BLASTX nr result

ID: Bupleurum21_contig00010023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00010023
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76779.1| hypothetical protein VITISV_032081 [Vitis vinifera]    79   4e-12
ref|XP_002303381.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-11
ref|XP_002524975.1| conserved hypothetical protein [Ricinus comm...    74   1e-10
emb|CBI33727.3| unnamed protein product [Vitis vinifera]               67   2e-08
ref|XP_002307294.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-08

>emb|CAN76779.1| hypothetical protein VITISV_032081 [Vitis vinifera]
          Length = 323

 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 76/286 (26%), Positives = 110/286 (38%), Gaps = 29/286 (10%)
 Frame = +1

Query: 343  EDFNFNSCGGSFLGDSQMCAADEVFFKGKLLPFRHSISSETGLTMFHHDIRP---FISRS 513
            EDF+F S   S L +S MCAADEVFF+G++LP R S+SS++GL  + +D R     +SRS
Sbjct: 52   EDFDFGSWNRSLLAESDMCAADEVFFQGQILPLRLSVSSDSGLAGYRNDSRKSSRCVSRS 111

Query: 514  QSLDHRYTNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPILHHRKPP 693
            +S+D                                             ++         
Sbjct: 112  ESMDR-----------------------GSWGGFTSVSSRSSSSRSHNSSISSTSTATTH 148

Query: 694  RARTPNQFHSHPSPIPQIR-HHRNTMNQSQSHHWSQKWRFFHMGSSVQATERKFADLKIR 870
            R+R  N FH+HPSP PQI+  +    N       S  W  F  G  V+  E +  DLK+R
Sbjct: 149  RSRVRNHFHAHPSPKPQIKIFNTRQGNIGSRGRKSTMWDLFRPG-LVRTPEIELQDLKVR 207

Query: 871  ------DNKNMKXXXXXXXXXXXXXXXXENVN---RKNNYWTI-----FNECKCRVDAID 1008
                  D++N                     N   R+++ ++I      + CKC + A+D
Sbjct: 208  STNKGFDSRNSSRSSSFNSTANNTAKSNHGFNAEKRRSHRFSIKKREFLSGCKCSISAVD 267

Query: 1009 ---QRRLVSXXXXXXXXXXXXXXXXVMSRD--------RTFEWLKQ 1113
                R +V                    R         RTFEWLK+
Sbjct: 268  PVPSRIVVIKTSSNGGDSNPNERPSQKQRQHVKKKNMHRTFEWLKE 313


>ref|XP_002303381.1| predicted protein [Populus trichocarpa] gi|222840813|gb|EEE78360.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 75.9 bits (185), Expect = 3e-11
 Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
 Frame = +1

Query: 310 EKADGKLQVDQEDFNFNSC---GGSFLGDSQMCAADEVFFKGKLLPFRHSISSETGLTMF 480
           ++A  + + +QEDF+F       GS    S MCAAD++FF+G++LP R S+SSE+G+  F
Sbjct: 52  QEAHKETETNQEDFDFGPFRGGDGSLSNKSDMCAADDIFFQGQILPLRLSVSSESGVNKF 111

Query: 481 HHD--IRP--FISRSQSLDHRYTNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 648
            +D  + P   +SRS+S+DH                                        
Sbjct: 112 KNDTSLNPCHCLSRSESMDHN---------------SLGGLTSFSSRSSSSRSHYSSSST 156

Query: 649 XXXXAVPILHHRKPPRARTPNQFHSHPSPIPQIRHHRNTMNQSQSH--HWSQKWRFFHMG 822
               A+      KP      NQF +HPSP PQIR    ++  + S     S  W FF +G
Sbjct: 157 STSSAIASTRMIKP---IIQNQFLTHPSPKPQIRLSSASLGNAASSKPRNSSVWDFFRLG 213

Query: 823 SSVQATERKFADLKIRD 873
             V+  E +F DLK+R+
Sbjct: 214 -LVRTPEIEFQDLKVRN 229


>ref|XP_002524975.1| conserved hypothetical protein [Ricinus communis]
            gi|223535810|gb|EEF37472.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 381

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 67/253 (26%), Positives = 98/253 (38%), Gaps = 28/253 (11%)
 Frame = +1

Query: 331  QVDQEDFNFNSCGGSFLGDSQMCAADEVFFKGKLLPFRHSISSETGL------TMFHHDI 492
            ++ QEDFNF         DS+MCAAD++FF G++LPFR S+SSE+G+           + 
Sbjct: 51   EIIQEDFNFGKWD-----DSEMCAADDIFFDGQILPFRLSVSSESGIGPNNCCKQDSLNR 105

Query: 493  RPFISRSQSLDHRYTNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPI 672
               +SRS+S+DH  T                                             
Sbjct: 106  NRCLSRSESIDHGSTAGFTSFSSRSSSSRSQLSSTSTNSSSVNTT--------------- 150

Query: 673  LHHRKPPRARTPNQFHSHPSPIPQIRHHRNTMNQ---SQSHHWSQKWRFFHMGSSVQATE 843
                +  + R  NQFH+HPSP PQIR   N++     ++S   S  W  F +G  V+A E
Sbjct: 151  --SSRISKPRFQNQFHAHPSPKPQIRLSNNSLGNAATNKSRKSSTVWDIFRLG-LVRAPE 207

Query: 844  RKFADLKIR-------------DNKNMKXXXXXXXXXXXXXXXXENVNRKNNY------W 966
             +  DLK R              N N+K                    RK ++       
Sbjct: 208  IELQDLKTRTSVSRNSSSSSSNSNSNIKVSGNSSSSEGKKMEKQNQKQRKQSFSEKRSSG 267

Query: 967  TIFNECKCRVDAI 1005
            ++ + C C V A+
Sbjct: 268  SLLSGCSCTVSAV 280


>emb|CBI33727.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +1

Query: 343 EDFNFNSCGGSFLGDSQMCAADEVFFKGKLLPFRHSISSETGLTMFHHDIRP---FISRS 513
           EDF+F S   S L +S MCAADEVFF+G++LP R S+SS++GL  + +D R     +SRS
Sbjct: 79  EDFDFGSWNRSLLAESDMCAADEVFFQGQILPLRLSVSSDSGLAGYRNDSRKSSRCVSRS 138

Query: 514 QSLD 525
           +S+D
Sbjct: 139 ESMD 142


>ref|XP_002307294.1| predicted protein [Populus trichocarpa] gi|222856743|gb|EEE94290.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
 Frame = +1

Query: 310 EKADGKLQVDQEDFNFNSCGGS--FLGDSQMCAADEVFFKGKLLPFRHSISSETGLTMFH 483
           ++A    + +QEDF+F   GG       S MCAAD++FF+G++LP R S SSE+G+  F 
Sbjct: 49  QEAHQGTETNQEDFDFGPWGGDGYLSKKSDMCAADDIFFQGQILPLRLSFSSESGVNKFE 108

Query: 484 HD--IRP--FISRSQSLDHRYTNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 651
            D  + P   +SRS S DH                                         
Sbjct: 109 SDSSLNPSHCLSRSASTDHN---------------SIGVFTTFSGMSSSSRSHYSSSSNN 153

Query: 652 XXXAVPILHHRKPPRARTPNQFHSHPSPIPQIRHHRNTMNQSQSH--HWSQKWRFFHMGS 825
              A+      KP   +  NQF +H SP PQIR    ++  +  +    S  W  F +G 
Sbjct: 154 TSSAIASTRMIKP---KLQNQFLTHRSPKPQIRLSSTSLGNAACNRPRNSSFWDLFRLG- 209

Query: 826 SVQATERKFADLKIRDN 876
            ++  E +  DLK+R++
Sbjct: 210 LIRTPEIELQDLKVRNS 226


Top