 (1%)
 Frame = -1

Query: 947 MPSSPKFFHXXXXXXXXXXXXXA----LIVCFILGSLGFIVGLVAISRQNLGYKCKDVKP 780
           MPSSPK FH             +    L  C ++G  GFI    +    +L   C + +P
Sbjct: 1   MPSSPKLFHSRHSPTSPFYSSRSSLFLLSFCLLIGISGFIFVFTSFFTPHLRNNCSNRQP 60

Query: 779 RSVSVVWDKIGNGNL--DERDHKRHKSMGFVGIQTGFGSAGRRRSLRQTWMPSNHQGLQR 606
           R+V VVWD+  +        D KRHK MGFVGIQTGF S GRRRSLR TW+PS+ +GLQR
Sbjct: 61  RTVRVVWDRAPDSAALTTGSDAKRHKVMGFVGIQTGFSSVGRRRSLRNTWLPSDREGLQR 120

Query: 605 LEESTGLVFRFIIGRTKDKAKMSELMNEVAEFDDFVLLDITEEYSKLPYKTLAFFKAAYA 426
           LEESTGL FRFIIG+T DKAKM EL  EVAE+DDF+LLDI EEYSKLPYKTLAFFKAAYA
Sbjct: 121 LEESTGLAFRFIIGKTSDKAKMLELKKEVAEYDDFLLLDIEEEYSKLPYKTLAFFKAAYA 180

Query: 425 LYDADFYVKADDDIYLRPDRLSLLLAKERTHTQTYLGCMKKGPVFTDPKLKWYEPLSNLL 246
           LYD++FYVKADDDIYLRPDRLSLLLAKER+H+QTY+GCMKKGPVFTD KLKWYEPLS+LL
Sbjct: 181 LYDSEFYVKADDDIYLRPDRLSLLLAKERSHSQTYIGCMKKGPVFTDSKLKWYEPLSHLL 240

Query: 245 GKEYFFHAYGPIYXXXXXXXXXXXXLRNDSFRMFSNEDVTIGAWMLAMNVNHEDNRQLCQ 66
           G EYFFHAYGPIY            L+N+SFRMFSNEDVTIGAWMLAMNVNHE+ + LC 
Sbjct: 241 GNEYFFHAYGPIYILSADVVASLVALKNNSFRMFSNEDVTIGAWMLAMNVNHENEKALCA 300

Query: 65  PECTSTSIAVWDIPKCSGLCN 3
           P+CT TSIAVWDIPKCSGLCN
Sbjct: 301 PDCTPTSIAVWDIPKCSGLCN 321


Top