BLASTX nr result

ID: Bupleurum21_contig00009994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009994
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242...    96   1e-17
ref|XP_002330342.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_002315561.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13
ref|XP_002516905.1| conserved hypothetical protein [Ricinus comm...    80   7e-13
gb|AFW84033.1| src2-like protein [Zea mays]                            78   3e-12

>ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242678 [Vitis vinifera]
          Length = 291

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 6/131 (4%)
 Frame = +3

Query: 87  TLHLTIISAEGLKDINYITKMRTYVEVSIVGGTQAHKQRTLTDMDGGTSPTWNCPMSFTF 266
           TL + +ISA+ LKD+N I+KM  YV VSI G +++ KQ+T  D DGGT+PTWN PM FT 
Sbjct: 5   TLEINVISAKDLKDVNLISKMDVYVVVSINGDSRS-KQKTPVDRDGGTNPTWNFPMKFTV 63

Query: 267 D--AALQDSLTLVMMIRTKSLIGDRDVASVRYPVMQMIRTYVTNSP----APAVESATSL 428
           D  AA Q+ LTL   +R +  +GD+D+  V  P+ +++     + P    +  V   +  
Sbjct: 64  DESAAQQNRLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQFVSYQVRKPSGK 123

Query: 429 SGGGLKFSYQF 461
             G L  SY+F
Sbjct: 124 PKGELNLSYKF 134


>ref|XP_002330342.1| predicted protein [Populus trichocarpa]
           gi|224123120|ref|XP_002330343.1| predicted protein
           [Populus trichocarpa] gi|224146536|ref|XP_002336315.1|
           predicted protein [Populus trichocarpa]
           gi|222834629|gb|EEE73092.1| predicted protein [Populus
           trichocarpa] gi|222871546|gb|EEF08677.1| predicted
           protein [Populus trichocarpa]
           gi|222871547|gb|EEF08678.1| predicted protein [Populus
           trichocarpa]
          Length = 300

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
 Frame = +3

Query: 87  TLHLTIISAEGLKDINYITKMRTYVEVSIVG--GTQAHKQRTLTDMD--GGTSPTWNCPM 254
           TL + +ISA GLKD+NYI+KM  Y  VSI G    Q  KQ+T T +D  GG +PTWN P+
Sbjct: 5   TLEINVISARGLKDVNYISKMDVYAVVSISGDDSKQKPKQKTKTPVDRAGGKNPTWNFPI 64

Query: 255 SFTFDAA--LQDSLTLVMMIRTKSLIGDRDVASVRYPVMQMIRTYVTNSPAPAVESATSL 428
            FT       ++ L LV  ++ +  +GD+DV  V  PV +++            +SA   
Sbjct: 65  KFTIPQTPLAENRLNLVCNLKCERALGDKDVGEVNVPVKELL------------DSAG-- 110

Query: 429 SGGGLKF-SYQFEIGTGTAPMSYGQLSYNQSSSLFKLAANTTVVVGKIALFLVQAAGN 599
            G  +KF SYQ    +G      G++S++     FK +    VVV +++      A N
Sbjct: 111 DGKSMKFVSYQVRKPSGKPK---GEVSFS-----FKFSGIEKVVVPEVSTAAAAKATN 160


>ref|XP_002315561.1| predicted protein [Populus trichocarpa] gi|222864601|gb|EEF01732.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
 Frame = +3

Query: 87  TLHLTIISAEGLKDINYITKMRTYVEVSIVG--GTQAHKQRTLT--DMDGGTSPTWNCPM 254
           TL + +ISA  LKD+NYI+KM  Y  VSI G    Q  KQ+T T  D DGG +PTWN P+
Sbjct: 5   TLEINVISARDLKDVNYISKMDVYAVVSISGVDSKQQPKQKTKTPVDRDGGKNPTWNFPI 64

Query: 255 SFTF--DAALQDSLTLVMMIRTKSLIGDRDVASVRYPVMQMI 374
            FT    +  ++ L+LV  ++ +  +GD+D+  V  P+ +++
Sbjct: 65  KFTIPETSLAENHLSLVFKLKCERALGDKDIGEVNVPIKELL 106


>ref|XP_002516905.1| conserved hypothetical protein [Ricinus communis]
           gi|223543993|gb|EEF45519.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
 Frame = +3

Query: 87  TLHLTIISAEGLKDINYITKMRTYVEVSIVGGTQAHKQRTLT--DMDGGTSPTWNCPMSF 260
           TL + +ISA+ LKD+N  +KM  Y  +SI G +Q  KQ+T T  D DGG +PTWN P  F
Sbjct: 5   TLEIKLISAKDLKDVNLFSKMDVYAVLSISGDSQQPKQKTKTPVDHDGGINPTWNFPAKF 64

Query: 261 TF--DAALQDSLTLVMMIRTKSLIGDRDVASVRYPVMQMIRTYVTNSPAP-----AVESA 419
                 A Q+ L L + +R +  +GD+DV  V  P+ +++ +   +  +       V   
Sbjct: 65  IIIETPAQQNRLNLDIKLRCERALGDKDVGEVHVPIKELLDSINGDGNSMQFVNYQVRKP 124

Query: 420 TSLSGGGLKFSYQF 461
           +  S G L FS++F
Sbjct: 125 SGKSKGELSFSFKF 138


>gb|AFW84033.1| src2-like protein [Zea mays]
          Length = 354

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
 Frame = +3

Query: 87  TLHLTIISAEGLKDINYITKMRTYVEVSIVGGTQAHKQRTLTDMDGGTSPTWNCPMSFTF 266
           +L LT+IS + LKD+N +++M  Y  VS+ G  ++ +QR   D  GG +PTWN  + F  
Sbjct: 5   SLELTLISGKDLKDVNLMSRMEVYAVVSLSGDPRS-RQRVQADRTGGRNPTWNATLRFAV 63

Query: 267 DAALQDSLTLVMMIRTKSLIGDRDVASVRYPVMQMIRTYVTNSPAPAVESATSL----SG 434
            A    SL   +++R +  +GDRDV  V  P+ +++ +   + P PA   A  +    SG
Sbjct: 64  PATGAGSLH--VLLRAERALGDRDVGEVHIPLSELL-SGAPDGPVPAKFVAYQVRKISSG 120

Query: 435 ---GGLKFSYQF-EIGTGTAPMSYGQLSY 509
              G L  SY+  E+  G AP S  Q +Y
Sbjct: 121 KPQGVLNLSYKLGEVANGYAPASAAQSAY 149


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