BLASTX nr result
ID: Bupleurum21_contig00009765
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00009765
(1547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909... 584 e-164
ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arab... 584 e-164
ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis t... 581 e-163
gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria] gi|3... 581 e-163
ref|XP_002321154.1| predicted protein [Populus trichocarpa] gi|2... 579 e-163
>ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1
homolog [Solanum lycopersicum]
Length = 677
Score = 584 bits (1505), Expect = e-164
Identities = 301/484 (62%), Positives = 357/484 (73%), Gaps = 5/484 (1%)
Frame = -3
Query: 1437 GGASRIEIDKELLCPICMQIMKGAFLTACGHSFCYKCINTHLENKDDCPCCGKSLSANQL 1258
G + E+D+ELLCPICMQI+K AFLTACGHSFCY CI THL NK DCPCC L+ +QL
Sbjct: 38 GTVTEWELDRELLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQL 97
Query: 1257 FPNFVLDKLLKKASTRQIPKTVSTAEQFQWALQKGCEVSVKELDVLLSVLAERKRILERE 1078
+PNF+LDKLLKK S RQI KT S EQF+ +L++G EVS+KELD LL +L+E+KR LE+E
Sbjct: 98 YPNFLLDKLLKKTSARQISKTASPVEQFRHSLEQGSEVSIKELDALLLMLSEKKRKLEQE 157
Query: 1077 ESERNMQIXXXXXXXXXXXRVDELKELQSDLEYVKEDINVVESSRIEKCRVRNKLSPELQ 898
E+ERNMQI +VDEL E+Q DL+Y+KED+N VE RI+ R R++ S +L+
Sbjct: 158 EAERNMQILLDFLQMLRKQKVDELNEVQHDLQYIKEDLNSVERHRIDLYRARDRYSMKLR 217
Query: 897 MSRNDFSTTRSQFXXXXXXXXXXXXXXXXXXXXXSPWNFLYNKMAGKNQASALGPHKND- 721
M +D + N + K+ K Q S+ GP + D
Sbjct: 218 MLADDPIGKKPWSSSTDRNFGGLFSTSQNAPGGLPTGNLTFKKVDSKAQISSPGPQRKDT 277
Query: 720 SISIPKPKHTSQSGLSLVRKKRVHSQFNELQECYLQKRRXXXXXXXXXXXXXQ----REG 553
SIS +H SQSGL++VRKKRV++QFN+LQECYLQKRR REG
Sbjct: 278 SISELNSQHMSQSGLAVVRKKRVNAQFNDLQECYLQKRRQLANKSRVKEEKDADVVQREG 337
Query: 552 YSAALSDFQSVLTTFTRYSRMRVIAEVKHGDLMHTNNIVSSIEFDRDDELFATAGVLRCI 373
YS L+DFQSVL+TFTRYSR+RVIAE++HGDL H+ NIVSSIEFDRDDELFATAGV R I
Sbjct: 338 YSEGLADFQSVLSTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRI 397
Query: 372 KVFDFASVVNEPARLHLPVVELSTQFKLSCLSWNKYTKNSLASSDYEGIVTVWDMNTKQS 193
KVFDF+SVVNEPA H PVVE+ST+ KLSCLSWNKYTKN +ASSDY+GIVTVWD+ T+QS
Sbjct: 398 KVFDFSSVVNEPADAHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYDGIVTVWDVTTRQS 457
Query: 192 VIEYEEHEKRAWSVDFSCTEPSMLVSGGDDCKVKVWSTKQESSVLNIDMKANICCVKYNP 13
V+EYEEHEKRAWSVDFS TEPSMLVSG DDCKVKVW TKQE+SVLNIDMKANICCVKYNP
Sbjct: 458 VMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKYNP 517
Query: 12 GSSI 1
GSS+
Sbjct: 518 GSSV 521
>ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata] gi|297325264|gb|EFH55684.1| hypothetical protein
ARALYDRAFT_902362 [Arabidopsis lyrata subsp. lyrata]
Length = 675
Score = 584 bits (1505), Expect = e-164
Identities = 300/491 (61%), Positives = 362/491 (73%), Gaps = 8/491 (1%)
Frame = -3
Query: 1452 GGVSAGGASRIEIDKELLCPICMQIMKGAFLTACGHSFCYKCINTHLENKDDCPCCGKSL 1273
GG ++DK+LLCPICMQI+K AFLTACGHSFCY CI THL NK DCPCC + L
Sbjct: 34 GGDGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHL 93
Query: 1272 SANQLFPNFVLDKLLKKASTRQIPKTVSTAEQFQWALQKGCEVSVKELDVLLSVLAERKR 1093
+ NQL+PNF+LDKLLKK S RQ+ KT S +QF+ ALQ+GC+VS+KE+D LLS+LAERKR
Sbjct: 94 TNNQLYPNFLLDKLLKKTSARQVSKTASPLDQFREALQRGCDVSIKEVDNLLSLLAERKR 153
Query: 1092 ILEREESERNMQIXXXXXXXXXXXRVDELKELQSDLEYVKEDINVVESSRIEKCRVRNKL 913
+E+EE+ERNMQI +VDEL E+Q+DL+Y+KEDIN VE RI+ R R++
Sbjct: 154 KMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRY 213
Query: 912 SPELQMSRNDFSTTRSQFXXXXXXXXXXXXXXXXXXXXXSPWNFLYN----KMAGKNQAS 745
S +L+M +D ST + NFL N K+ GK Q S
Sbjct: 214 SVKLRMLGDDPSTRNA------WPHEKNQSGFNSNSLSVRGGNFLGNYQNKKVEGKAQGS 267
Query: 744 ALGPHKNDSISIPKPKHTSQSGLSLVRKKRVHSQFNELQECYLQKRRXXXXXXXXXXXXX 565
+ G K D++S + +QS +S+ RKKR+H+QFN+LQECYLQKRR
Sbjct: 268 SHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQKRRQLVDQPNSKQEND 327
Query: 564 Q----REGYSAALSDFQSVLTTFTRYSRMRVIAEVKHGDLMHTNNIVSSIEFDRDDELFA 397
+ REGYS L+DFQSVLTTFTRYSR+RVIAE++HGD+ H+ NIVSSIEFDRDDELFA
Sbjct: 328 KSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFA 387
Query: 396 TAGVLRCIKVFDFASVVNEPARLHLPVVELSTQFKLSCLSWNKYTKNSLASSDYEGIVTV 217
TAGV RCIKVFDF+SVVNEPA + P+VE+ST+ KLSCLSWNK+ KN +ASSDYEGIVTV
Sbjct: 388 TAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTV 447
Query: 216 WDMNTKQSVIEYEEHEKRAWSVDFSCTEPSMLVSGGDDCKVKVWSTKQESSVLNIDMKAN 37
WD+ T+QS++EYEEHEKRAWSVDFS TEPSMLVSG DDCKVKVW T+QE+SVLNIDMKAN
Sbjct: 448 WDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVLNIDMKAN 507
Query: 36 ICCVKYNPGSS 4
ICCVKYNPGSS
Sbjct: 508 ICCVKYNPGSS 518
>ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3
ubiquitin-protein ligase COP1; AltName: Full=Constitutive
photomorphogenesis protein 1 gi|2702280|gb|AAB91983.1|
COP1 regulatory protein [Arabidopsis thaliana]
gi|95147316|gb|ABF57293.1| At2g32950 [Arabidopsis
thaliana] gi|330253672|gb|AEC08766.1| E3
ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
Length = 675
Score = 581 bits (1497), Expect = e-163
Identities = 294/487 (60%), Positives = 359/487 (73%), Gaps = 4/487 (0%)
Frame = -3
Query: 1452 GGVSAGGASRIEIDKELLCPICMQIMKGAFLTACGHSFCYKCINTHLENKDDCPCCGKSL 1273
GG ++DK+LLCPICMQI+K AFLTACGHSFCY CI THL NK DCPCC + L
Sbjct: 34 GGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHL 93
Query: 1272 SANQLFPNFVLDKLLKKASTRQIPKTVSTAEQFQWALQKGCEVSVKELDVLLSVLAERKR 1093
+ NQL+PNF+LDKLLKK S R + KT S +QF+ ALQ+GC+VS+KE+D LL++LAERKR
Sbjct: 94 TNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKR 153
Query: 1092 ILEREESERNMQIXXXXXXXXXXXRVDELKELQSDLEYVKEDINVVESSRIEKCRVRNKL 913
+E+EE+ERNMQI +VDEL E+Q+DL+Y+KEDIN VE RI+ R R++
Sbjct: 154 KMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRY 213
Query: 912 SPELQMSRNDFSTTRSQFXXXXXXXXXXXXXXXXXXXXXSPWNFLYNKMAGKNQASALGP 733
S +L+M +D ST + N+ K+ GK Q S+ G
Sbjct: 214 SVKLRMLGDDPSTRNA--WPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGL 271
Query: 732 HKNDSISIPKPKHTSQSGLSLVRKKRVHSQFNELQECYLQKRRXXXXXXXXXXXXXQ--- 562
K D++S + +QS +S+ RKKR+H+QFN+LQECYLQKRR +
Sbjct: 272 PKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQKRRQLADQPNSKQENDKSVV 331
Query: 561 -REGYSAALSDFQSVLTTFTRYSRMRVIAEVKHGDLMHTNNIVSSIEFDRDDELFATAGV 385
REGYS L+DFQSVLTTFTRYSR+RVIAE++HGD+ H+ NIVSSIEFDRDDELFATAGV
Sbjct: 332 RREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGV 391
Query: 384 LRCIKVFDFASVVNEPARLHLPVVELSTQFKLSCLSWNKYTKNSLASSDYEGIVTVWDMN 205
RCIKVFDF+SVVNEPA + P+VE+ST+ KLSCLSWNK+ KN +ASSDYEGIVTVWD+
Sbjct: 392 SRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVT 451
Query: 204 TKQSVIEYEEHEKRAWSVDFSCTEPSMLVSGGDDCKVKVWSTKQESSVLNIDMKANICCV 25
T+QS++EYEEHEKRAWSVDFS TEPSMLVSG DDCKVKVW T+QE+SV+NIDMKANICCV
Sbjct: 452 TRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCV 511
Query: 24 KYNPGSS 4
KYNPGSS
Sbjct: 512 KYNPGSS 518
>gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa
subsp. chinensis]
Length = 676
Score = 581 bits (1497), Expect = e-163
Identities = 295/488 (60%), Positives = 361/488 (73%), Gaps = 4/488 (0%)
Frame = -3
Query: 1455 AGGVSAGGASRIEIDKELLCPICMQIMKGAFLTACGHSFCYKCINTHLENKDDCPCCGKS 1276
+GG+ G ++DK+LLCPICMQ++K AFLTACGHSFCY CI THL+NK DCPCC +
Sbjct: 37 SGGLEIGAP---DLDKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLKNKSDCPCCSQH 93
Query: 1275 LSANQLFPNFVLDKLLKKASTRQIPKTVSTAEQFQWALQKGCEVSVKELDVLLSVLAERK 1096
L+ QL+PNF+LDKLLKK S R + KT S +QF+ ALQ+GC+VS+KE+D LL++LAE+K
Sbjct: 94 LTNKQLYPNFLLDKLLKKTSARHVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKK 153
Query: 1095 RILEREESERNMQIXXXXXXXXXXXRVDELKELQSDLEYVKEDINVVESSRIEKCRVRNK 916
R +E+EE+ERNMQI +VDEL E+Q+DL+Y+KEDIN VE RI+ R R++
Sbjct: 154 RKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDR 213
Query: 915 LSPELQMSRNDFSTTRSQFXXXXXXXXXXXXXXXXXXXXXSPWNFLYNKMAGKNQASALG 736
S +L+M +D ST + P NF K+ GK Q S+ G
Sbjct: 214 YSVKLRMLGDDPSTRNA--WPPEKSHTGFNSNSLSIRGGNPPANFQNKKVEGKAQGSSHG 271
Query: 735 PHKNDSISIPKPKHTSQSGLSLVRKKRVHSQFNELQECYLQKRRXXXXXXXXXXXXXQ-- 562
K D+ S + +QS +S+ RKKR+H+QF++LQECYLQKRR
Sbjct: 272 ISKKDAQSGSDSQSLNQSSVSMARKKRIHAQFSDLQECYLQKRRQLVDQPHSNQESDNSV 331
Query: 561 --REGYSAALSDFQSVLTTFTRYSRMRVIAEVKHGDLMHTNNIVSSIEFDRDDELFATAG 388
REGYS L+DFQSVLTTFTRYSR+RVIAE++HGD+ H+ NIVSSIEFDRDDELFATAG
Sbjct: 332 VRREGYSYGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAG 391
Query: 387 VLRCIKVFDFASVVNEPARLHLPVVELSTQFKLSCLSWNKYTKNSLASSDYEGIVTVWDM 208
V RCIKVFDF+SVVNEPA + P+VE+ST+ KLSCLSWNK+ KN +ASSDYEGIVTVWD+
Sbjct: 392 VSRCIKVFDFSSVVNEPADIQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDV 451
Query: 207 NTKQSVIEYEEHEKRAWSVDFSCTEPSMLVSGGDDCKVKVWSTKQESSVLNIDMKANICC 28
T+QS++EYEEHEKRAWSVDFS TEPSMLVSG DDCKVKVW TKQE+SVLNIDMKANICC
Sbjct: 452 TTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICC 511
Query: 27 VKYNPGSS 4
VKYNPGSS
Sbjct: 512 VKYNPGSS 519
>ref|XP_002321154.1| predicted protein [Populus trichocarpa] gi|222861927|gb|EEE99469.1|
predicted protein [Populus trichocarpa]
Length = 672
Score = 579 bits (1492), Expect = e-163
Identities = 300/506 (59%), Positives = 363/506 (71%), Gaps = 4/506 (0%)
Frame = -3
Query: 1509 AAETEMKASSSDLMSSELAGGVSAGGASRIEIDKELLCPICMQIMKGAFLTACGHSFCYK 1330
A + E K S+S + SA A E++K+ LCPICMQI+K AFLT CGHSFCY
Sbjct: 12 AVKPEPKPSTSTAAAVASPEPSSAPSAEEAELEKDFLCPICMQIIKDAFLTVCGHSFCYM 71
Query: 1329 CINTHLENKDDCPCCGKSLSANQLFPNFVLDKLLKKASTRQIPKTVSTAEQFQWALQKGC 1150
CI THL NK+DCPCC L+ NQLFPNF+L KLLKKAS RQ K S E F+ +LQ+GC
Sbjct: 72 CITTHLRNKNDCPCCSHYLTTNQLFPNFLLQKLLKKASARQTSKNASPIEHFRQSLQQGC 131
Query: 1149 EVSVKELDVLLSVLAERKRILEREESERNMQIXXXXXXXXXXXRVDELKELQSDLEYVKE 970
EVS+K+LD L+S+LAERKR +E+EE+ERNMQ+ +VDEL E+++DL Y+KE
Sbjct: 132 EVSIKDLDTLMSLLAERKRKMEQEEAERNMQVLLDFLHYLRKQKVDELNEVRTDLRYIKE 191
Query: 969 DINVVESSRIEKCRVRNKLSPELQMSRNDFSTTRSQFXXXXXXXXXXXXXXXXXXXXXSP 790
DI+ VE RIE R R++ S +L+M +D T R + +
Sbjct: 192 DIDAVEKHRIELYRARDRYSMKLRMLGDDL-TVRKPWPSTIDKNHSGVVTSSLNARGLTT 250
Query: 789 WNFLYNKMAGKNQASALGPHKNDSISIPKPKHTSQSGLSLVRKKRVHSQFNELQECYLQK 610
N KM GK Q S+ G + D+ P++ + SGLS V+KKRVH+QFN+LQ+CYLQK
Sbjct: 251 GNIPIKKMDGKAQVSSHGLQRKDTSGGSDPQY-NHSGLSAVKKKRVHAQFNDLQDCYLQK 309
Query: 609 RRXXXXXXXXXXXXXQ----REGYSAALSDFQSVLTTFTRYSRMRVIAEVKHGDLMHTNN 442
RR + REGY+A L+DFQSVL TFT+YSR+RVIAE++HGD+ H+ N
Sbjct: 310 RRQLANHPHNQSERDKNVIHREGYNAGLADFQSVLGTFTQYSRLRVIAELRHGDIFHSAN 369
Query: 441 IVSSIEFDRDDELFATAGVLRCIKVFDFASVVNEPARLHLPVVELSTQFKLSCLSWNKYT 262
IVSSIEFDRDDE FATAGV R IKVFDF+SVVNEPA +H PVVE+ST+ KLSCLSWNK+T
Sbjct: 370 IVSSIEFDRDDEFFATAGVSRRIKVFDFSSVVNEPADVHCPVVEMSTRSKLSCLSWNKFT 429
Query: 261 KNSLASSDYEGIVTVWDMNTKQSVIEYEEHEKRAWSVDFSCTEPSMLVSGGDDCKVKVWS 82
KN +ASSDYEGIVTVWD+ T+QSV+EYEEHEKRAWSVDFS TEPSMLVSG DDCKVKVW
Sbjct: 430 KNQIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWC 489
Query: 81 TKQESSVLNIDMKANICCVKYNPGSS 4
TKQE+SVLNIDMKANICCVKYNPGSS
Sbjct: 490 TKQEASVLNIDMKANICCVKYNPGSS 515