BLASTX nr result

ID: Bupleurum21_contig00009629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009629
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]                 144   7e-33
ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...   141   5e-32
gb|AEL98754.1| translocon-associated protein, partial [Silene la...   141   6e-32
gb|AEL98753.1| translocon-associated protein, partial [Silene la...   141   6e-32
ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [...   141   6e-32

>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
          Length = 271

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/81 (82%), Positives = 74/81 (91%)
 Frame = -3

Query: 413 FFRFHVVIGMLLEISLQVIGLVSRRWLPQAAYWGKVGMHFWTGFAFAFLFTVLESMRCAL 234
           F+RFHVVIGMLLEI+LQVIG +SR W+P A YWGKVGMHFWT  AFA+LFTVLES+RCAL
Sbjct: 192 FYRFHVVIGMLLEIALQVIGTISR-WMPLAVYWGKVGMHFWTAVAFAYLFTVLESIRCAL 250

Query: 233 AGMYADIPFVSDAAYIQIPYD 171
           AGMYAD+PFV DAAYIQIPYD
Sbjct: 251 AGMYADVPFVCDAAYIQIPYD 271


>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
           gi|223551137|gb|EEF52623.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = -3

Query: 413 FFRFHVVIGMLLEISLQVIGLVSRRWLPQAAYWGKVGMHFWTGFAFAFLFTVLESMRCAL 234
           FFRFHVV+GMLLEI+LQVIG VSR W+P A YWGKVGMHFWT  AFA+LFTVLE +RCAL
Sbjct: 197 FFRFHVVMGMLLEIALQVIGTVSR-WMPLAVYWGKVGMHFWTAIAFAYLFTVLECIRCAL 255

Query: 233 AGMYADIPFVSDAAYIQIPYD 171
           AGMYAD+PF  DAAYIQIPYD
Sbjct: 256 AGMYADVPFACDAAYIQIPYD 276


>gb|AEL98754.1| translocon-associated protein, partial [Silene latifolia]
          Length = 266

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -3

Query: 413 FFRFHVVIGMLLEISLQVIGLVSRRWLPQAAYWGKVGMHFWTGFAFAFLFTVLESMRCAL 234
           FFRFHVV+GMLLEI+LQVIG +SR W+P A YWGK GMHFWT  AF +LFTVLE+MRCAL
Sbjct: 187 FFRFHVVMGMLLEIALQVIGTISR-WMPLAVYWGKFGMHFWTAVAFGYLFTVLEAMRCAL 245

Query: 233 AGMYADIPFVSDAAYIQIPYD 171
           AGMYAD+PFV DAAYIQIPYD
Sbjct: 246 AGMYADVPFVCDAAYIQIPYD 266


>gb|AEL98753.1| translocon-associated protein, partial [Silene latifolia]
          Length = 266

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = -3

Query: 413 FFRFHVVIGMLLEISLQVIGLVSRRWLPQAAYWGKVGMHFWTGFAFAFLFTVLESMRCAL 234
           FFRFHVV+GMLLEI+LQVIG +SR W+P A YWGK GMHFWT  AF +LFTVLE+MRCAL
Sbjct: 187 FFRFHVVMGMLLEIALQVIGTISR-WMPLAVYWGKFGMHFWTAVAFGYLFTVLEAMRCAL 245

Query: 233 AGMYADIPFVSDAAYIQIPYD 171
           AGMYAD+PFV DAAYIQIPYD
Sbjct: 246 AGMYADVPFVCDAAYIQIPYD 266


>ref|XP_002281211.1| PREDICTED: protein TIC 20-I, chloroplastic [Vitis vinifera]
           gi|302142547|emb|CBI19750.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/81 (81%), Positives = 72/81 (88%)
 Frame = -3

Query: 413 FFRFHVVIGMLLEISLQVIGLVSRRWLPQAAYWGKVGMHFWTGFAFAFLFTVLESMRCAL 234
           FFRFHVV+GMLLEI+LQVIG +SR W+P A YWGKVGMHFWT  AF +LFTVLE +RCAL
Sbjct: 193 FFRFHVVMGMLLEIALQVIGTISR-WMPLAVYWGKVGMHFWTAVAFGYLFTVLECIRCAL 251

Query: 233 AGMYADIPFVSDAAYIQIPYD 171
           AGMYADIPFV DAAYIQIPYD
Sbjct: 252 AGMYADIPFVCDAAYIQIPYD 272


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