BLASTX nr result

ID: Bupleurum21_contig00009821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009821
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527797.1| conserved hypothetical protein [Ricinus comm...   100   4e-19
ref|XP_002315875.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
gb|ABK96329.1| unknown [Populus trichocarpa x Populus deltoides]       97   3e-18
emb|CBI39502.3| unnamed protein product [Vitis vinifera]               75   6e-18
ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...    75   6e-18

>ref|XP_002527797.1| conserved hypothetical protein [Ricinus communis]
           gi|223532832|gb|EEF34607.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 50/62 (80%), Positives = 57/62 (91%)
 Frame = +1

Query: 1   RFLVSVTVMGSAGPIRFVVNEKELVASVIDTALKSYAREGRLPILGTNLDSFVLYSPIAG 180
           RFL+SVTV+GSAGPIRFVVNE+ELVASVIDTALKSYAREGRLPILG++L+ F LY   AG
Sbjct: 17  RFLISVTVLGSAGPIRFVVNEEELVASVIDTALKSYAREGRLPILGSDLNDFFLYCANAG 76

Query: 181 TE 186
           +E
Sbjct: 77  SE 78


>ref|XP_002315875.1| predicted protein [Populus trichocarpa] gi|222864915|gb|EEF02046.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 46/62 (74%), Positives = 58/62 (93%)
 Frame = +1

Query: 1   RFLVSVTVMGSAGPIRFVVNEKELVASVIDTALKSYAREGRLPILGTNLDSFVLYSPIAG 180
           RFL+SVTV+GSAGPIRFVVNE++LV +VI+TALKSYAREGRLPILG++L+ F+LY P AG
Sbjct: 16  RFLISVTVLGSAGPIRFVVNEEDLVVAVINTALKSYAREGRLPILGSDLNDFLLYCPNAG 75

Query: 181 TE 186
           ++
Sbjct: 76  SD 77


>gb|ABK96329.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 133

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 46/62 (74%), Positives = 58/62 (93%)
 Frame = +1

Query: 1   RFLVSVTVMGSAGPIRFVVNEKELVASVIDTALKSYAREGRLPILGTNLDSFVLYSPIAG 180
           RFL+SVTV+GSAGPIRFVVNE++LV +VI+TALKSYAREGRLPILG++L+ F+LY P AG
Sbjct: 16  RFLISVTVLGSAGPIRFVVNEEDLVVAVINTALKSYAREGRLPILGSDLNDFLLYCPDAG 75

Query: 181 TE 186
           ++
Sbjct: 76  SD 77


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score = 74.7 bits (182), Expect(2) = 6e-18
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
 Frame = +3

Query: 246 CDVCIKGPPEMQNLKNEAKLFMKXXXXXXXXXXXXDDSNSLIVSGASEEVRHKEMPILKI 425
           CDVC+ GPPE QNLK+EA  FM             DD    ++ G  E+ R  + P L++
Sbjct: 653 CDVCVNGPPEKQNLKDEADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRM 712

Query: 426 ----VRDIQKQKYGGKGDLWWIGFARILKDKGFIRE 521
               +R+ Q QK+     LWW G ARI++DKG+IRE
Sbjct: 713 LVSRIRE-QFQKFAATDLLWWRGLARIMEDKGYIRE 747



 Score = 41.6 bits (96), Expect(2) = 6e-18
 Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = +2

Query: 527 DMEHVQINAPEPTELGLEFLQS--DQPFIVYPE 619
           D  HVQI  P+PT+LGLEFLQS  +Q F VYP+
Sbjct: 750 DRIHVQIKFPKPTKLGLEFLQSTTEQTFDVYPQ 782


>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score = 74.7 bits (182), Expect(2) = 6e-18
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
 Frame = +3

Query: 246 CDVCIKGPPEMQNLKNEAKLFMKXXXXXXXXXXXXDDSNSLIVSGASEEVRHKEMPILKI 425
           CDVC+ GPPE QNLK+EA  FM             DD    ++ G  E+ R  + P L++
Sbjct: 694 CDVCVNGPPEKQNLKDEADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNLRM 753

Query: 426 ----VRDIQKQKYGGKGDLWWIGFARILKDKGFIRE 521
               +R+ Q QK+     LWW G ARI++DKG+IRE
Sbjct: 754 LVSRIRE-QFQKFAATDLLWWRGLARIMEDKGYIRE 788



 Score = 41.6 bits (96), Expect(2) = 6e-18
 Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = +2

Query: 527 DMEHVQINAPEPTELGLEFLQS--DQPFIVYPE 619
           D  HVQI  P+PT+LGLEFLQS  +Q F VYP+
Sbjct: 791 DRIHVQIKFPKPTKLGLEFLQSTTEQTFDVYPQ 823


Top