BLASTX nr result

ID: Bupleurum21_contig00009852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009852
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519004.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
gb|AFK47914.1| unknown [Lotus japonicus]                               91   1e-16
emb|CBI31242.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250...    86   2e-15
tpg|DAA46512.1| TPA: hypothetical protein ZEAMMB73_617437 [Zea m...    82   6e-14

>ref|XP_002519004.1| conserved hypothetical protein [Ricinus communis]
           gi|223541991|gb|EEF43537.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 63/125 (50%), Positives = 76/125 (60%), Gaps = 9/125 (7%)
 Frame = -3

Query: 348 QGFLKKTP--KNPPKILNNYAQPLHNRH--NVPKSLSPISVIHSNSKFLQV----GHTTR 193
           Q F+  TP  K  P + N      +  H  N+ KS  PI  +  NS+FLQ+      ++R
Sbjct: 34  QPFVSTTPYSKASPVVFNGLQTIRYRYHSSNLHKSSVPIRFLEPNSRFLQMECQDNSSSR 93

Query: 192 PVLVKXXXXXXXXXSNGL-ESVVGVVHLIVSLGIILAMDKFLKKAFVAAAIKFPSALFGM 16
               K         S+ L +SV GV+HL+VSLGIILAMDK LKKAFVAAAIKFPSALFGM
Sbjct: 94  KFSTKSLSSDGSATSSTLSQSVFGVLHLLVSLGIILAMDKLLKKAFVAAAIKFPSALFGM 153

Query: 15  FCIFS 1
           FCIFS
Sbjct: 154 FCIFS 158


>gb|AFK47914.1| unknown [Lotus japonicus]
          Length = 226

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 59/144 (40%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
 Frame = -3

Query: 414 MATLSALPKIPSFSFTSSRIFSQG--FLKKTPKNPPKILNNYAQPLHNRHNVPKSLSPIS 241
           MAT S   ++ S+S  ++        F ++   N   +  N    +  R  +  + +PI 
Sbjct: 1   MATHSGTAQVLSYSVLTNHSLKPPSLFHRRVSVNSIPLALNGVLCIEKRSFLSNTATPIR 60

Query: 240 VIHSNSKFLQVGHT----TRPVLVKXXXXXXXXXSNGLESVVGVVHLIVSLGIILAMDKF 73
               NS FLQ+G      +R +            S+  +SV G+ HLIVSLG+I+AMDKF
Sbjct: 61  PFRFNSSFLQMGSQGNCQSRDISTNSAGSETGSTSSLTQSVFGLSHLIVSLGLIIAMDKF 120

Query: 72  LKKAFVAAAIKFPSALFGMFCIFS 1
           LK+AFVAAAIKFPSALFGMFCIFS
Sbjct: 121 LKQAFVAAAIKFPSALFGMFCIFS 144


>emb|CBI31242.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/71 (66%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
 Frame = -3

Query: 204 HTTRPVL---VKXXXXXXXXXSNGLESVVGVVHLIVSLGIILAMDKFLKKAFVAAAIKFP 34
           H +RP+    VK           GL+SV GV+HL+VSLGIILAMDK LKKAFVAAAIKFP
Sbjct: 4   HKSRPLRRFQVKSMGTDSGSTPLGLQSVFGVLHLVVSLGIILAMDKLLKKAFVAAAIKFP 63

Query: 33  SALFGMFCIFS 1
           SALFGMFCIF+
Sbjct: 64  SALFGMFCIFT 74


>ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250226 [Vitis vinifera]
          Length = 434

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = -3

Query: 144 GLESVVGVVHLIVSLGIILAMDKFLKKAFVAAAIKFPSALFGMFCIFS 1
           GL+SV GV+HL+VSLGIILAMDK LKKAFVAAAIKFPSALFGMFCIF+
Sbjct: 11  GLQSVFGVLHLVVSLGIILAMDKLLKKAFVAAAIKFPSALFGMFCIFT 58


>tpg|DAA46512.1| TPA: hypothetical protein ZEAMMB73_617437 [Zea mays]
          Length = 315

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/47 (78%), Positives = 45/47 (95%)
 Frame = -3

Query: 141 LESVVGVVHLIVSLGIILAMDKFLKKAFVAAAIKFPSALFGMFCIFS 1
           L +++GV HL+VSLGI+LAMDKFLK+AFVAA+IKFPSALFGMFC+FS
Sbjct: 119 LPAIIGVAHLLVSLGILLAMDKFLKQAFVAASIKFPSALFGMFCVFS 165


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