BLASTX nr result

ID: Bupleurum21_contig00009967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009967
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19230.3| unnamed protein product [Vitis vinifera]              430   e-118
ref|XP_002283927.2| PREDICTED: transport inhibitor response 1-li...   430   e-118
ref|XP_002306554.1| f-box family protein [Populus trichocarpa] g...   425   e-117
ref|XP_002514006.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   425   e-117
gb|AAK16647.1|AF139835_1 F-box containing protein TIR1 [Populus ...   422   e-116

>emb|CBI19230.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  430 bits (1106), Expect = e-118
 Identities = 205/247 (82%), Positives = 229/247 (92%)
 Frame = -1

Query: 741  TSLNFSYANITANQLKPVIRHCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPIDAT 562
            TSLNFSYANI   QLK VI HCHKLQIFWVLDS+CDEGLQAVAATCK+LRELRVFPIDA 
Sbjct: 273  TSLNFSYANINTEQLKSVICHCHKLQIFWVLDSVCDEGLQAVAATCKELRELRVFPIDAR 332

Query: 561  EDNDGPVSDVGLHAISEGCKKLESILYFCQQMTNAAVISMSINCPDLVVFRLCIIGRYRP 382
            ED++GPVS+VGL AISEGC+KL+SILYFCQ+MTNAAVI+MS NCPDLVVFRLCI+GR+RP
Sbjct: 333  EDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVIAMSKNCPDLVVFRLCIMGRHRP 392

Query: 381  DHSTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFSYIGEYGKLVRTLSVAFAGDSDMG 202
            DH TGEPMDEGFGAIV NCKKLTRLA+SGLLTD+AFSYIG+YGKLVRTLSVAFAGDSDMG
Sbjct: 393  DHITGEPMDEGFGAIVMNCKKLTRLAISGLLTDKAFSYIGKYGKLVRTLSVAFAGDSDMG 452

Query: 201  LKYVLEGCSKLEKLEIRDCPFGDSALLSGLHHYHNMRFLWMSTCRVTRHGCKEIALQIPR 22
            LKYVLEGC KL+KLEIRD PFGD+AL SGLHHY+NMRFLWMS+CR++R GC+EIA  +P 
Sbjct: 453  LKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLSRQGCEEIARAMPG 512

Query: 21   VIVEVFR 1
            ++VEV R
Sbjct: 513  LVVEVIR 519


>ref|XP_002283927.2| PREDICTED: transport inhibitor response 1-like protein [Vitis
            vinifera] gi|147845617|emb|CAN80598.1| hypothetical
            protein VITISV_002642 [Vitis vinifera]
          Length = 601

 Score =  430 bits (1106), Expect = e-118
 Identities = 205/247 (82%), Positives = 229/247 (92%)
 Frame = -1

Query: 741  TSLNFSYANITANQLKPVIRHCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPIDAT 562
            TSLNFSYANI   QLK VI HCHKLQIFWVLDS+CDEGLQAVAATCK+LRELRVFPIDA 
Sbjct: 322  TSLNFSYANINTEQLKSVICHCHKLQIFWVLDSVCDEGLQAVAATCKELRELRVFPIDAR 381

Query: 561  EDNDGPVSDVGLHAISEGCKKLESILYFCQQMTNAAVISMSINCPDLVVFRLCIIGRYRP 382
            ED++GPVS+VGL AISEGC+KL+SILYFCQ+MTNAAVI+MS NCPDLVVFRLCI+GR+RP
Sbjct: 382  EDSEGPVSEVGLQAISEGCRKLQSILYFCQRMTNAAVIAMSKNCPDLVVFRLCIMGRHRP 441

Query: 381  DHSTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFSYIGEYGKLVRTLSVAFAGDSDMG 202
            DH TGEPMDEGFGAIV NCKKLTRLA+SGLLTD+AFSYIG+YGKLVRTLSVAFAGDSDMG
Sbjct: 442  DHITGEPMDEGFGAIVMNCKKLTRLAISGLLTDKAFSYIGKYGKLVRTLSVAFAGDSDMG 501

Query: 201  LKYVLEGCSKLEKLEIRDCPFGDSALLSGLHHYHNMRFLWMSTCRVTRHGCKEIALQIPR 22
            LKYVLEGC KL+KLEIRD PFGD+AL SGLHHY+NMRFLWMS+CR++R GC+EIA  +P 
Sbjct: 502  LKYVLEGCPKLQKLEIRDSPFGDAALRSGLHHYYNMRFLWMSSCRLSRQGCEEIARAMPG 561

Query: 21   VIVEVFR 1
            ++VEV R
Sbjct: 562  LVVEVIR 568


>ref|XP_002306554.1| f-box family protein [Populus trichocarpa]
            gi|222856003|gb|EEE93550.1| f-box family protein [Populus
            trichocarpa]
          Length = 635

 Score =  425 bits (1093), Expect = e-117
 Identities = 198/247 (80%), Positives = 230/247 (93%)
 Frame = -1

Query: 741  TSLNFSYANITANQLKPVIRHCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPIDAT 562
            TSLNFSYA ++A QLKP+I +CHKLQIFWVLDSICDEGLQAVAATCK+LRELRVFP+D  
Sbjct: 355  TSLNFSYAEVSAEQLKPIISNCHKLQIFWVLDSICDEGLQAVAATCKELRELRVFPVDPR 414

Query: 561  EDNDGPVSDVGLHAISEGCKKLESILYFCQQMTNAAVISMSINCPDLVVFRLCIIGRYRP 382
            ED +GPVS+VGL AISEGC+KL+SILYFC +MTNAAV++MS NCPDLVVFRLCI+GR++P
Sbjct: 415  EDIEGPVSEVGLQAISEGCRKLQSILYFCHRMTNAAVVAMSKNCPDLVVFRLCIMGRHQP 474

Query: 381  DHSTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFSYIGEYGKLVRTLSVAFAGDSDMG 202
            DH TGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAF+YIG+YGK+VRTLSVAFAGDSDMG
Sbjct: 475  DHVTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFAYIGKYGKIVRTLSVAFAGDSDMG 534

Query: 201  LKYVLEGCSKLEKLEIRDCPFGDSALLSGLHHYHNMRFLWMSTCRVTRHGCKEIALQIPR 22
            LKYVLEGC +L+KLEIRD PFGD+ALLSGLHHY+NMRFLWMS C+++R GC++IA  +PR
Sbjct: 535  LKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWMSACKLSRQGCQQIAQALPR 594

Query: 21   VIVEVFR 1
            ++VEV +
Sbjct: 595  LVVEVIK 601


>ref|XP_002514006.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
            gi|223547092|gb|EEF48589.1| TRANSPORT INHIBITOR RESPONSE
            1 protein, putative [Ricinus communis]
          Length = 635

 Score =  425 bits (1092), Expect = e-117
 Identities = 202/244 (82%), Positives = 227/244 (93%)
 Frame = -1

Query: 738  SLNFSYANITANQLKPVIRHCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPIDATE 559
            SLN SYANITA+QLKP+I +CHKLQ FWVLDSICDEGLQAVAATCK+LRELRVFPIDA E
Sbjct: 356  SLNLSYANITADQLKPIISNCHKLQTFWVLDSICDEGLQAVAATCKELRELRVFPIDARE 415

Query: 558  DNDGPVSDVGLHAISEGCKKLESILYFCQQMTNAAVISMSINCPDLVVFRLCIIGRYRPD 379
            D++GPVS+VGL AISEGC+KL+SILYFCQ MTNAAVI+MS NCPDLVVFRLCI+GR+RPD
Sbjct: 416  DSEGPVSEVGLQAISEGCRKLQSILYFCQHMTNAAVIAMSKNCPDLVVFRLCIMGRHRPD 475

Query: 378  HSTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFSYIGEYGKLVRTLSVAFAGDSDMGL 199
              TGEPMDEGFGAIV NCKKL+RLAVSGLLTDRAFSYIGEYGK VRTLSVAFAGDSDMGL
Sbjct: 476  RVTGEPMDEGFGAIVMNCKKLSRLAVSGLLTDRAFSYIGEYGKTVRTLSVAFAGDSDMGL 535

Query: 198  KYVLEGCSKLEKLEIRDCPFGDSALLSGLHHYHNMRFLWMSTCRVTRHGCKEIALQIPRV 19
            KY+LEGC KL+KLEIRD PFGD ALLSGLHHY+NMRFLWMS C++TR+GC++IA ++P +
Sbjct: 536  KYLLEGCPKLQKLEIRDSPFGDGALLSGLHHYYNMRFLWMSACKLTRNGCQQIARELPGL 595

Query: 18   IVEV 7
            +VEV
Sbjct: 596  VVEV 599


>gb|AAK16647.1|AF139835_1 F-box containing protein TIR1 [Populus tremula x Populus tremuloides]
          Length = 635

 Score =  422 bits (1086), Expect = e-116
 Identities = 196/247 (79%), Positives = 230/247 (93%)
 Frame = -1

Query: 741  TSLNFSYANITANQLKPVIRHCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPIDAT 562
            TSLNFS+A+++A QLKP+I +CHKLQIFWVLDSICDEGLQAVAATCK+LRELRVFP+D  
Sbjct: 355  TSLNFSFADVSAEQLKPIISNCHKLQIFWVLDSICDEGLQAVAATCKELRELRVFPVDPR 414

Query: 561  EDNDGPVSDVGLHAISEGCKKLESILYFCQQMTNAAVISMSINCPDLVVFRLCIIGRYRP 382
            ED +GPVS+VGL AISEGC+KL+SILYFC +MTNAAV++MS NCPDLVVFRLCI+GR++P
Sbjct: 415  EDIEGPVSEVGLQAISEGCRKLQSILYFCHRMTNAAVVAMSKNCPDLVVFRLCIMGRHQP 474

Query: 381  DHSTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFSYIGEYGKLVRTLSVAFAGDSDMG 202
            DH TGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAF+YIG+YGK+VRTLSVAFAGDSDMG
Sbjct: 475  DHVTGEPMDEGFGAIVKNCKKLTRLAVSGLLTDRAFAYIGKYGKIVRTLSVAFAGDSDMG 534

Query: 201  LKYVLEGCSKLEKLEIRDCPFGDSALLSGLHHYHNMRFLWMSTCRVTRHGCKEIALQIPR 22
            LKYVLEGC +L+KLEIRD PFGD+ALLSGLHHY+NMRFLWMS C+++R GC++I   +PR
Sbjct: 535  LKYVLEGCPRLQKLEIRDSPFGDAALLSGLHHYYNMRFLWMSACKLSRQGCQQITQALPR 594

Query: 21   VIVEVFR 1
            ++VEV +
Sbjct: 595  LVVEVIK 601


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