BLASTX nr result

ID: Bupleurum21_contig00009912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009912
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   232   4e-59
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   228   1e-57
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...   228   1e-57
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2...   228   1e-57
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56

>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  232 bits (592), Expect = 4e-59
 Identities = 112/135 (82%), Positives = 124/135 (91%)
 Frame = +3

Query: 3   ARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQESIYRQRNPHNSGVQGNGRGQERLI 182
           ARQAYL+GNKALAKELSVKGQLHNM MKAAH KAQESIYR RNP +S +QGNGRG ER+I
Sbjct: 443 ARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRLRNPISSEMQGNGRGHERMI 502

Query: 183 DLHGLHVNEAIHVLKRDLAMLRSAARSTDQRLQVYICVGTGHHTRGSRTPSRLPTAVQRY 362
           DLHGLHV+EAIHVLK +L++LRS AR+ DQRLQVYICVGTGHHTRGSRTP+RLP AVQ+Y
Sbjct: 503 DLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICVGTGHHTRGSRTPARLPIAVQQY 562

Query: 363 LLEEEGLDFAEPQPG 407
           LLEEEGLD+ EPQPG
Sbjct: 563 LLEEEGLDYTEPQPG 577


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  228 bits (580), Expect = 1e-57
 Identities = 110/135 (81%), Positives = 122/135 (90%)
 Frame = +3

Query: 3   ARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQESIYRQRNPHNSGVQGNGRGQERLI 182
           ARQAYL+GNKALAKELSVKGQLHNM MKAAH +AQESIYRQRN      QGNGRG ER+I
Sbjct: 437 ARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRNHLGGDNQGNGRGHERMI 496

Query: 183 DLHGLHVNEAIHVLKRDLAMLRSAARSTDQRLQVYICVGTGHHTRGSRTPSRLPTAVQRY 362
           DLHGLHV+EAIHVLK +L++LRS AR++ QRLQVYICVGTGHHTRGSRTP+RLP AVQRY
Sbjct: 497 DLHGLHVSEAIHVLKHELSVLRSTARASGQRLQVYICVGTGHHTRGSRTPARLPVAVQRY 556

Query: 363 LLEEEGLDFAEPQPG 407
           L+EEEGLDF+EPQPG
Sbjct: 557 LIEEEGLDFSEPQPG 571


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  228 bits (580), Expect = 1e-57
 Identities = 110/135 (81%), Positives = 122/135 (90%)
 Frame = +3

Query: 3   ARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQESIYRQRNPHNSGVQGNGRGQERLI 182
           ARQAYL+GNKALAKELSVKGQLHNM MKAAH +AQESIYRQRN      QGNGRG ER+I
Sbjct: 437 ARQAYLIGNKALAKELSVKGQLHNMHMKAAHGRAQESIYRQRNHLGGDNQGNGRGHERMI 496

Query: 183 DLHGLHVNEAIHVLKRDLAMLRSAARSTDQRLQVYICVGTGHHTRGSRTPSRLPTAVQRY 362
           DLHGLHV+EAIHVLK +L++LRS AR++ QRLQVYICVGTGHHTRGSRTP+RLP AVQRY
Sbjct: 497 DLHGLHVSEAIHVLKHELSVLRSTARASGQRLQVYICVGTGHHTRGSRTPARLPVAVQRY 556

Query: 363 LLEEEGLDFAEPQPG 407
           L+EEEGLDF+EPQPG
Sbjct: 557 LIEEEGLDFSEPQPG 571


>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  228 bits (580), Expect = 1e-57
 Identities = 109/135 (80%), Positives = 120/135 (88%)
 Frame = +3

Query: 3   ARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQESIYRQRNPHNSGVQGNGRGQERLI 182
           ARQAYL+GNKALAKELS KGQLHNM MK AH KAQESIYRQRNP +  +QG GRG ER+I
Sbjct: 442 ARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIYRQRNPASLEMQGTGRGHERMI 501

Query: 183 DLHGLHVNEAIHVLKRDLAMLRSAARSTDQRLQVYICVGTGHHTRGSRTPSRLPTAVQRY 362
           DLHGLHV EAIHVLK +L++LRS AR+ DQRLQVYICVGTGHHTRG+RTP+RLP AVQRY
Sbjct: 502 DLHGLHVTEAIHVLKHELSILRSTARAADQRLQVYICVGTGHHTRGARTPARLPVAVQRY 561

Query: 363 LLEEEGLDFAEPQPG 407
           LLEEEGLD+ EPQPG
Sbjct: 562 LLEEEGLDYTEPQPG 576


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  223 bits (568), Expect = 3e-56
 Identities = 107/135 (79%), Positives = 119/135 (88%)
 Frame = +3

Query: 3   ARQAYLVGNKALAKELSVKGQLHNMQMKAAHAKAQESIYRQRNPHNSGVQGNGRGQERLI 182
           ARQAYL+GNKALAKELSVKGQLHNM MK AH KAQESIY QRNP +  +QG GRG E++I
Sbjct: 440 ARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQESIYHQRNPVSLEMQGTGRGHEQMI 499

Query: 183 DLHGLHVNEAIHVLKRDLAMLRSAARSTDQRLQVYICVGTGHHTRGSRTPSRLPTAVQRY 362
           DLHGLHV EAIHVLK +L++LRS A++ DQRLQVYICVGTGHHTRGSRTP+RLP AVQRY
Sbjct: 500 DLHGLHVTEAIHVLKHELSVLRSTAQAADQRLQVYICVGTGHHTRGSRTPARLPVAVQRY 559

Query: 363 LLEEEGLDFAEPQPG 407
           LLEEEGLD+ EP PG
Sbjct: 560 LLEEEGLDYTEPHPG 574


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