BLASTX nr result

ID: Bupleurum21_contig00009686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009686
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   567   e-159
ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ...   566   e-159
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   552   e-155
ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicag...   551   e-155

>ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus] gi|449476660|ref|XP_004154799.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus]
          Length = 505

 Score =  567 bits (1461), Expect = e-159
 Identities = 278/291 (95%), Positives = 288/291 (98%)
 Frame = -3

Query: 875 EIEKAGFSEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDG 696
           EI KAGF+EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP L+PGDG
Sbjct: 113 EIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDG 172

Query: 695 PIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 516
           PIVLVLAPTRELAVQIQQEATKFGASSKIK+TC+YGGVPKGPQVRDLQKGVEIVIATPGR
Sbjct: 173 PIVLVLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGR 232

Query: 515 LIDMLETHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 336
           LIDM+E+HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE
Sbjct: 233 LIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 292

Query: 335 QLARQFLYNPYKVVIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 156
           QLARQFLYNPYKV+IGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD
Sbjct: 293 QLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 352

Query: 155 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 3
           TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDV
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403


>ref|XP_002327540.1| predicted protein [Populus trichocarpa] gi|222836094|gb|EEE74515.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  567 bits (1460), Expect = e-159
 Identities = 279/291 (95%), Positives = 287/291 (98%)
 Frame = -3

Query: 875 EIEKAGFSEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDG 696
           EI KAGF+EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI+HVNAQPFLAPGDG
Sbjct: 105 EISKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIIHVNAQPFLAPGDG 164

Query: 695 PIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 516
           PIVLVLAPTRELAVQIQQEA KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGR
Sbjct: 165 PIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGR 224

Query: 515 LIDMLETHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 336
           LIDM+E+HHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVE
Sbjct: 225 LIDMMESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVE 284

Query: 335 QLARQFLYNPYKVVIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 156
           QLARQ LYNPYKV+IGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD
Sbjct: 285 QLARQSLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 344

Query: 155 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 3
           TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV
Sbjct: 345 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 395


>ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 505

 Score =  566 bits (1459), Expect = e-159
 Identities = 281/291 (96%), Positives = 286/291 (98%)
 Frame = -3

Query: 875 EIEKAGFSEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDG 696
           E+ +AGF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP LAPGDG
Sbjct: 113 EVTRAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDG 172

Query: 695 PIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 516
           PIVLVLAPTRELAVQIQQEATKFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGR
Sbjct: 173 PIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGR 232

Query: 515 LIDMLETHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 336
           LIDMLE+HHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE
Sbjct: 233 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 292

Query: 335 QLARQFLYNPYKVVIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 156
           QLARQFLYNPYKVVIGS DLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD
Sbjct: 293 QLARQFLYNPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 352

Query: 155 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 3
           TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403


>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
           gi|297743075|emb|CBI35942.3| unnamed protein product
           [Vitis vinifera]
          Length = 506

 Score =  552 bits (1423), Expect = e-155
 Identities = 272/291 (93%), Positives = 284/291 (97%)
 Frame = -3

Query: 875 EIEKAGFSEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDG 696
           EI KAGF+EPT IQAQGWPMALKGRD+IGIAETGSGKTLAYLLPAI+HVNAQP LAPGDG
Sbjct: 114 EITKAGFAEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAPGDG 173

Query: 695 PIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 516
           PIVLVLAPTRELAVQIQQEA KFGASS+IK+TCI+GGVPKGPQ+RDLQKGVEIVIATPGR
Sbjct: 174 PIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGR 233

Query: 515 LIDMLETHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 336
           LIDMLE+HHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVE
Sbjct: 234 LIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVE 293

Query: 335 QLARQFLYNPYKVVIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 156
           QLAR+FLYNP KVVIGS DLKANHAIRQHV+IVSENQKYN+LVKLLEDIMDG RILIFMD
Sbjct: 294 QLARKFLYNPCKVVIGSADLKANHAIRQHVEIVSENQKYNRLVKLLEDIMDGGRILIFMD 353

Query: 155 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 3
           TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV
Sbjct: 354 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 404


>ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent
           RNA helicase [Medicago truncatula]
           gi|124360402|gb|ABN08415.1| Helicase, C-terminal
           [Medicago truncatula] gi|355486667|gb|AES67870.1|
           DEAD-box ATP-dependent RNA helicase [Medicago
           truncatula] gi|355502353|gb|AES83556.1| DEAD-box
           ATP-dependent RNA helicase [Medicago truncatula]
          Length = 499

 Score =  551 bits (1421), Expect = e-155
 Identities = 272/291 (93%), Positives = 284/291 (97%)
 Frame = -3

Query: 875 EIEKAGFSEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDG 696
           E++KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP L PGDG
Sbjct: 109 EVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDG 168

Query: 695 PIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 516
           PIVLVLAPTRELAVQIQQEATKFGASS+IKSTCIYGGVPKGPQVRDLQKGVEI+IATPGR
Sbjct: 169 PIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGR 228

Query: 515 LIDMLETHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 336
           LIDMLE++HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE
Sbjct: 229 LIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 288

Query: 335 QLARQFLYNPYKVVIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 156
           QLARQFLYNPYKV+IGS DLKANHAI+Q+VDIV E QKY+KLVKLLEDIMDGSRILIFMD
Sbjct: 289 QLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD 348

Query: 155 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 3
           TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDV
Sbjct: 349 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDV 399


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