BLASTX nr result

ID: Bupleurum21_contig00010043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010043
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm...   381   e-103
ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|XP_003533381.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   365   1e-98
ref|XP_003530003.1| PREDICTED: uncharacterized protein LOC100780...   358   1e-96

>ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis]
            gi|223545526|gb|EEF47031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  381 bits (978), Expect = e-103
 Identities = 193/329 (58%), Positives = 244/329 (74%), Gaps = 4/329 (1%)
 Frame = +2

Query: 2    LLPCTEYSFRIVSYTEAGEMGHSEAKCFTRSVEIIRKN-SSSVAVNNNCENPQAVTNKKT 178
            L PCTEY+FRIVSYTEAG+ GHSEAKCFT+S+EII KN +SSV+ N    N         
Sbjct: 401  LQPCTEYTFRIVSYTEAGDFGHSEAKCFTKSIEIIHKNPNSSVSTNGKNANNSLEGGMSG 460

Query: 179  STECKTGAEAESESGFQVRGLGKVLEIASSQEQGCLDKLSSAQRDNCCEVGNQLIPQYVK 358
            S   +  +++ + SGF+VR LGK+L +A +Q+QGC +   SA  + CC       P+  +
Sbjct: 461  S---RRESKSTNSSGFKVRELGKILHLAWAQKQGCFEGFCSADTEKCCGATEVTKPETPE 517

Query: 359  DQPQAVSCELDLNVA--PDLNEELTPLVESSKDEHNVCTLERVVAAFDEV-SRDNQRNNV 529
            D+  ++S  LDLNV   PDLNEELTP +ESS+DE N CTLE+ V A D+  S D ++N +
Sbjct: 518  DELPSISRGLDLNVVSVPDLNEELTPPLESSRDEDNGCTLEQTVEADDDAASHDIKKNGL 577

Query: 530  EKSHGSGDSRNYNQRPNADLSTVDSKGKACKKRPATANEEPHDCDSTLVNGSSRCGIHTG 709
             +SHGSGDS+ +   P+ ++  VDS+ + C+KR A +NEE HDCDSTL+NGS    + TG
Sbjct: 578  ARSHGSGDSQTWTDGPSGEVPAVDSRAELCRKRAAHSNEEMHDCDSTLINGSP-FRVSTG 636

Query: 710  SGSLGENFEYCVKVIRWLECEGYIKAEFRLKLLTWYSLRATEQERRVVNTFIQTLIDDPS 889
            SG L ENFEYCVK+IRWLECEG+I  EFRLKLLTW+SLR+TEQERRVVNTFIQTLIDDPS
Sbjct: 637  SGCLDENFEYCVKIIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPS 696

Query: 890  SLAGQLIDSFSDVVSTKRPKNAFCSKLWH 976
            SLAGQL+DSFSD++S+KRP+N FCSKLWH
Sbjct: 697  SLAGQLVDSFSDIISSKRPRNGFCSKLWH 725


>ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1|
            predicted protein [Populus trichocarpa]
          Length = 717

 Score =  377 bits (967), Expect = e-102
 Identities = 195/331 (58%), Positives = 244/331 (73%), Gaps = 6/331 (1%)
 Frame = +2

Query: 2    LLPCTEYSFRIVSYTEAGEMGHSEAKCFTRSVEIIRKNSS-SVAVNNNCENPQAVTNKKT 178
            L PCTEY+FRIVSYTEAG++GHSEAKCFT+S+EII KN + SVA N+  EN   +T   T
Sbjct: 390  LQPCTEYTFRIVSYTEAGDLGHSEAKCFTKSIEIIHKNPNPSVARNSKKEN--TITGGCT 447

Query: 179  STECKTGAEAE--SESGFQVRGLGKVLEIASSQEQGCLDKLSSAQRDNCCEVGNQLIPQY 352
            S+  +    A   + SGF+VR LGK+L +A +Q+QGC +   SA  + CC     +  Q 
Sbjct: 448  SSYNRDSETATGVNSSGFKVRDLGKILHLAGAQQQGCFEGFCSADTEKCCGASKLVKLQT 507

Query: 353  VKDQPQAVSCELDLNVA--PDLNEELTPLVESSKDEHNVCTLERVVAAFDEV-SRDNQRN 523
             +D   +VS  LDLNV   PDLNEELTP  ESS+DE N CTLE+ + A D+  S + ++N
Sbjct: 508  SEDPVPSVSHGLDLNVVSMPDLNEELTPPFESSRDEDNGCTLEQAIEADDDAASHEVEKN 567

Query: 524  NVEKSHGSGDSRNYNQRPNADLSTVDSKGKACKKRPATANEEPHDCDSTLVNGSSRCGIH 703
             +  SHGSGDS+ +   P+ ++ TVDS+ + C+KR A ANE+ HDCDSTL+NGS    + 
Sbjct: 568  GLATSHGSGDSQTWMHGPSGEVPTVDSRSELCRKRAAHANEDLHDCDSTLINGSP-FHVS 626

Query: 704  TGSGSLGENFEYCVKVIRWLECEGYIKAEFRLKLLTWYSLRATEQERRVVNTFIQTLIDD 883
            +GSG L ENFEYCVK IRWLECEG+I  EFRLKLLTW+SLR+TEQERRVVNTFIQTLIDD
Sbjct: 627  SGSGYLDENFEYCVKTIRWLECEGHINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDD 686

Query: 884  PSSLAGQLIDSFSDVVSTKRPKNAFCSKLWH 976
            PSSLAGQL+DSFSD++S+KRP+N FC KLWH
Sbjct: 687  PSSLAGQLVDSFSDIISSKRPRNGFCGKLWH 717


>ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|222874135|gb|EEF11266.1|
            predicted protein [Populus trichocarpa]
          Length = 612

 Score =  375 bits (962), Expect = e-101
 Identities = 196/332 (59%), Positives = 245/332 (73%), Gaps = 7/332 (2%)
 Frame = +2

Query: 2    LLPCTEYSFRIVSYTEAGEMGHSEAKCFTRSVEIIRKNSS-SVAVNNNCENPQAVTNKKT 178
            L PCTEY+FRIVSYTEAG++GHSEAKCFT+S+EII+KN + SVA N   EN   VT   T
Sbjct: 286  LQPCTEYTFRIVSYTEAGDLGHSEAKCFTKSIEIIQKNPNPSVARNGKKEN--TVTGGYT 343

Query: 179  ST---ECKTGAEAESESGFQVRGLGKVLEIASSQEQGCLDKLSSAQRDNCCEVGNQLIPQ 349
            S+   + KT   A + SGF VR LGK+L +A +Q+QGC +   SA  + CC     + PQ
Sbjct: 344  SSYNRDSKT-TTAVNSSGFMVRDLGKILHLAGAQKQGCFEGFCSADTEKCCGGSKVVKPQ 402

Query: 350  YVKDQPQAVSCELDLNVA--PDLNEELTPLVESSKDEHNVCTLERVVAAFDEV-SRDNQR 520
              +D   ++S  LDLNV   PDLNEELTP  ESS+DE N CTLE+ + A D+  S D ++
Sbjct: 403  TSEDPVPSISHGLDLNVVSVPDLNEELTPF-ESSRDEDNGCTLEQAIEADDDAASHDVEK 461

Query: 521  NNVEKSHGSGDSRNYNQRPNADLSTVDSKGKACKKRPATANEEPHDCDSTLVNGSSRCGI 700
            N++ +SHG+GDS+ +   P+ ++ TVDS+ + C+KR A  NE+ HDCDSTL+N  S   +
Sbjct: 462  NDLARSHGTGDSQTWMHGPSREVPTVDSRSELCRKRAAHTNEDVHDCDSTLIN-ESPFRV 520

Query: 701  HTGSGSLGENFEYCVKVIRWLECEGYIKAEFRLKLLTWYSLRATEQERRVVNTFIQTLID 880
             +GSG L ENFEYCVK IRWLECEGYI  EFRLKLLTW+SLR+TEQERRVVNTFIQTLID
Sbjct: 521  SSGSGYLDENFEYCVKAIRWLECEGYINQEFRLKLLTWFSLRSTEQERRVVNTFIQTLID 580

Query: 881  DPSSLAGQLIDSFSDVVSTKRPKNAFCSKLWH 976
            DPSSL GQL+DSFSD++S+KRP+N FC KLWH
Sbjct: 581  DPSSLGGQLVDSFSDIISSKRPRNGFCGKLWH 612


>ref|XP_003533381.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 651

 Score =  365 bits (937), Expect = 1e-98
 Identities = 190/330 (57%), Positives = 239/330 (72%), Gaps = 9/330 (2%)
 Frame = +2

Query: 2    LLPCTEYSFRIVSYTEAGEMGHSEAKCFTRSVEIIRKNSSS-VAVNNNCENPQAVTNKKT 178
            L PCTEY+FRIVS+T+  ++GHSEAKCFT+S+EI+ KNSSS VA+N   EN Q       
Sbjct: 324  LQPCTEYTFRIVSFTDTSDLGHSEAKCFTKSIEILEKNSSSSVAMNKKKENLQ------- 376

Query: 179  STECKT-GAEAE-----SESGFQVRGLGKVLEIASSQEQGCLDKLSSAQRDNCCEVGNQL 340
             TEC + G+E E      +SGF+VR LGK+L ++ +QEQGC ++   A + NCC     +
Sbjct: 377  -TECNSSGSEMEPNPTMEDSGFKVRDLGKILHLSWAQEQGCFEEFCCADKRNCCGKSETI 435

Query: 341  IPQYVKDQPQAVSCELDLNVA--PDLNEELTPLVESSKDEHNVCTLERVVAAFDEVSRDN 514
             P  +++Q  +VS +LDLNV   PDLNEELTPL ESS+DE N CTL++ V A D+ +  +
Sbjct: 436  KPTNLQEQLPSVSRDLDLNVVSVPDLNEELTPLFESSRDEDNGCTLQQAVEADDDAASHD 495

Query: 515  QRNNVEKSHGSGDSRNYNQRPNADLSTVDSKGKACKKRPATANEEPHDCDSTLVNGSSRC 694
               N+  SHGSG S+ +N  P  ++  VDS+G AC+KR A+ NEE HDCDSTL+N S   
Sbjct: 496  LEKNLAISHGSGGSQTWNHGPTGEVPAVDSRGDACRKRMASTNEETHDCDSTLINDSP-L 554

Query: 695  GIHTGSGSLGENFEYCVKVIRWLECEGYIKAEFRLKLLTWYSLRATEQERRVVNTFIQTL 874
                G  SL ENFEYCVKVIRWLEC+G+IK EFRLKLLTW+SLR+TEQERRVVNTFIQTL
Sbjct: 555  RASDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTL 614

Query: 875  IDDPSSLAGQLIDSFSDVVSTKRPKNAFCS 964
            IDDPSSLAGQL+DSFSD++S KRP+N   S
Sbjct: 615  IDDPSSLAGQLVDSFSDIISNKRPRNGLSS 644


>ref|XP_003530003.1| PREDICTED: uncharacterized protein LOC100780157 [Glycine max]
          Length = 733

 Score =  358 bits (920), Expect = 1e-96
 Identities = 186/331 (56%), Positives = 238/331 (71%), Gaps = 9/331 (2%)
 Frame = +2

Query: 2    LLPCTEYSFRIVSYTEAGEMGHSEAKCFTRSVEIIRKNSSS-VAVNNNCENPQAVTNKKT 178
            L PCTEY+FR+VS+T+ G++GHSEAKCFT+S+EI+ KNSSS VA+N   EN Q       
Sbjct: 407  LQPCTEYTFRVVSFTDMGDLGHSEAKCFTKSIEILEKNSSSSVAMNKKKENLQ------- 459

Query: 179  STECKT-GAEAE-----SESGFQVRGLGKVLEIASSQEQGCLDKLSSAQRDNCCEVGNQL 340
             TEC + G++ E      +SGF+VR LGK+L ++ +QEQGC ++   A +  CC     +
Sbjct: 460  -TECNSSGSKMEPNPTMEDSGFKVRDLGKILHLSWAQEQGCSEEFCCADKRKCCGQSETI 518

Query: 341  IPQYVKDQPQAVSCELDLNVA--PDLNEELTPLVESSKDEHNVCTLERVVAAFDEVSRDN 514
             P   ++   +VS +LDLNV   PDLNEELTP  ESS+DE N CTL++ V A D+ +  +
Sbjct: 519  KPTNPQELLPSVSRDLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHD 578

Query: 515  QRNNVEKSHGSGDSRNYNQRPNADLSTVDSKGKACKKRPATANEEPHDCDSTLVNGSSRC 694
               N+ +SHGSG S+ +N  P  ++  VDS+G AC+KR A+ NEE HDCDSTL+N S   
Sbjct: 579  LEKNLARSHGSGGSQTWNHGPTGEVPAVDSRGDACRKRVASTNEETHDCDSTLINDSP-L 637

Query: 695  GIHTGSGSLGENFEYCVKVIRWLECEGYIKAEFRLKLLTWYSLRATEQERRVVNTFIQTL 874
                G  SL ENFEYCVKVIRWLEC+G+IK EFRLKLLTW+SLR+TEQERRVVNTFIQ L
Sbjct: 638  RASDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQAL 697

Query: 875  IDDPSSLAGQLIDSFSDVVSTKRPKNAFCSK 967
            IDDPSSLAGQL+DSFSD++S KRP+N F +K
Sbjct: 698  IDDPSSLAGQLVDSFSDIISNKRPRNGFSNK 728


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