BLASTX nr result

ID: Bupleurum21_contig00010026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010026
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX26124.1| bypass1 [Nicotiana benthamiana]                         77   2e-12
dbj|BAF46312.1| hypothetical protein [Ipomoea nil]                     72   6e-11
ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ...    70   2e-10
gb|ABB16971.1| unknown [Solanum tuberosum]                             69   8e-10
gb|ABX26123.1| bypass2 [Nicotiana benthamiana]                         66   4e-09

>gb|ABX26124.1| bypass1 [Nicotiana benthamiana]
          Length = 352

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = -3

Query: 602 SDLEKSSTKFSKGLDILLKEVDGFFQILLTGRDALLCNLRAGTDVSSPMQINNN 441
           SDL K S K S+GLD+L KE+D FFQILLTGRDALLCNLR G+ V  P+Q NNN
Sbjct: 292 SDLTKKSEKLSEGLDLLTKEMDKFFQILLTGRDALLCNLRVGSAVIKPVQPNNN 345


>dbj|BAF46312.1| hypothetical protein [Ipomoea nil]
          Length = 351

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = -3

Query: 602 SDLEKSSTKFSKGLDILLKEVDGFFQILLTGRDALLCNLRAGTDVSSPMQINNNRGQVVR 423
           S L K + + SKGLD L KEVDGFFQI+LTGRDALLCNLR G++ +SP Q NN     +R
Sbjct: 292 SGLAKMADRLSKGLDGLAKEVDGFFQIVLTGRDALLCNLRIGSNNASPSQENNAEQPTLR 351


>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
          Length = 350

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/61 (57%), Positives = 46/61 (75%)
 Frame = -3

Query: 605 ISDLEKSSTKFSKGLDILLKEVDGFFQILLTGRDALLCNLRAGTDVSSPMQINNNRGQVV 426
           +SDL KS  K S+GLD+L K+VDGFFQ++LTGRDALLCNLR      SPM  +N + +++
Sbjct: 292 VSDLGKSVEKLSEGLDLLTKDVDGFFQMVLTGRDALLCNLRV-----SPMHEDNTQARIL 346

Query: 425 R 423
           R
Sbjct: 347 R 347


>gb|ABB16971.1| unknown [Solanum tuberosum]
          Length = 352

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = -3

Query: 602 SDLEKSSTKFSKGLDILLKEVDGFFQILLTGRDALLCNLRAGTDVSSPMQINNN 441
           S+L + + K S GLD+L KE D FF ILLTGRD+LLCNLR  + VS+P ++NNN
Sbjct: 292 SNLTEKAEKLSGGLDLLAKEADRFFHILLTGRDSLLCNLRIDSTVSNPAEVNNN 345


>gb|ABX26123.1| bypass2 [Nicotiana benthamiana]
          Length = 352

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = -3

Query: 596 LEKSSTKFSKGLDILLKEVDGFFQILLTGRDALLCNLRAGTDVSSPMQINN 444
           L + + K S+GLD+L KE D FFQILLTGRD+LLCNLR G+ VS+  Q NN
Sbjct: 294 LTEKAEKLSEGLDLLAKEADRFFQILLTGRDSLLCNLRVGSTVSNLAQANN 344


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