BLASTX nr result

ID: Bupleurum21_contig00009797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009797
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana taba...   152   4e-35
gb|AFK45871.1| unknown [Medicago truncatula]                          151   7e-35
ref|XP_003629227.1| ELAV-like protein [Medicago truncatula] gi|3...   151   7e-35
ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putati...   150   2e-34
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...   149   3e-34

>emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
          Length = 235

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/82 (91%), Positives = 79/82 (96%)
 Frame = +1

Query: 190 EVVNPGNTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRSRISRGFAFITMDSLED 369
           EV NPGNTLYVTGLSTRVTERDLE+HF+KEGKV S FLVVEPRSRISRGFAFITMDSLED
Sbjct: 60  EVSNPGNTLYVTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLED 119

Query: 370 ADRCIKHLNQSVLEGRYITVER 435
           A+RCIKHLNQSVLEGRYITVE+
Sbjct: 120 ANRCIKHLNQSVLEGRYITVEK 141


>gb|AFK45871.1| unknown [Medicago truncatula]
          Length = 270

 Score =  151 bits (381), Expect = 7e-35
 Identities = 72/79 (91%), Positives = 78/79 (98%)
 Frame = +1

Query: 199 NPGNTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRSRISRGFAFITMDSLEDADR 378
           NPGNTLYVTGLS+RVT+RDLEDHF+KEGKVASCFLVVEPR+RISRGFAF+TMDS EDA+R
Sbjct: 59  NPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAER 118

Query: 379 CIKHLNQSVLEGRYITVER 435
           CIKHLNQSVLEGRYITVER
Sbjct: 119 CIKHLNQSVLEGRYITVER 137


>ref|XP_003629227.1| ELAV-like protein [Medicago truncatula] gi|355523249|gb|AET03703.1|
           ELAV-like protein [Medicago truncatula]
          Length = 270

 Score =  151 bits (381), Expect = 7e-35
 Identities = 72/79 (91%), Positives = 78/79 (98%)
 Frame = +1

Query: 199 NPGNTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRSRISRGFAFITMDSLEDADR 378
           NPGNTLYVTGLS+RVT+RDLEDHF+KEGKVASCFLVVEPR+RISRGFAF+TMDS EDA+R
Sbjct: 59  NPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAER 118

Query: 379 CIKHLNQSVLEGRYITVER 435
           CIKHLNQSVLEGRYITVER
Sbjct: 119 CIKHLNQSVLEGRYITVER 137


>ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223529816|gb|EEF31751.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 248

 Score =  150 bits (378), Expect = 2e-34
 Identities = 71/83 (85%), Positives = 80/83 (96%)
 Frame = +1

Query: 187 TEVVNPGNTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRSRISRGFAFITMDSLE 366
           TE VNPGNTLYVTGLSTRVTER LE+HF KEGKVASCFLVVEPR+RISRGFAF+TMD++E
Sbjct: 67  TEAVNPGNTLYVTGLSTRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMDNVE 126

Query: 367 DADRCIKHLNQSVLEGRYITVER 435
           DA+RC+K+LNQSVLEGRYITVE+
Sbjct: 127 DANRCVKYLNQSVLEGRYITVEK 149


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score =  149 bits (376), Expect = 3e-34
 Identities = 68/79 (86%), Positives = 79/79 (100%)
 Frame = +1

Query: 199 NPGNTLYVTGLSTRVTERDLEDHFNKEGKVASCFLVVEPRSRISRGFAFITMDSLEDADR 378
           NPGNTLYVTGLSTRVTERDLE+HF+KEGKVASCFLVVEPR+RISRGFAF+TMD+++DA+R
Sbjct: 62  NPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121

Query: 379 CIKHLNQSVLEGRYITVER 435
           C+KHLNQS+LEGRYITVE+
Sbjct: 122 CVKHLNQSILEGRYITVEK 140


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